RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 SETDB2Q96T68 719 aa8.39□□□□□ -1.07
VPS50-206ENST00000443443 OSBPL1AQ9BXW6 950 aa8.39□□□□□ -1.07
VPS50-206ENST00000443443 CD97P48960 835 aa8.38□□□□□ -1.07
VPS50-206ENST00000443443 MAP7Q14244 749 aa8.38□□□□□ -1.07
VPS50-206ENST00000443443 ALG1LQ6GMV1 187 aa8.38□□□□□ -1.07
VPS50-206ENST00000443443 INTS5Q6P9B9 1019 aaKnown RBP8.38□□□□□ -1.07
VPS50-206ENST00000443443 FBF1Q8TES7 1133 aa8.38□□□□□ -1.07
VPS50-206ENST00000443443 TBC1D32Q96NH3 1257 aa8.38□□□□□ -1.07
VPS50-206ENST00000443443 WDR18Q9BV38 432 aa8.38□□□□□ -1.07
VPS50-206ENST00000443443 CCDC86Q9H6F5 360 aaKnown RBP8.38□□□□□ -1.07
VPS50-206ENST00000443443 LGR6Q9HBX8 967 aa8.38□□□□□ -1.07
VPS50-206ENST00000443443 FAM105AQ9NUU6 356 aa8.38□□□□□ -1.07
VPS50-206ENST00000443443 LEMD3Q9Y2U8 911 aa8.38□□□□□ -1.07
VPS50-206ENST00000443443 PRR19A6NJB7 356 aa8.37□□□□□ -1.07
VPS50-206ENST00000443443 GSTP1P09211 210 aaKnown RBP8.37□□□□□ -1.07
VPS50-206ENST00000443443 HNRNPUQ00839 825 aaKnown RBP eCLIP8.37□□□□□ -1.07
VPS50-206ENST00000443443 FMR1Q06787 632 aaKnown RBP eCLIP8.37□□□□□ -1.07
VPS50-206ENST00000443443 WDR89Q96FK6 387 aaPredicted RBP8.37□□□□□ -1.07
VPS50-206ENST00000443443 CBX8Q9HC52 389 aa8.37□□□□□ -1.07
VPS50-206ENST00000443443 PPP1R9AQ9ULJ8 1098 aa8.37□□□□□ -1.07
VPS50-206ENST00000443443 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.36□□□□□ -1.07
VPS50-206ENST00000443443 F13BP05160 661 aa8.36□□□□□ -1.07
VPS50-206ENST00000443443 GSTT1P30711 240 aa8.36□□□□□ -1.07
VPS50-206ENST00000443443 SULF2Q8IWU5 870 aa8.36□□□□□ -1.07
VPS50-206ENST00000443443 SHISA5Q8N114 240 aa8.36□□□□□ -1.07
VPS50-206ENST00000443443 EZH1Q92800 747 aaPredicted RBP8.36□□□□□ -1.07
VPS50-206ENST00000443443 PIM2Q9P1W9 311 aa8.36□□□□□ -1.07
VPS50-206ENST00000443443 SPG7Q9UQ90 795 aa8.36□□□□□ -1.07
VPS50-206ENST00000443443 DAGLAQ9Y4D2 1042 aa8.36□□□□□ -1.07
VPS50-206ENST00000443443 ARNTP27540 789 aa8.35□□□□□ -1.07
VPS50-206ENST00000443443 TPTE2Q6XPS3 522 aa8.35□□□□□ -1.07
VPS50-206ENST00000443443 OSBPL7Q9BZF2 842 aa8.35□□□□□ -1.07
VPS50-206ENST00000443443 SRCIN1Q9C0H9 1055 aa8.35□□□□□ -1.07
VPS50-206ENST00000443443 SEMA6CQ9H3T2 930 aa8.35□□□□□ -1.07
VPS50-206ENST00000443443 PIDD1Q9HB75 910 aa8.35□□□□□ -1.07
VPS50-206ENST00000443443 PRKAG2Q9UGJ0 569 aa8.35□□□□□ -1.07
VPS50-206ENST00000443443 GIPC1O14908 333 aa8.34□□□□□ -1.07
VPS50-206ENST00000443443 ZNF862O60290 1169 aa8.34□□□□□ -1.07
VPS50-206ENST00000443443 LDHBP07195 334 aaKnown RBP8.34□□□□□ -1.07
VPS50-206ENST00000443443 ADMP35318 185 aa8.34□□□□□ -1.07
VPS50-206ENST00000443443 MAP1SQ66K74 1059 aaPredicted RBP8.34□□□□□ -1.07
VPS50-206ENST00000443443 EMILIN2Q9BXX0 1053 aa8.34□□□□□ -1.07
VPS50-206ENST00000443443 ACSS3Q9H6R3 686 aa8.34□□□□□ -1.07
VPS50-206ENST00000443443 RNGTTO60942 597 aaKnown RBP8.33□□□□□ -1.08
VPS50-206ENST00000443443 FBXO24O75426 580 aa8.33□□□□□ -1.08
VPS50-206ENST00000443443 P4HBP07237 508 aaKnown RBP8.33□□□□□ -1.08
VPS50-206ENST00000443443 NME2P22392 152 aa8.33□□□□□ -1.08
VPS50-206ENST00000443443 ID3Q02535 119 aa8.33□□□□□ -1.08
VPS50-206ENST00000443443 DUSP27Q5VZP5 1158 aa8.33□□□□□ -1.08
VPS50-206ENST00000443443 ZAR1Q86SH2 424 aa8.33□□□□□ -1.08
VPS50-206ENST00000443443 C3orf58Q8NDZ4 430 aa8.33□□□□□ -1.08
VPS50-206ENST00000443443 STK35Q8TDR2 534 aa8.33□□□□□ -1.08
VPS50-206ENST00000443443 ACSBG1Q96GR2 724 aa8.33□□□□□ -1.08
VPS50-206ENST00000443443 METTL22Q9BUU2 404 aaPredicted RBP8.33□□□□□ -1.08
VPS50-206ENST00000443443 CEP44Q9C0F1 390 aa8.33□□□□□ -1.08
VPS50-206ENST00000443443 KRT82Q9NSB4 513 aa8.33□□□□□ -1.08
VPS50-206ENST00000443443 FAM170BA6NMN3 283 aa8.32□□□□□ -1.08
VPS50-206ENST00000443443 TMPRSS2O15393 492 aa8.32□□□□□ -1.08
VPS50-206ENST00000443443 HOXA10P31260 410 aaPredicted RBP8.32□□□□□ -1.08
VPS50-206ENST00000443443 ATXN3LQ9H3M9 355 aa8.32□□□□□ -1.08
VPS50-206ENST00000443443 SSU72Q9NP77 194 aaKnown RBP8.32□□□□□ -1.08
VPS50-206ENST00000443443 CRIM1Q9NZV1 1036 aa8.32□□□□□ -1.08
VPS50-206ENST00000443443 SAMM50Q9Y512 469 aa8.32□□□□□ -1.08
VPS50-206ENST00000443443 SYNGAP1Q96PV0 1343 aa8.31□□□□□ -1.08
VPS50-206ENST00000443443 CYP26A1O43174 497 aa8.31□□□□□ -1.08
VPS50-206ENST00000443443 KIF4BQ2VIQ3 1234 aa8.31□□□□□ -1.08
VPS50-206ENST00000443443 PDZD3Q86UT5 571 aa8.31□□□□□ -1.08
VPS50-206ENST00000443443 KRTAP1-3Q8IUG1 177 aa8.31□□□□□ -1.08
VPS50-206ENST00000443443 NECAB3Q96P71 396 aaPredicted RBP8.31□□□□□ -1.08
VPS50-206ENST00000443443 FANCD2OSQ96PS1 177 aa8.31□□□□□ -1.08
VPS50-206ENST00000443443 GSX1Q9H4S2 264 aaPredicted RBP8.31□□□□□ -1.08
VPS50-206ENST00000443443 ANKRD33BA6NCL7 494 aa8.3□□□□□ -1.08
VPS50-206ENST00000443443 KIAA1324LA8MWY0 1029 aaPredicted RBP8.3□□□□□ -1.08
VPS50-206ENST00000443443 DYNC1LI2O43237 492 aaPredicted RBP8.3□□□□□ -1.08
VPS50-206ENST00000443443 SND1Q7KZF4 910 aaKnown RBP eCLIP8.3□□□□□ -1.08
VPS50-206ENST00000443443 KRTAP4-12Q9BQ66 201 aa8.3□□□□□ -1.08
VPS50-206ENST00000443443 C12orf49Q9H741 205 aa8.3□□□□□ -1.08
VPS50-206ENST00000443443 LRRC4CQ9HCJ2 640 aa8.3□□□□□ -1.08
VPS50-206ENST00000443443 DISC1Q9NRI5 854 aa8.3□□□□□ -1.08
VPS50-206ENST00000443443 WNT11O96014 354 aa8.29□□□□□ -1.08
VPS50-206ENST00000443443 USP17L7P0C7H9 530 aa8.29□□□□□ -1.08
VPS50-206ENST00000443443 HCLS1P14317 486 aaPredicted RBP8.29□□□□□ -1.08
VPS50-206ENST00000443443 FOSL1P15407 271 aa8.29□□□□□ -1.08
VPS50-206ENST00000443443 CYP27A1Q02318 531 aa8.29□□□□□ -1.08
VPS50-206ENST00000443443 TTLL4Q14679 1199 aa8.29□□□□□ -1.08
VPS50-206ENST00000443443 DTX1Q86Y01 620 aa8.29□□□□□ -1.08
VPS50-206ENST00000443443 SMYD4Q8IYR2 804 aaPredicted RBP8.29□□□□□ -1.08
VPS50-206ENST00000443443 GRIN3AQ8TCU5 1115 aa8.29□□□□□ -1.08
VPS50-206ENST00000443443 GPBAR1Q8TDU6 330 aa8.29□□□□□ -1.08
VPS50-206ENST00000443443 FAM8A1Q9UBU6 413 aa8.29□□□□□ -1.08
VPS50-206ENST00000443443 ENC1O14682 589 aa8.28□□□□□ -1.08
VPS50-206ENST00000443443 CPSF6Q16630 551 aaKnown RBP eCLIP8.28□□□□□ -1.08
VPS50-206ENST00000443443 MPRIPQ6WCQ1 1025 aa8.28□□□□□ -1.08
VPS50-206ENST00000443443 ZNF765Q7L2R6 523 aa8.28□□□□□ -1.08
VPS50-206ENST00000443443 PICK1Q9NRD5 415 aa8.28□□□□□ -1.08
VPS50-206ENST00000443443 C1GALT1Q9NS00 363 aa8.28□□□□□ -1.08
VPS50-206ENST00000443443 PPM1HQ9ULR3 514 aa8.28□□□□□ -1.08
VPS50-206ENST00000443443 PAGE1O75459 146 aa8.27□□□□□ -1.09
VPS50-206ENST00000443443 SPINK2P20155 84 aa8.27□□□□□ -1.09
VPS50-206ENST00000443443 BMP6P22004 513 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms