RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 VEZTQ9HBM0 779 aa19.1■□□□□ 0.65
COL1A1-204ENST00000474644 MYH2Q9UKX2 1941 aa19.1■□□□□ 0.65
COL1A1-204ENST00000474644 GPR75-ASB3A0A0A6YYF3 556 aa19.09■□□□□ 0.65
COL1A1-204ENST00000474644 ITGBL1O95965 494 aaPredicted RBP19.09■□□□□ 0.65
COL1A1-204ENST00000474644 CYP7A1P22680 504 aa19.09■□□□□ 0.65
COL1A1-204ENST00000474644 SLC9C2Q5TAH2 1124 aa19.09■□□□□ 0.65
COL1A1-204ENST00000474644 CDC42EP5Q6NZY7 148 aa19.09■□□□□ 0.65
COL1A1-204ENST00000474644 TMED8Q6PL24 325 aaPredicted RBP19.09■□□□□ 0.65
COL1A1-204ENST00000474644 CDC37L1Q7L3B6 337 aa19.09■□□□□ 0.65
COL1A1-204ENST00000474644 USP48Q86UV5 1035 aa19.09■□□□□ 0.65
COL1A1-204ENST00000474644 SULF1Q8IWU6 871 aa19.09■□□□□ 0.65
COL1A1-204ENST00000474644 KBTBD3Q8NAB2 608 aa19.09■□□□□ 0.65
COL1A1-204ENST00000474644 SCAF8Q9UPN6 1271 aaKnown RBP19.09■□□□□ 0.65
COL1A1-204ENST00000474644 RFX7Q2KHR2 1363 aa19.08■□□□□ 0.65
COL1A1-204ENST00000474644 PASKQ96RG2 1323 aa19.08■□□□□ 0.65
COL1A1-204ENST00000474644 TRAF5O00463 557 aa19.08■□□□□ 0.64
COL1A1-204ENST00000474644 CACNB3P54284 484 aa19.08■□□□□ 0.64
COL1A1-204ENST00000474644 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.08■□□□□ 0.64
COL1A1-204ENST00000474644 ZNF532Q9HCE3 1301 aa19.07■□□□□ 0.64
COL1A1-204ENST00000474644 TCRBV5S4A2TA0A5A2 114 aa19.07■□□□□ 0.64
COL1A1-204ENST00000474644 ADD2P35612 726 aa19.07■□□□□ 0.64
COL1A1-204ENST00000474644 APLP1P51693 650 aa19.07■□□□□ 0.64
COL1A1-204ENST00000474644 DLK2Q6UY11 383 aa19.07■□□□□ 0.64
COL1A1-204ENST00000474644 USP40Q9NVE5 1235 aa19.07■□□□□ 0.64
COL1A1-204ENST00000474644 TMOD2Q9NZR1 351 aa19.07■□□□□ 0.64
COL1A1-204ENST00000474644 CHGBP05060 677 aa19.06■□□□□ 0.64
COL1A1-204ENST00000474644 RHBDL3P58872 404 aa19.06■□□□□ 0.64
COL1A1-204ENST00000474644 FMR1Q06787 632 aaKnown RBP eCLIP19.06■□□□□ 0.64
COL1A1-204ENST00000474644 MIGA1Q8NAN2 632 aa19.06■□□□□ 0.64
COL1A1-204ENST00000474644 NOL10Q9BSC4 688 aaKnown RBP19.06■□□□□ 0.64
COL1A1-204ENST00000474644 AATFQ9NY61 560 aaKnown RBP eCLIP19.06■□□□□ 0.64
COL1A1-204ENST00000474644 CNTNAP1P78357 1384 aa19.06■□□□□ 0.64
COL1A1-204ENST00000474644 TCP10L2B9ZVM9 353 aa19.05■□□□□ 0.64
COL1A1-204ENST00000474644 BAG3O95817 575 aa19.05■□□□□ 0.64
COL1A1-204ENST00000474644 NFIAQ12857 509 aa19.05■□□□□ 0.64
COL1A1-204ENST00000474644 TNFAIP1Q13829 316 aa19.05■□□□□ 0.64
COL1A1-204ENST00000474644 SLFNL1Q499Z3 407 aa19.05■□□□□ 0.64
COL1A1-204ENST00000474644 FKBP1CQ5VVH2 108 aa19.05■□□□□ 0.64
COL1A1-204ENST00000474644 ZSCAN25Q6NSZ9 544 aa19.05■□□□□ 0.64
COL1A1-204ENST00000474644 SKAP1Q86WV1 359 aa19.05■□□□□ 0.64
COL1A1-204ENST00000474644 EVI5LQ96CN4 794 aa19.05■□□□□ 0.64
COL1A1-204ENST00000474644 FSD1Q9BTV5 496 aa19.05■□□□□ 0.64
COL1A1-204ENST00000474644 DEFB129Q9H1M3 183 aa19.05■□□□□ 0.64
COL1A1-204ENST00000474644 PPP4CP60510 307 aa19.04■□□□□ 0.64
COL1A1-204ENST00000474644 DYNLL1P63167 89 aaKnown RBP19.04■□□□□ 0.64
COL1A1-204ENST00000474644 UBE3CQ15386 1083 aa19.04■□□□□ 0.64
COL1A1-204ENST00000474644 TTC22Q5TAA0 569 aa19.04■□□□□ 0.64
COL1A1-204ENST00000474644 SH3RF3Q8TEJ3 882 aaPredicted RBP19.04■□□□□ 0.64
COL1A1-204ENST00000474644 CDCA5Q96FF9 252 aa19.04■□□□□ 0.64
COL1A1-204ENST00000474644 PPP2R3BQ9Y5P8 575 aa19.04■□□□□ 0.64
COL1A1-204ENST00000474644 WDHD1O75717 1129 aaPredicted RBP19.03■□□□□ 0.64
COL1A1-204ENST00000474644 TNNI2P48788 182 aa19.03■□□□□ 0.64
COL1A1-204ENST00000474644 RASA3Q14644 834 aa19.03■□□□□ 0.64
COL1A1-204ENST00000474644 RIOK1Q9BRS2 568 aaKnown RBP19.03■□□□□ 0.64
COL1A1-204ENST00000474644 IDI2Q9BXS1 227 aa19.03■□□□□ 0.64
COL1A1-204ENST00000474644 MYH7P12883 1935 aa19.03■□□□□ 0.64
COL1A1-204ENST00000474644 TRIM6-TRIM34B2RNG4 842 aa19.02■□□□□ 0.64
COL1A1-204ENST00000474644 RNF113AO15541 343 aaKnown RBP19.02■□□□□ 0.64
COL1A1-204ENST00000474644 ZFYP08048 801 aaPredicted RBP19.02■□□□□ 0.64
COL1A1-204ENST00000474644 GSPT1P15170 499 aaKnown RBP19.02■□□□□ 0.64
COL1A1-204ENST00000474644 PLCG2P16885 1265 aa19.02■□□□□ 0.64
COL1A1-204ENST00000474644 PRAMEF18Q5VWM3 479 aa19.02■□□□□ 0.64
COL1A1-204ENST00000474644 FAM83AQ86UY5 434 aa19.02■□□□□ 0.64
COL1A1-204ENST00000474644 TEX11Q8IYF3 940 aa19.02■□□□□ 0.64
COL1A1-204ENST00000474644 TMEM39BQ9GZU3 492 aa19.02■□□□□ 0.64
COL1A1-204ENST00000474644 DDX4Q9NQI0 724 aaKnown RBP19.02■□□□□ 0.64
COL1A1-204ENST00000474644 FAM198AQ9UFP1 575 aa19.02■□□□□ 0.64
COL1A1-204ENST00000474644 RPAP1Q9BWH6 1393 aaPredicted RBP19.02■□□□□ 0.64
COL1A1-204ENST00000474644 SSC5DA1L4H1 1573 aa19.02■□□□□ 0.63
COL1A1-204ENST00000474644 MAGEB6P1A0A0J9YX57 407 aa19.01■□□□□ 0.63
COL1A1-204ENST00000474644 RGS3P49796 1198 aa19.01■□□□□ 0.63
COL1A1-204ENST00000474644 LRRFIP1Q32MZ4 808 aaKnown RBP19.01■□□□□ 0.63
COL1A1-204ENST00000474644 CERS3Q8IU89 383 aa19.01■□□□□ 0.63
COL1A1-204ENST00000474644 CDAN1Q8IWY9 1227 aa19.01■□□□□ 0.63
COL1A1-204ENST00000474644 ZNF408Q9H9D4 720 aa19.01■□□□□ 0.63
COL1A1-204ENST00000474644 ENTPD3O75355 529 aa19■□□□□ 0.63
COL1A1-204ENST00000474644 MBD4O95243 580 aa19■□□□□ 0.63
COL1A1-204ENST00000474644 CELF2O95319 508 aaKnown RBP19■□□□□ 0.63
COL1A1-204ENST00000474644 PICALMQ13492 652 aa19■□□□□ 0.63
COL1A1-204ENST00000474644 LCORLQ8N3X6 602 aa19■□□□□ 0.63
COL1A1-204ENST00000474644 FAM151AQ8WW52 585 aa19■□□□□ 0.63
COL1A1-204ENST00000474644 APPBP2Q92624 585 aa19■□□□□ 0.63
COL1A1-204ENST00000474644 RILPL2Q969X0 211 aa19■□□□□ 0.63
COL1A1-204ENST00000474644 TEPSINQ96N21 525 aa19■□□□□ 0.63
COL1A1-204ENST00000474644 POLR2AP24928 1970 aaKnown RBP19■□□□□ 0.63
COL1A1-204ENST00000474644 PCNTO95613 3336 aa18.99■□□□□ 0.63
COL1A1-204ENST00000474644 HTRA3P83110 453 aa18.99■□□□□ 0.63
COL1A1-204ENST00000474644 TCP10Q12799 353 aa18.99■□□□□ 0.63
COL1A1-204ENST00000474644 DNAJC5GQ8N7S2 189 aa18.99■□□□□ 0.63
COL1A1-204ENST00000474644 PUS7LQ9H0K6 701 aaKnown RBP18.99■□□□□ 0.63
COL1A1-204ENST00000474644 ARMT1Q9H993 441 aa18.99■□□□□ 0.63
COL1A1-204ENST00000474644 COL2A1P02458 1487 aaPredicted RBP18.98■□□□□ 0.63
COL1A1-204ENST00000474644 NPM3O75607 178 aaKnown RBP18.98■□□□□ 0.63
COL1A1-204ENST00000474644 ZMYM1Q5SVZ6 1142 aa18.98■□□□□ 0.63
COL1A1-204ENST00000474644 NBPF12Q5TAG4 269 aaPredicted RBP18.98■□□□□ 0.63
COL1A1-204ENST00000474644 CST9Q5W186 159 aa18.98■□□□□ 0.63
COL1A1-204ENST00000474644 TICAM2Q86XR7 235 aa18.98■□□□□ 0.63
COL1A1-204ENST00000474644 ZFPM1Q8IX07 1006 aa18.98■□□□□ 0.63
COL1A1-204ENST00000474644 OSBP2Q969R2 916 aa18.98■□□□□ 0.63
COL1A1-204ENST00000474644 FLT1P17948 1338 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms