RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 MNS1Q8NEH6 495 aa13.32□□□□□ -0.28
TRAPPC9-202ENST00000438773 C16orf45Q96MC5 204 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-202ENST00000438773 MYL10Q9BUA6 226 aa13.32□□□□□ -0.28
TRAPPC9-202ENST00000438773 UBE4AQ14139 1066 aa13.32□□□□□ -0.28
TRAPPC9-202ENST00000438773 FILIP1LQ4L180 1135 aa13.32□□□□□ -0.28
TRAPPC9-202ENST00000438773 OTUD7BQ6GQQ9 843 aa13.32□□□□□ -0.28
TRAPPC9-202ENST00000438773 PDCL2Q8N4E4 241 aa13.32□□□□□ -0.28
TRAPPC9-202ENST00000438773 PATL2C9JE40 543 aaKnown RBP13.32□□□□□ -0.28
TRAPPC9-202ENST00000438773 SSBP05455 408 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRAPPC9-202ENST00000438773 FOXO4P98177 505 aa13.32□□□□□ -0.28
TRAPPC9-202ENST00000438773 RABL6Q3YEC7 729 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-202ENST00000438773 PAXIP1Q6ZW49 1069 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-202ENST00000438773 TEX11Q8IYF3 940 aa13.32□□□□□ -0.28
TRAPPC9-202ENST00000438773 OSBP2Q969R2 916 aa13.32□□□□□ -0.28
TRAPPC9-202ENST00000438773 NKX1-1Q15270 411 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC9-202ENST00000438773 UBE3CQ15386 1083 aa13.31□□□□□ -0.28
TRAPPC9-202ENST00000438773 CDC37L1Q7L3B6 337 aa13.31□□□□□ -0.28
TRAPPC9-202ENST00000438773 CLEC4GQ6UXB4 293 aa13.31□□□□□ -0.28
TRAPPC9-202ENST00000438773 EYA3Q99504 573 aa13.31□□□□□ -0.28
TRAPPC9-202ENST00000438773 TRMT1Q9NXH9 659 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-202ENST00000438773 PXDNQ92626 1479 aa13.31□□□□□ -0.28
TRAPPC9-202ENST00000438773 DLG5Q8TDM6 1919 aa13.31□□□□□ -0.28
TRAPPC9-202ENST00000438773 KRT18P05783 430 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-202ENST00000438773 SLFNL1Q499Z3 407 aa13.31□□□□□ -0.28
TRAPPC9-202ENST00000438773 AKNAD1Q5T1N1 836 aa13.31□□□□□ -0.28
TRAPPC9-202ENST00000438773 MARCH10Q8NA82 808 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC9-202ENST00000438773 GTF3C6Q969F1 213 aa13.31□□□□□ -0.28
TRAPPC9-202ENST00000438773 SPTLC2O15270 562 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 NECTIN1Q15223 517 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 IFNL3Q8IZI9 196 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 FLAD1Q8NFF5 587 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 MRPS27Q92552 414 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 SMTNL1A8MU46 457 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 DYNC1I1O14576 645 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 CALM1P0DP23 149 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 CALM2P0DP24 149 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 CALM3P0DP25 149 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 GNAQP50148 359 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 ISM2Q6H9L7 571 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 SDR42E1Q8WUS8 393 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 ZHX3Q9H4I2 956 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 SAP30BPQ9UHR5 308 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 RTL9Q8NET4 1388 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 KLHL10Q6JEL2 608 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 CCDC112Q8NEF3 446 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 SPATA31A1Q5TZJ5 1347 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 RPS6KA4O75676 772 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 SYKP43405 635 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 STIM1Q13586 685 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 DHX8Q14562 1220 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 CCDC178Q5BJE1 867 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 PRDM4Q9UKN5 801 aa13.3□□□□□ -0.28
TRAPPC9-202ENST00000438773 USP17L12C9JPN9 530 aa13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 USP17L21D6R901 530 aa13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 CUL4AQ13619 759 aa13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 GPR162Q16538 588 aa13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 GOLGA6L1Q8N7Z2 621 aa13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 DPP8Q6V1X1 898 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 CCDC12Q8WUD4 166 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 PHKBQ93100 1093 aa13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 PUS7LQ9H0K6 701 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 OVOS2A0A0G2JMS6 1433 aa13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 ADCY5O95622 1261 aa13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 PPP4R3BQ5MIZ7 849 aa13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 MSL1Q68DK7 614 aa13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 BRAPQ7Z569 592 aa13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 OGFOD1Q8N543 542 aa13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 CGNQ9P2M7 1197 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-202ENST00000438773 M0R2C6 588 aa13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 CFAP100Q494V2 611 aa13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 MAGEC2Q9UBF1 373 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 PXDNLA1KZ92 1463 aa13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 ZNF804BA4D1E1 1349 aa13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 ADD2P35612 726 aa13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 ZNF76P36508 570 aa13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 GJD4Q96KN9 370 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 CABP5Q9NP86 173 aa13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 V9GYY5 206 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 CDHR2Q9BYE9 1310 aa13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 MCAMP43121 646 aa13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 STX1AQ16623 288 aa13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 HEATR3Q7Z4Q2 680 aa13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 MTERF4Q7Z6M4 381 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-202ENST00000438773 RASGRF1Q13972 1273 aa13.27□□□□□ -0.28
TRAPPC9-202ENST00000438773 ZNF274Q96GC6 653 aaPredicted RBP13.27□□□□□ -0.28
TRAPPC9-202ENST00000438773 TMX1Q9H3N1 280 aa13.27□□□□□ -0.28
TRAPPC9-202ENST00000438773 KDM6AO15550 1401 aaPredicted RBP13.27□□□□□ -0.28
TRAPPC9-202ENST00000438773 EIF5P55010 431 aaKnown RBP13.27□□□□□ -0.28
TRAPPC9-202ENST00000438773 SMIM5Q71RC9 77 aa13.27□□□□□ -0.28
TRAPPC9-202ENST00000438773 MTMR6Q9Y217 621 aa13.27□□□□□ -0.28
TRAPPC9-202ENST00000438773 COL15A1P39059 1388 aa13.27□□□□□ -0.28
TRAPPC9-202ENST00000438773 TRIM75PA6NK02 468 aa13.27□□□□□ -0.29
TRAPPC9-202ENST00000438773 SERPINB2P05120 415 aa13.27□□□□□ -0.29
TRAPPC9-202ENST00000438773 ATG9AQ7Z3C6 839 aa13.27□□□□□ -0.29
TRAPPC9-202ENST00000438773 ADD1P35611 737 aaKnown RBP13.27□□□□□ -0.29
TRAPPC9-202ENST00000438773 PPARAQ07869 468 aa13.27□□□□□ -0.29
TRAPPC9-202ENST00000438773 NOLC1Q14978 699 aaKnown RBP eCLIP13.27□□□□□ -0.29
TRAPPC9-202ENST00000438773 MFSD14BQ5SR56 506 aa13.27□□□□□ -0.29
TRAPPC9-202ENST00000438773 DHX37Q8IY37 1157 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms