RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 ANO1Q5XXA6 986 aa10.2□□□□□ -0.78
CDH13-202ENST00000428848 TTLL7Q6ZT98 887 aa10.2□□□□□ -0.78
CDH13-202ENST00000428848 TMC6Q7Z403 805 aa10.2□□□□□ -0.78
CDH13-202ENST00000428848 EFCC1Q9HA90 598 aa10.2□□□□□ -0.78
CDH13-202ENST00000428848 ORC3Q9UBD5 711 aaPredicted RBP10.2□□□□□ -0.78
CDH13-202ENST00000428848 HPSEQ9Y251 543 aa10.2□□□□□ -0.78
CDH13-202ENST00000428848 PRC1O43663 620 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 WDHD1O75717 1129 aaPredicted RBP10.19□□□□□ -0.78
CDH13-202ENST00000428848 ZFYP08048 801 aaPredicted RBP10.19□□□□□ -0.78
CDH13-202ENST00000428848 PFKFB1P16118 471 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 MMP14P50281 582 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 SLC39A14Q15043 492 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 SF3A1Q15459 793 aaKnown RBP10.19□□□□□ -0.78
CDH13-202ENST00000428848 IMMTQ16891 758 aaKnown RBP10.19□□□□□ -0.78
CDH13-202ENST00000428848 ZNF594Q96JF6 807 aaPredicted RBP10.19□□□□□ -0.78
CDH13-202ENST00000428848 PUS3Q9BZE2 481 aaKnown RBP10.19□□□□□ -0.78
CDH13-202ENST00000428848 TMX1Q9H3N1 280 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 STRN4Q9NRL3 753 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDH13-202ENST00000428848 FBXO3Q9UK99 471 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 V9GYY5 206 aaPredicted RBP10.19□□□□□ -0.78
CDH13-202ENST00000428848 MROH7-TTC4A0A0A0MT08 1334 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 ABCC12Q96J65 1359 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 KLF18A0A0U1RQI7 1052 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 SMC2O95347 1197 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 SFPQP23246 707 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDH13-202ENST00000428848 FANCCQ00597 558 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 BMS1Q14692 1282 aaKnown RBP10.19□□□□□ -0.78
CDH13-202ENST00000428848 LRRFIP1Q32MZ4 808 aaKnown RBP10.19□□□□□ -0.78
CDH13-202ENST00000428848 ZNF772Q68DY9 489 aaPredicted RBP10.19□□□□□ -0.78
CDH13-202ENST00000428848 FBXW7Q969H0 707 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 NOL10Q9BSC4 688 aaKnown RBP10.19□□□□□ -0.78
CDH13-202ENST00000428848 TRIM34Q9BYJ4 488 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 YY1AP1Q9H869 796 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 GJB4Q9NTQ9 266 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 ZNF446Q9NWS9 450 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 FEZ2Q9UHY8 353 aaPredicted RBP10.19□□□□□ -0.78
CDH13-202ENST00000428848 SHANK3Q9BYB0 1731 aa10.19□□□□□ -0.78
CDH13-202ENST00000428848 KCPQ6ZWJ8 1503 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 ERICH4A6NGS2 130 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 STARD3NLO95772 234 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 NCOA7Q8NI08 942 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 APPBP2Q92624 585 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.18□□□□□ -0.78
CDH13-202ENST00000428848 GOLGA8BA8MQT2 603 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 PPP6R2O75170 966 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 HAND2P61296 217 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 TPM4P67936 248 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 PTPAQ15257 358 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 MUM1L1Q5H9M0 696 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 TRIM65Q6PJ69 517 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 SYT10Q6XYQ8 523 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 KIF6Q6ZMV9 814 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 SYNE3Q6ZMZ3 975 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 LRRN4CLQ8ND94 238 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 PUS7LQ9H0K6 701 aaKnown RBP10.18□□□□□ -0.78
CDH13-202ENST00000428848 PHLPP2Q6ZVD8 1323 aa10.18□□□□□ -0.78
CDH13-202ENST00000428848 MYO5AQ9Y4I1 1855 aaKnown RBP10.17□□□□□ -0.78
CDH13-202ENST00000428848 BIN1O00499 593 aa10.17□□□□□ -0.78
CDH13-202ENST00000428848 ADORA1P30542 326 aa10.17□□□□□ -0.78
CDH13-202ENST00000428848 ETF1P62495 437 aaKnown RBP10.17□□□□□ -0.78
CDH13-202ENST00000428848 ERCC6LQ2NKX8 1250 aa10.17□□□□□ -0.78
CDH13-202ENST00000428848 CCDC158Q5M9N0 1113 aa10.17□□□□□ -0.78
CDH13-202ENST00000428848 XAGE2Q96GT9 111 aa10.17□□□□□ -0.78
CDH13-202ENST00000428848 ISCA1Q9BUE6 129 aa10.17□□□□□ -0.78
CDH13-202ENST00000428848 NBPF3Q9H094 633 aa10.17□□□□□ -0.78
CDH13-202ENST00000428848 CEP126Q9P2H0 1117 aa10.17□□□□□ -0.78
CDH13-202ENST00000428848 TNS2Q63HR2 1409 aa10.17□□□□□ -0.78
CDH13-202ENST00000428848 CCP110O43303 1012 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 MYO1BO43795 1136 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 ATP1A3P13637 1013 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 AFF2P51816 1311 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 HNRNPH2P55795 449 aaKnown RBP10.16□□□□□ -0.78
CDH13-202ENST00000428848 FKBP4Q02790 459 aaKnown RBP eCLIP10.16□□□□□ -0.78
CDH13-202ENST00000428848 SCARF1Q14162 830 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 ZRSR1Q15695 479 aaKnown RBP10.16□□□□□ -0.78
CDH13-202ENST00000428848 SHC4Q6S5L8 630 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 DPF2Q92785 391 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 C8orf37Q96NL8 207 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 MAP3K14Q99558 947 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 CDCA7Q9BWT1 371 aaPredicted RBP10.16□□□□□ -0.78
CDH13-202ENST00000428848 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.16□□□□□ -0.78
CDH13-202ENST00000428848 ATRNO75882 1429 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 ZMYM6O95789 1325 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 CPLX1O14810 134 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 FANCGO15287 622 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 NRDCO43847 1150 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 ADAMTS2O95450 1211 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 LMOD1P29536 600 aaPredicted RBP10.16□□□□□ -0.78
CDH13-202ENST00000428848 RAD51AP2Q09MP3 1159 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 HSP90AB3PQ58FF7 597 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 TTC39AQ5SRH9 613 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 REXO1L1PQ8IX06 675 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 ELOA2Q8IYF1 753 aaPredicted RBP10.16□□□□□ -0.78
CDH13-202ENST00000428848 NKX2-3Q8TAU0 364 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 AKAP2Q9Y2D5 859 aa10.16□□□□□ -0.78
CDH13-202ENST00000428848 RXRBP28702 533 aa10.15□□□□□ -0.78
CDH13-202ENST00000428848 ZAP70P43403 619 aa10.15□□□□□ -0.78
CDH13-202ENST00000428848 SYKP43405 635 aa10.15□□□□□ -0.78
CDH13-202ENST00000428848 CLCN6P51797 869 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms