RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.41■■□□□ 1.34
NCL-205ENST00000453992 MAP4K4O95819 1239 aaPredicted RBP23.4■■□□□ 1.34
NCL-205ENST00000453992 ITGBL1O95965 494 aaPredicted RBP23.4■■□□□ 1.34
NCL-205ENST00000453992 PDE4AP27815 886 aa23.4■■□□□ 1.34
NCL-205ENST00000453992 KBTBD3Q8NAB2 608 aa23.4■■□□□ 1.34
NCL-205ENST00000453992 TDRD3Q9H7E2 651 aaKnown RBP23.4■■□□□ 1.34
NCL-205ENST00000453992 TMOD2Q9NZR1 351 aa23.4■■□□□ 1.34
NCL-205ENST00000453992 ZNF70Q9UC06 446 aaPredicted RBP23.4■■□□□ 1.34
NCL-205ENST00000453992 CDK5RAP2Q96SN8 1893 aa23.4■■□□□ 1.34
NCL-205ENST00000453992 FOCADQ5VW36 1801 aa23.4■■□□□ 1.34
NCL-205ENST00000453992 CLRN2A0PK11 232 aa23.39■■□□□ 1.33
NCL-205ENST00000453992 BTDP43251 543 aa23.39■■□□□ 1.33
NCL-205ENST00000453992 TNFAIP1Q13829 316 aa23.39■■□□□ 1.33
NCL-205ENST00000453992 FKBP1CQ5VVH2 108 aa23.39■■□□□ 1.33
NCL-205ENST00000453992 ZSCAN25Q6NSZ9 544 aa23.39■■□□□ 1.33
NCL-205ENST00000453992 MAGEB6Q8N7X4 407 aa23.39■■□□□ 1.33
NCL-205ENST00000453992 PASKQ96RG2 1323 aa23.38■■□□□ 1.33
NCL-205ENST00000453992 PDE6AP16499 860 aa23.38■■□□□ 1.33
NCL-205ENST00000453992 SLC9C2Q5TAH2 1124 aa23.38■■□□□ 1.33
NCL-205ENST00000453992 CERS3Q8IU89 383 aa23.38■■□□□ 1.33
NCL-205ENST00000453992 NOL10Q9BSC4 688 aaKnown RBP23.38■■□□□ 1.33
NCL-205ENST00000453992 GLIS2Q9BZE0 524 aaPredicted RBP23.38■■□□□ 1.33
NCL-205ENST00000453992 VEZTQ9HBM0 779 aa23.38■■□□□ 1.33
NCL-205ENST00000453992 PPP2R3BQ9Y5P8 575 aa23.38■■□□□ 1.33
NCL-205ENST00000453992 RFX7Q2KHR2 1363 aa23.38■■□□□ 1.33
NCL-205ENST00000453992 BAG3O95817 575 aa23.37■■□□□ 1.33
NCL-205ENST00000453992 CYP7A1P22680 504 aa23.37■■□□□ 1.33
NCL-205ENST00000453992 LRRFIP1Q32MZ4 808 aaKnown RBP23.37■■□□□ 1.33
NCL-205ENST00000453992 CDC42EP5Q6NZY7 148 aa23.37■■□□□ 1.33
NCL-205ENST00000453992 DNAJC5GQ8N7S2 189 aa23.37■■□□□ 1.33
NCL-205ENST00000453992 ADM5C9JUS6 153 aa23.36■■□□□ 1.33
NCL-205ENST00000453992 PLCG2P16885 1265 aa23.36■■□□□ 1.33
NCL-205ENST00000453992 ADD2P35612 726 aa23.36■■□□□ 1.33
NCL-205ENST00000453992 PPP4CP60510 307 aa23.36■■□□□ 1.33
NCL-205ENST00000453992 ADGRA1Q86SQ6 560 aa23.36■■□□□ 1.33
NCL-205ENST00000453992 USP48Q86UV5 1035 aa23.36■■□□□ 1.33
NCL-205ENST00000453992 TICAM2Q86XR7 235 aa23.36■■□□□ 1.33
NCL-205ENST00000453992 TCRBV5S4A2TA0A5A2 114 aa23.35■■□□□ 1.33
NCL-205ENST00000453992 ZFYP08048 801 aaPredicted RBP23.35■■□□□ 1.33
NCL-205ENST00000453992 TNNI2P48788 182 aa23.35■■□□□ 1.33
NCL-205ENST00000453992 UBE3CQ15386 1083 aa23.35■■□□□ 1.33
NCL-205ENST00000453992 FAM83AQ86UY5 434 aa23.35■■□□□ 1.33
NCL-205ENST00000453992 EVI5LQ96CN4 794 aa23.35■■□□□ 1.33
NCL-205ENST00000453992 USP40Q9NVE5 1235 aa23.35■■□□□ 1.33
NCL-205ENST00000453992 ZNF532Q9HCE3 1301 aa23.34■■□□□ 1.33
NCL-205ENST00000453992 RHBDL3P58872 404 aa23.34■■□□□ 1.33
NCL-205ENST00000453992 IDI2Q9BXS1 227 aa23.34■■□□□ 1.33
NCL-205ENST00000453992 DEFB129Q9H1M3 183 aa23.34■■□□□ 1.33
NCL-205ENST00000453992 RPAP1Q9BWH6 1393 aaPredicted RBP23.34■■□□□ 1.33
NCL-205ENST00000453992 TRAF5O00463 557 aa23.33■■□□□ 1.33
NCL-205ENST00000453992 FSD1Q9BTV5 496 aa23.33■■□□□ 1.33
NCL-205ENST00000453992 AATFQ9NY61 560 aaKnown RBP eCLIP23.33■■□□□ 1.33
NCL-205ENST00000453992 CNTNAP1P78357 1384 aa23.32■■□□□ 1.32
NCL-205ENST00000453992 NPM3O75607 178 aaKnown RBP23.32■■□□□ 1.32
NCL-205ENST00000453992 CACNB3P54284 484 aa23.32■■□□□ 1.32
NCL-205ENST00000453992 RASA3Q14644 834 aa23.32■■□□□ 1.32
NCL-205ENST00000453992 CDCA5Q96FF9 252 aa23.32■■□□□ 1.32
NCL-205ENST00000453992 TCP10L2B9ZVM9 353 aa23.31■■□□□ 1.32
NCL-205ENST00000453992 WDHD1O75717 1129 aaPredicted RBP23.31■■□□□ 1.32
NCL-205ENST00000453992 FMR1Q06787 632 aaKnown RBP eCLIP23.31■■□□□ 1.322e-10■□□□□ 8.9
NCL-205ENST00000453992 TTC22Q5TAA0 569 aa23.31■■□□□ 1.32
NCL-205ENST00000453992 SCAF8Q9UPN6 1271 aaKnown RBP23.31■■□□□ 1.32
NCL-205ENST00000453992 COL2A1P02458 1487 aaPredicted RBP23.3■■□□□ 1.32
NCL-205ENST00000453992 PAPPA2Q9BXP8 1791 aa23.3■■□□□ 1.32
NCL-205ENST00000453992 RNF113AO15541 343 aaKnown RBP23.3■■□□□ 1.32
NCL-205ENST00000453992 ENTPD3O75355 529 aa23.3■■□□□ 1.32
NCL-205ENST00000453992 NFIAQ12857 509 aa23.3■■□□□ 1.32
NCL-205ENST00000453992 TEX11Q8IYF3 940 aa23.3■■□□□ 1.32
NCL-205ENST00000453992 MIGA1Q8NAN2 632 aa23.3■■□□□ 1.32
NCL-205ENST00000453992 SH3RF3Q8TEJ3 882 aaPredicted RBP23.3■■□□□ 1.32
NCL-205ENST00000453992 FAM151AQ8WW52 585 aa23.3■■□□□ 1.32
NCL-205ENST00000453992 RIOK1Q9BRS2 568 aaKnown RBP23.3■■□□□ 1.32
NCL-205ENST00000453992 NAV1Q8NEY1 1877 aa23.3■■□□□ 1.32
NCL-205ENST00000453992 MAGEB6P1A0A0J9YX57 407 aa23.29■■□□□ 1.32
NCL-205ENST00000453992 TRIM6-TRIM34B2RNG4 842 aa23.29■■□□□ 1.32
NCL-205ENST00000453992 APPBP2Q92624 585 aa23.29■■□□□ 1.32
NCL-205ENST00000453992 FAM198AQ9UFP1 575 aa23.29■■□□□ 1.32
NCL-205ENST00000453992 DDX60LQ5H9U9 1706 aaKnown RBP23.28■■□□□ 1.32
NCL-205ENST00000453992 RGS3P49796 1198 aa23.28■■□□□ 1.32
NCL-205ENST00000453992 DYNLL1P63167 89 aaKnown RBP23.28■■□□□ 1.32
NCL-205ENST00000453992 TMEM39BQ9GZU3 492 aa23.28■■□□□ 1.32
NCL-205ENST00000453992 MYH1P12882 1939 aa23.27■■□□□ 1.32
NCL-205ENST00000453992 CELF2O95319 508 aaKnown RBP23.27■■□□□ 1.32
NCL-205ENST00000453992 GSPT1P15170 499 aaKnown RBP23.27■■□□□ 1.32
NCL-205ENST00000453992 NF2P35240 595 aa23.27■■□□□ 1.32
NCL-205ENST00000453992 SUPT20HL1Q3ZLR7 823 aa23.27■■□□□ 1.32
NCL-205ENST00000453992 TEPSINQ96N21 525 aa23.27■■□□□ 1.32
NCL-205ENST00000453992 SSC5DA1L4H1 1573 aa23.27■■□□□ 1.32
NCL-205ENST00000453992 DLK2Q6UY11 383 aa23.26■■□□□ 1.31
NCL-205ENST00000453992 RILPL2Q969X0 211 aa23.26■■□□□ 1.31
NCL-205ENST00000453992 HOOK2Q96ED9 719 aa23.26■■□□□ 1.31
NCL-205ENST00000453992 DDX4Q9NQI0 724 aaKnown RBP23.26■■□□□ 1.31
NCL-205ENST00000453992 ATRNL1Q5VV63 1379 aa23.26■■□□□ 1.31
NCL-205ENST00000453992 TMEM88BA6NKF7 163 aa23.25■■□□□ 1.31
NCL-205ENST00000453992 MBD4O95243 580 aa23.25■■□□□ 1.31
NCL-205ENST00000453992 CHGBP05060 677 aa23.25■■□□□ 1.31
NCL-205ENST00000453992 FKBP1BP68106 108 aa23.25■■□□□ 1.31
NCL-205ENST00000453992 PICALMQ13492 652 aa23.25■■□□□ 1.31
NCL-205ENST00000453992 SLFNL1Q499Z3 407 aa23.25■■□□□ 1.31
NCL-205ENST00000453992 CST9Q5W186 159 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms