RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 BRAPQ7Z569 592 aa13.95□□□□□ -0.18
VARS2-205ENST00000469358 INTS13Q9NVM9 706 aa13.95□□□□□ -0.18
VARS2-205ENST00000469358 KCNJ14Q9UNX9 436 aa13.95□□□□□ -0.18
VARS2-205ENST00000469358 PCDHA5Q9Y5H7 936 aa13.95□□□□□ -0.18
VARS2-205ENST00000469358 CTDSPL2Q05D32 466 aa13.95□□□□□ -0.18
VARS2-205ENST00000469358 PTPAQ15257 358 aa13.95□□□□□ -0.18
VARS2-205ENST00000469358 TOM1L2Q6ZVM7 507 aa13.95□□□□□ -0.18
VARS2-205ENST00000469358 L2HGDHQ9H9P8 463 aa13.95□□□□□ -0.18
VARS2-205ENST00000469358 WWC3Q9ULE0 1092 aa13.95□□□□□ -0.18
VARS2-205ENST00000469358 CCDC93Q567U6 631 aa13.95□□□□□ -0.18
VARS2-205ENST00000469358 CARD6Q9BX69 1037 aa13.95□□□□□ -0.18
VARS2-205ENST00000469358 GREM2Q9H772 168 aa13.95□□□□□ -0.18
VARS2-205ENST00000469358 A0A0U1RQG5 324 aaPredicted RBP13.94□□□□□ -0.18
VARS2-205ENST00000469358 ADKP55263 362 aaKnown RBP13.94□□□□□ -0.18
VARS2-205ENST00000469358 TRDNQ13061 729 aa13.94□□□□□ -0.18
VARS2-205ENST00000469358 APOA5Q6Q788 366 aa13.94□□□□□ -0.18
VARS2-205ENST00000469358 ANGEL1Q9UNK9 670 aaKnown RBP13.94□□□□□ -0.18
VARS2-205ENST00000469358 TACC3Q9Y6A5 838 aa13.94□□□□□ -0.18
VARS2-205ENST00000469358 CIAO1O76071 339 aa13.94□□□□□ -0.18
VARS2-205ENST00000469358 PRR29P0C7W0 189 aa13.94□□□□□ -0.18
VARS2-205ENST00000469358 TPM4P67936 248 aa13.94□□□□□ -0.18
VARS2-205ENST00000469358 RRP12Q5JTH9 1297 aaKnown RBP13.94□□□□□ -0.18
VARS2-205ENST00000469358 TRIM65Q6PJ69 517 aa13.94□□□□□ -0.18
VARS2-205ENST00000469358 LDHAL6AQ6ZMR3 332 aa13.94□□□□□ -0.18
VARS2-205ENST00000469358 DESI2Q9BSY9 194 aa13.94□□□□□ -0.18
VARS2-205ENST00000469358 SLC26A6Q9BXS9 759 aa13.94□□□□□ -0.18
VARS2-205ENST00000469358 C19orf44Q9H6X5 657 aa13.94□□□□□ -0.18
VARS2-205ENST00000469358 ETF1P62495 437 aaKnown RBP13.93□□□□□ -0.18
VARS2-205ENST00000469358 IFIT5Q13325 482 aaKnown RBP13.93□□□□□ -0.18
VARS2-205ENST00000469358 HLFQ16534 295 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 BPIFA3Q9BQP9 254 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 BTBD18B2RXH4 712 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 MYL5Q02045 173 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 USP49Q70CQ1 688 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 CNNM3Q8NE01 707 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 ZCRB1Q8TBF4 217 aaKnown RBP13.93□□□□□ -0.18
VARS2-205ENST00000469358 MAP3K14Q99558 947 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 SEC31BQ9NQW1 1179 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 FHOD1Q9Y613 1164 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 ZNF532Q9HCE3 1301 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 CAMTA1Q9Y6Y1 1673 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 COBLO75128 1261 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 H2AFXP16104 143 aaPredicted RBP13.93□□□□□ -0.18
VARS2-205ENST00000469358 ATF3P18847 181 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 PHKA1P46020 1223 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 FMR1Q06787 632 aaKnown RBP eCLIP13.93□□□□□ -0.18
VARS2-205ENST00000469358 WDR24Q96S15 920 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 IRX2Q9BZI1 471 aaPredicted RBP13.93□□□□□ -0.18
VARS2-205ENST00000469358 STRN4Q9NRL3 753 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 TOMM22Q9NS69 142 aa13.93□□□□□ -0.18
VARS2-205ENST00000469358 FAM217BQ9NTX9 383 aaPredicted RBP13.93□□□□□ -0.18
VARS2-205ENST00000469358 A0A0U1RQJ8 604 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 PSDA5PKW4 1024 aaPredicted RBP13.92□□□□□ -0.18
VARS2-205ENST00000469358 SMIM22K7EJ46 135 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 SH2B2O14492 632 aaPredicted RBP13.92□□□□□ -0.18
VARS2-205ENST00000469358 POLR3GO15318 223 aaPredicted RBP13.92□□□□□ -0.18
VARS2-205ENST00000469358 TOP1P11387 765 aaKnown RBP13.92□□□□□ -0.18
VARS2-205ENST00000469358 CASP1P29466 404 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 REXO1L1PQ8IX06 675 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 DNAJC10Q8IXB1 793 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 ATRIPQ8WXE1 791 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 ZSWIM4Q9H7M6 989 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 TUBE1Q9UJT0 475 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 KCNH3Q9ULD8 1083 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 HPSEQ9Y251 543 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 ZMYM6O95789 1325 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 UBN2Q6ZU65 1347 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 ITGA6P23229 1130 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 GABPB1Q06547 395 aaPredicted RBP13.92□□□□□ -0.18
VARS2-205ENST00000469358 TCIRG1Q13488 830 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 TOGARAM2Q6ZUX3 1019 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 CNNM1Q9NRU3 951 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 GOLGA8AA7E2F4 631 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 IARSP41252 1262 aaKnown RBP13.92□□□□□ -0.18
VARS2-205ENST00000469358 FBXL16Q8N461 479 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 TRERF1Q96PN7 1200 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 ISCA1Q9BUE6 129 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 ASAP1Q9ULH1 1129 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 AKAP2Q9Y2D5 859 aa13.92□□□□□ -0.18
VARS2-205ENST00000469358 TRPM3Q9HCF6 1732 aaPredicted RBP13.91□□□□□ -0.18
VARS2-205ENST00000469358 hCG_1642624A0A1W2PR95 340 aa13.91□□□□□ -0.18
VARS2-205ENST00000469358 ZBTB43O43298 467 aa13.91□□□□□ -0.18
VARS2-205ENST00000469358 PRKAB2O43741 272 aa13.91□□□□□ -0.18
VARS2-205ENST00000469358 ADD2P35612 726 aa13.91□□□□□ -0.18
VARS2-205ENST00000469358 NR5A1Q13285 461 aa13.91□□□□□ -0.18
VARS2-205ENST00000469358 MTF1Q14872 753 aa13.91□□□□□ -0.18
VARS2-205ENST00000469358 KARSQ15046 597 aaKnown RBP13.91□□□□□ -0.18
VARS2-205ENST00000469358 TMEM67Q5HYA8 995 aa13.91□□□□□ -0.18
VARS2-205ENST00000469358 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.91□□□□□ -0.18
VARS2-205ENST00000469358 ZCCHC17Q9NP64 241 aaKnown RBP13.91□□□□□ -0.18
VARS2-205ENST00000469358 ZFYP08048 801 aaPredicted RBP13.91□□□□□ -0.18
VARS2-205ENST00000469358 UBXN4Q92575 508 aa13.91□□□□□ -0.18
VARS2-205ENST00000469358 KCND1Q9NSA2 647 aa13.91□□□□□ -0.18
VARS2-205ENST00000469358 CPDO75976 1380 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 PNMA6AP0CW24 399 aaPredicted RBP13.9□□□□□ -0.18
VARS2-205ENST00000469358 NTRK3Q16288 839 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 KRBA2Q6ZNG9 492 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 VSTM4Q8IW00 320 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 MNS1Q8NEH6 495 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 FAM53CQ9NYF3 392 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms