RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 PLEKHA4Q9H4M7 779 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 POLKQ9UBT6 870 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 FHOD1Q9Y613 1164 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 EMILIN1Q9Y6C2 1016 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 KAT6AQ92794 2004 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 NUP214P35658 2090 aaPredicted RBP3.78□□□□□ -1.8
RGPD3-202ENST00000409886 ADCY5O95622 1261 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 MAP4K4O95819 1239 aaPredicted RBP3.78□□□□□ -1.8
RGPD3-202ENST00000409886 NCLP19338 710 aaKnown RBP3.78□□□□□ -1.8
RGPD3-202ENST00000409886 E2F4Q16254 413 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 ITPRIPQ8IWB1 547 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 KAT2BQ92831 832 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 TFIP11Q9UBB9 837 aaKnown RBP3.78□□□□□ -1.8
RGPD3-202ENST00000409886 RP1P56715 2156 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 SART3Q15020 963 aaKnown RBP3.78□□□□□ -1.8
RGPD3-202ENST00000409886 MAP3K11Q16584 847 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 CKAP2LQ8IYA6 745 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 NECAB1Q8N987 351 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 SUPT20HQ8NEM7 779 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 ATXN2LQ8WWM7 1075 aaKnown RBP3.78□□□□□ -1.8
RGPD3-202ENST00000409886 CLIC6Q96NY7 704 aa3.78□□□□□ -1.8
RGPD3-202ENST00000409886 DOCK2Q92608 1830 aa3.78□□□□□ -1.81
RGPD3-202ENST00000409886 ATAD5Q96QE3 1844 aa3.78□□□□□ -1.81
RGPD3-202ENST00000409886 MGAMO43451 1857 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 DCHS2Q6V1P9 2916 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 HUNKP57058 714 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 DNM1Q05193 864 aaKnown RBP3.77□□□□□ -1.81
RGPD3-202ENST00000409886 OTOP1Q7RTM1 612 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 PGBD1Q96JS3 809 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 GDF15Q99988 308 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 H3BQF6 201 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 U2AF1L5P0DN76 240 aaPredicted RBP3.77□□□□□ -1.81
RGPD3-202ENST00000409886 U2AF1Q01081 240 aaKnown RBP eCLIP3.77□□□□□ -1.81
RGPD3-202ENST00000409886 LOC102724159A0A0B4J2E5 919 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 ZPR1O75312 459 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 SEC31AO94979 1220 aaKnown RBP3.77□□□□□ -1.81
RGPD3-202ENST00000409886 RPS12P25398 132 aaKnown RBP3.77□□□□□ -1.81
RGPD3-202ENST00000409886 NEK4P51957 841 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 RAD51AP2Q09MP3 1159 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 PWP2Q15269 919 aaKnown RBP3.77□□□□□ -1.81
RGPD3-202ENST00000409886 CCDC27Q2M243 656 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 FOXP4Q8IVH2 680 aaPredicted RBP3.77□□□□□ -1.81
RGPD3-202ENST00000409886 SEC62Q99442 399 aaKnown RBP3.77□□□□□ -1.81
RGPD3-202ENST00000409886 SMC4Q9NTJ3 1288 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 MAPK8IP3Q9UPT6 1336 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 SMCHD1A6NHR9 2005 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 RNF225M0QZC1 329 aaPredicted RBP3.77□□□□□ -1.81
RGPD3-202ENST00000409886 E4F1Q66K89 784 aaPredicted RBP3.77□□□□□ -1.81
RGPD3-202ENST00000409886 PRPF40BQ6NWY9 871 aaKnown RBP3.77□□□□□ -1.81
RGPD3-202ENST00000409886 LRSAM1Q6UWE0 723 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.77□□□□□ -1.81
RGPD3-202ENST00000409886 CCDC186Q7Z3E2 898 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 RIN2Q8WYP3 895 aaPredicted RBP3.77□□□□□ -1.81
RGPD3-202ENST00000409886 SLX1AQ9BQ83 275 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 TFR2Q9UP52 801 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 FLT4P35916 1363 aa3.77□□□□□ -1.81
RGPD3-202ENST00000409886 TRPA1O75762 1119 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 SRGNP10124 158 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 SYT1P21579 422 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 BMP6P22004 513 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 NOP2P46087 812 aaKnown RBP3.76□□□□□ -1.81
RGPD3-202ENST00000409886 NFIXQ14938 502 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 CWC27Q6UX04 472 aaKnown RBP3.76□□□□□ -1.81
RGPD3-202ENST00000409886 ERMP1Q7Z2K6 904 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 RTF1Q92541 710 aaKnown RBP3.76□□□□□ -1.81
RGPD3-202ENST00000409886 FAM212AQ96EL1 285 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 IL1RAPL2Q9NP60 686 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 DDX60LQ5H9U9 1706 aaKnown RBP3.76□□□□□ -1.81
RGPD3-202ENST00000409886 MAP3K13O43283 966 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 PTH1RQ03431 593 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 CUL4AQ13619 759 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 ELF2Q15723 593 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 CAMK4Q16566 473 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 RUFY3Q7L099 469 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 KIRREL3Q8IZU9 778 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 ANKLE1Q8NAG6 615 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 RTFDC1Q9BY42 306 aaPredicted RBP3.76□□□□□ -1.81
RGPD3-202ENST00000409886 TRMT1Q9NXH9 659 aaKnown RBP3.76□□□□□ -1.81
RGPD3-202ENST00000409886 MYH6P13533 1939 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 PLCE1Q9P212 2302 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 POTEB2H3BUK9 544 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 CYP27B1O15528 508 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 ALDH1B1P30837 517 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 JDP2Q8WYK2 163 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 GUCD1Q96NT3 240 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 DNAJC25Q9H1X3 360 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 TRIM6-TRIM34B2RNG4 842 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 ATP1A3P13637 1013 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 CRKLP46109 303 aaKnown RBP3.76□□□□□ -1.81
RGPD3-202ENST00000409886 ZNF157P51786 506 aaPredicted RBP3.76□□□□□ -1.81
RGPD3-202ENST00000409886 DPF2Q92785 391 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 TRIM34Q9BYJ4 488 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 INTS13Q9NVM9 706 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 KNSTRNQ9Y448 316 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 LRRC37A2A6NM11 1700 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 MANSC4A6NHS7 340 aaPredicted RBP3.76□□□□□ -1.81
RGPD3-202ENST00000409886 C21orf2O43822 256 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 GPR37L1O60883 481 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 NR1I2O75469 434 aa3.76□□□□□ -1.81
RGPD3-202ENST00000409886 EN2P19622 333 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms