RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 CCDC172P0C7W6 258 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 TICAM2Q86XR7 235 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CEP57L1Q8IYX8 460 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NBPF15Q8N660 670 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 STAMBPO95630 424 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CEP135Q66GS9 1140 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 RUFY4Q6ZNE9 571 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 RPAP2Q8IXW5 612 aaPredicted RBP7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 KRT222Q8N1A0 295 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ZSCAN31Q96LW9 406 aaPredicted RBP7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 LARP6Q9BRS8 491 aaKnown RBP7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NOP56O00567 594 aaKnown RBP7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 IDH1O75874 414 aaKnown RBP7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ACTN1P12814 892 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 AMPD3Q01432 767 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 MFSD14CQ5VZR4 134 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 TSNARE1Q96NA8 513 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 F8W8V4 182 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 KIF2AO00139 706 aaPredicted RBP7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 GNAT2P19087 354 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NUCB1Q02818 461 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SFSWAPQ12872 951 aaKnown RBP7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NONOQ15233 471 aaKnown RBP eCLIP7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 FMNL3Q8IVF7 1028 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 AZI2Q9H6S1 392 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 C6orf50Q9HD87 102 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 PARP4Q9UKK3 1724 aaKnown RBP7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NBPF26B4DH59 902 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 MAP3K7O43318 606 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 GTPBP6O43824 516 aaPredicted RBP7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 URI1O94763 535 aaPredicted RBP7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CCDC181Q5TID7 509 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 GIMAP6Q6P9H5 292 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ABI1Q8IZP0 508 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ELMOD1Q8N336 334 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 GPATCH11Q8N954 259 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 GTF3C6Q969F1 213 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 BICD1Q96G01 975 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 RBSNQ9H1K0 784 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 IL1RAPL2Q9NP60 686 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 TNNQ9UQP3 1299 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 PAXBP1Q9Y5B6 917 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NWD2Q9ULI1 1742 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 PER1O15534 1290 aaPredicted RBP7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CCDC129Q6ZRS4 1044 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SMARCC2Q8TAQ2 1214 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SAMM50Q9Y512 469 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 KIAA0754O94854 1291 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 YY1P25490 414 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SEPT7Q16181 437 aaKnown RBP7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ZNF449Q6P9G9 518 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 DAAM2Q86T65 1068 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 PNMA8AQ86V59 439 aaPredicted RBP7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SLC8A2Q9UPR5 921 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 EXOC6BQ9Y2D4 811 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ATRNO75882 1429 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 KIF11P52732 1056 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 HDAC1Q13547 482 aaPredicted RBP7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 RC3H1Q5TC82 1133 aaKnown RBP7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 C1orf228Q6PIY5 440 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CCDC77Q9BR77 488 aa7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CACYBPQ9HB71 228 aaKnown RBP7.11□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CBFA2T2O43439 604 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NUTM1Q86Y26 1132 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SLC10A4Q96EP9 437 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CFAP45Q9UL16 551 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 DENND2AQ9ULE3 1009 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 STX6O43752 255 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 FKBP4Q02790 459 aaKnown RBP eCLIP7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 THUMPD2Q9BTF0 503 aaKnown RBP7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 G3BP2Q9UN86 482 aaKnown RBP7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CNPY2Q9Y2B0 182 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CARNS1A5YM72 827 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SFPQP23246 707 aaKnown RBP eCLIP7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 EIF5P55010 431 aaKnown RBP7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 REM2Q8IYK8 340 aaPredicted RBP7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 HTATIP2Q9BUP3 242 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 TMX1Q9H3N1 280 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NRKQ7Z2Y5 1582 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 MYO3BQ8WXR4 1341 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 COL5A2P05997 1499 aaPredicted RBP7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 PPFIBP1Q86W92 1011 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 WDR66Q8TBY9 1149 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SREK1Q8WXA9 508 aaKnown RBP7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 TMX3Q96JJ7 454 aa7.1□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ALDH1A1P00352 501 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ATP2B4P23634 1241 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CASQ1P31415 396 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 PTGDRQ13258 359 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 BLOC1S2Q6QNY1 142 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 AACSQ86V21 672 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 TMTC2Q8N394 836 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 TYW5A2RUC4 315 aaKnown RBP7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ALDH1L1O75891 902 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 GAS8O95995 478 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SSBP05455 408 aaKnown RBP eCLIP7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ZFYP08048 801 aaPredicted RBP7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 MX1P20591 662 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms