RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 NECAB1Q8N987 351 aa13.95□□□□□ -0.18
SKA3-203ENST00000400018 TDO2P48775 406 aa13.95□□□□□ -0.18
SKA3-203ENST00000400018 AK2P54819 239 aa13.95□□□□□ -0.18
SKA3-203ENST00000400018 TCP10Q12799 353 aa13.95□□□□□ -0.18
SKA3-203ENST00000400018 SLC44A5Q8NCS7 719 aa13.95□□□□□ -0.18
SKA3-203ENST00000400018 LRRC37AA6NMS7 1700 aa13.95□□□□□ -0.18
SKA3-203ENST00000400018 FAM196BA6NMK8 535 aa13.94□□□□□ -0.18
SKA3-203ENST00000400018 PSMD14O00487 310 aa13.94□□□□□ -0.18
SKA3-203ENST00000400018 YBX3P16989 372 aaKnown RBP eCLIP13.94□□□□□ -0.186e-7■■■□□ 18.1
SKA3-203ENST00000400018 BTDP43251 543 aa13.94□□□□□ -0.18
SKA3-203ENST00000400018 ZFPM1Q8IX07 1006 aa13.94□□□□□ -0.18
SKA3-203ENST00000400018 DYNLL2Q96FJ2 89 aa13.94□□□□□ -0.18
SKA3-203ENST00000400018 SNED1Q8TER0 1413 aa13.94□□□□□ -0.18
SKA3-203ENST00000400018 E7EWF7 191 aa13.94□□□□□ -0.18
SKA3-203ENST00000400018 RXRAP19793 462 aa13.94□□□□□ -0.18
SKA3-203ENST00000400018 MCCP23508 829 aa13.94□□□□□ -0.18
SKA3-203ENST00000400018 COA1Q9GZY4 146 aa13.94□□□□□ -0.18
SKA3-203ENST00000400018 DAXXQ9UER7 740 aaPredicted RBP13.94□□□□□ -0.18
SKA3-203ENST00000400018 TGFB2P61812 414 aa13.93□□□□□ -0.18
SKA3-203ENST00000400018 KIAA2012Q0VF49 1180 aa13.93□□□□□ -0.18
SKA3-203ENST00000400018 NAPBQ9H115 298 aa13.93□□□□□ -0.18
SKA3-203ENST00000400018 NEDD4P46934 1319 aa13.93□□□□□ -0.18
SKA3-203ENST00000400018 B4E1Z4 1266 aa13.93□□□□□ -0.18
SKA3-203ENST00000400018 USP17L12C9JPN9 530 aa13.93□□□□□ -0.18
SKA3-203ENST00000400018 USP17L21D6R901 530 aa13.93□□□□□ -0.18
SKA3-203ENST00000400018 ZFYP08048 801 aaPredicted RBP13.93□□□□□ -0.18
SKA3-203ENST00000400018 NFIAQ12857 509 aa13.93□□□□□ -0.18
SKA3-203ENST00000400018 WDR66Q8TBY9 1149 aa13.93□□□□□ -0.18
SKA3-203ENST00000400018 GJA3Q9Y6H8 435 aa13.93□□□□□ -0.18
SKA3-203ENST00000400018 KIAA1551Q9HCM1 1747 aa13.93□□□□□ -0.18
SKA3-203ENST00000400018 CLRN2A0PK11 232 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 DLK2Q6UY11 383 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 RUFY3Q7L099 469 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 CDAN1Q8IWY9 1227 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 DAGLAQ9Y4D2 1042 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 CENPFP49454 3210 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 PKP1Q13835 747 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 SHROOM1Q2M3G4 852 aaPredicted RBP13.92□□□□□ -0.18
SKA3-203ENST00000400018 DACT2Q5SW24 774 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 ZSCAN25Q6NSZ9 544 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 HSCBQ8IWL3 235 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 EYA3Q99504 573 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 RTFDC1Q9BY42 306 aaPredicted RBP13.92□□□□□ -0.18
SKA3-203ENST00000400018 ZMYND15Q9H091 742 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 DDX4Q9NQI0 724 aaKnown RBP13.92□□□□□ -0.18
SKA3-203ENST00000400018 MYH2Q9UKX2 1941 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 ASTN2O75129 1339 aaPredicted RBP13.92□□□□□ -0.18
SKA3-203ENST00000400018 NMT2O60551 498 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 PLCD1P51178 756 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 FOSBP53539 338 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 FOXD4L6Q3SYB3 417 aaPredicted RBP13.92□□□□□ -0.18
SKA3-203ENST00000400018 FOXD4L3Q6VB84 417 aaPredicted RBP13.92□□□□□ -0.18
SKA3-203ENST00000400018 TAOK3Q9H2K8 898 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 MTMR7Q9Y216 660 aa13.92□□□□□ -0.18
SKA3-203ENST00000400018 DOCK2Q92608 1830 aa13.91□□□□□ -0.18
SKA3-203ENST00000400018 ZNF213O14771 459 aa13.91□□□□□ -0.18
SKA3-203ENST00000400018 ZKSCAN1P17029 563 aaPredicted RBP13.91□□□□□ -0.18
SKA3-203ENST00000400018 CXCL9Q07325 125 aa13.91□□□□□ -0.18
SKA3-203ENST00000400018 CYB5R4Q7L1T6 521 aa13.91□□□□□ -0.18
SKA3-203ENST00000400018 CCDC144CPQ8IYA2 1237 aa13.91□□□□□ -0.18
SKA3-203ENST00000400018 MYL10Q9BUA6 226 aa13.91□□□□□ -0.18
SKA3-203ENST00000400018 MCM9Q9NXL9 1143 aa13.91□□□□□ -0.18
SKA3-203ENST00000400018 PATL2C9JE40 543 aaKnown RBP13.91□□□□□ -0.18
SKA3-203ENST00000400018 IARSP41252 1262 aaKnown RBP13.91□□□□□ -0.18
SKA3-203ENST00000400018 USP5P45974 858 aa13.91□□□□□ -0.18
SKA3-203ENST00000400018 FAM47AQ5JRC9 791 aa13.91□□□□□ -0.18
SKA3-203ENST00000400018 C15orf52Q6ZUT6 534 aaKnown RBP13.91□□□□□ -0.18
SKA3-203ENST00000400018 TMC4Q7Z404 712 aa13.91□□□□□ -0.18
SKA3-203ENST00000400018 DSCC1Q9BVC3 393 aa13.91□□□□□ -0.18
SKA3-203ENST00000400018 TDRD3Q9H7E2 651 aaKnown RBP13.91□□□□□ -0.18
SKA3-203ENST00000400018 PDRG1Q9NUG6 133 aa13.91□□□□□ -0.18
SKA3-203ENST00000400018 HSP90AA1P07900 732 aaKnown RBP13.9□□□□□ -0.18
SKA3-203ENST00000400018 RABEP1Q15276 862 aa13.9□□□□□ -0.18
SKA3-203ENST00000400018 Q6ZUG5 572 aa13.9□□□□□ -0.18
SKA3-203ENST00000400018 NEK1Q96PY6 1258 aa13.9□□□□□ -0.18
SKA3-203ENST00000400018 DCP1AQ9NPI6 582 aaPredicted RBP13.9□□□□□ -0.18
SKA3-203ENST00000400018 TPCN1Q9ULQ1 816 aa13.9□□□□□ -0.18
SKA3-203ENST00000400018 CD2APQ9Y5K6 639 aa13.9□□□□□ -0.18
SKA3-203ENST00000400018 U3KPZ7 1027 aaPredicted RBP13.9□□□□□ -0.18
SKA3-203ENST00000400018 USP17L3A6NCW0 530 aa13.9□□□□□ -0.18
SKA3-203ENST00000400018 USP17L4A6NCW7 530 aa13.9□□□□□ -0.18
SKA3-203ENST00000400018 APOBRQ0VD83 1088 aa13.9□□□□□ -0.18
SKA3-203ENST00000400018 CTR9Q6PD62 1173 aa13.9□□□□□ -0.18
SKA3-203ENST00000400018 USP17L1Q7RTZ2 530 aa13.9□□□□□ -0.18
SKA3-203ENST00000400018 BRF1Q92994 677 aa13.9□□□□□ -0.18
SKA3-203ENST00000400018 TMX3Q96JJ7 454 aa13.9□□□□□ -0.18
SKA3-203ENST00000400018 SEMA3EO15041 775 aa13.89□□□□□ -0.19
SKA3-203ENST00000400018 CCT2P78371 535 aaKnown RBP13.89□□□□□ -0.19
SKA3-203ENST00000400018 BLOC1S2Q6QNY1 142 aa13.89□□□□□ -0.19
SKA3-203ENST00000400018 RASGRP2Q7LDG7 609 aa13.89□□□□□ -0.19
SKA3-203ENST00000400018 CLEC10AQ8IUN9 316 aa13.89□□□□□ -0.19
SKA3-203ENST00000400018 PRMT6Q96LA8 375 aaPredicted RBP13.89□□□□□ -0.19
SKA3-203ENST00000400018 NCOA5Q9HCD5 579 aaKnown RBP13.89□□□□□ -0.19
SKA3-203ENST00000400018 FZD1Q9UP38 647 aa13.89□□□□□ -0.19
SKA3-203ENST00000400018 MROH7-TTC4A0A0A0MT08 1334 aa13.89□□□□□ -0.19
SKA3-203ENST00000400018 ANTXR2P58335 489 aa13.89□□□□□ -0.19
SKA3-203ENST00000400018 ST3GAL1Q11201 340 aa13.89□□□□□ -0.19
SKA3-203ENST00000400018 TOB2Q14106 344 aaPredicted RBP13.89□□□□□ -0.19
SKA3-203ENST00000400018 PODNQ7Z5L7 613 aa13.89□□□□□ -0.19
SKA3-203ENST00000400018 TEX11Q8IYF3 940 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms