RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 NEDD4P46934 1319 aa13.35□□□□□ -0.27
TRAFD1-202ENST00000412615 KRT23Q9C075 422 aa13.35□□□□□ -0.27
TRAFD1-202ENST00000412615 EPB41L4AQ9HCS5 686 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-202ENST00000412615 UQCRHLA0A096LP55 91 aa13.35□□□□□ -0.27
TRAFD1-202ENST00000412615 UQCRHP07919 91 aa13.35□□□□□ -0.27
TRAFD1-202ENST00000412615 BCAMP50895 628 aa13.35□□□□□ -0.27
TRAFD1-202ENST00000412615 AKNAD1Q5T1N1 836 aa13.35□□□□□ -0.27
TRAFD1-202ENST00000412615 ANO1Q5XXA6 986 aa13.35□□□□□ -0.27
TRAFD1-202ENST00000412615 NKX2-3Q8TAU0 364 aa13.35□□□□□ -0.27
TRAFD1-202ENST00000412615 CDC5LQ99459 802 aaKnown RBP13.35□□□□□ -0.27
TRAFD1-202ENST00000412615 LY9Q9HBG7 655 aa13.35□□□□□ -0.27
TRAFD1-202ENST00000412615 GJB4Q9NTQ9 266 aa13.35□□□□□ -0.27
TRAFD1-202ENST00000412615 PNPLA7Q6ZV29 1317 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 A0A1B0GVL5 298 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 GSG1L2A8MUP6 293 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 BECN2A8MW95 431 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 RRP9O43818 475 aaKnown RBP13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 IARSP41252 1262 aaKnown RBP13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 CHRNDQ07001 517 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 SARM1Q6SZW1 724 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 MFSD6Q6ZSS7 791 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 C11orf57Q6ZUT1 292 aaPredicted RBP13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 MICU3Q86XE3 530 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 NAT10Q9H0A0 1025 aaKnown RBP13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 ZSWIM5Q9P217 1185 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 SLC12A7Q9Y666 1083 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 SPATA31A5Q5VU36 1347 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 SPATA31A7Q8IWB4 1347 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 CCDC69A6NI79 296 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 GOLGA8AA7E2F4 631 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 KIF28PB7ZC32 967 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 RXRAP19793 462 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 CDC27P30260 824 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 NDUFA8P51970 172 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 CLEC4GQ6UXB4 293 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 BARGINQ6ZT62 677 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 CCDC186Q7Z3E2 898 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 CEP57L1Q8IYX8 460 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 LRP2BPQ9P2M1 347 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 SLC4A4Q9Y6R1 1079 aa13.34□□□□□ -0.27
TRAFD1-202ENST00000412615 PTGS1P23219 599 aa13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 CDC25BP30305 580 aa13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 TDO2P48775 406 aa13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 CTDSPL2Q05D32 466 aa13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 TRIM29Q14134 588 aa13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 KRT40Q6A162 431 aa13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 PRIMPOLQ96LW4 560 aa13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 SENP2Q9HC62 589 aa13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 MYO5AQ9Y4I1 1855 aaKnown RBP13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 GNL2Q13823 731 aaKnown RBP13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 HSP90AA2PQ14568 343 aaPredicted RBP13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 ZRSR1Q15695 479 aaKnown RBP13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 NTRK3Q16288 839 aa13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 C17orf53Q8N3J3 647 aaPredicted RBP13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 PYCARDQ9ULZ3 195 aa13.33□□□□□ -0.28
TRAFD1-202ENST00000412615 C4AP0C0L4 1744 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 C4BP0C0L5 1744 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 RREB1Q92766 1687 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 CMA1P23946 247 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 SART3Q15020 963 aaKnown RBP13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 SLC39A14Q15043 492 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 VPS37DQ86XT2 251 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 LCORLQ8N3X6 602 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 STAG1Q8WVM7 1258 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 PHKBQ93100 1093 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 AIFM3Q96NN9 605 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 MTA3Q9BTC8 594 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 INCENPQ9NQS7 918 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 DYNC1I1O14576 645 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 PRKAB2O43741 272 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 CCDC144CPQ8IYA2 1237 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 JMYQ8N9B5 988 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 WASF1Q92558 559 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 MRFAP1L1Q96HT8 127 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 RNF41Q9H4P4 317 aaPredicted RBP13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 FAM217BQ9NTX9 383 aaPredicted RBP13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 GNL3LQ9NVN8 582 aaKnown RBP13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 KIAA1468Q9P260 1216 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 CLIP2Q9UDT6 1046 aa13.32□□□□□ -0.28
TRAFD1-202ENST00000412615 STK36Q9NRP7 1315 aa13.31□□□□□ -0.28
TRAFD1-202ENST00000412615 DOCK2Q92608 1830 aa13.31□□□□□ -0.28
TRAFD1-202ENST00000412615 SSRP1Q08945 709 aaKnown RBP13.31□□□□□ -0.28
TRAFD1-202ENST00000412615 TMTC2Q8N394 836 aa13.31□□□□□ -0.28
TRAFD1-202ENST00000412615 ERICH2A1L162 156 aa13.31□□□□□ -0.28
TRAFD1-202ENST00000412615 PPP6R2O75170 966 aa13.31□□□□□ -0.28
TRAFD1-202ENST00000412615 ZNF202O95125 648 aa13.31□□□□□ -0.28
TRAFD1-202ENST00000412615 AXDND1Q5T1B0 1012 aaPredicted RBP13.31□□□□□ -0.28
TRAFD1-202ENST00000412615 ANKRD18AQ8IVF6 992 aa13.31□□□□□ -0.28
TRAFD1-202ENST00000412615 NRAPQ86VF7 1730 aa13.31□□□□□ -0.28
TRAFD1-202ENST00000412615 CICQ96RK0 1608 aaPredicted RBP13.31□□□□□ -0.28
TRAFD1-202ENST00000412615 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 CYP7A1P22680 504 aa13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 U2AF2P26368 475 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 SF3B3Q15393 1217 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 DHX40Q8IX18 779 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 MYL10Q9BUA6 226 aa13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 TOMM22Q9NS69 142 aa13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 RANBP6O60518 1105 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-202ENST00000412615 FMNL1O95466 1100 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms