RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 PDE1AP54750 535 aa12.7□□□□□ -0.38
CYCSP55-201ENST00000399027 MAP3K12Q12852 859 aa12.7□□□□□ -0.38
CYCSP55-201ENST00000399027 TSHZ3Q63HK5 1081 aa12.7□□□□□ -0.38
CYCSP55-201ENST00000399027 SULF1Q8IWU6 871 aa12.7□□□□□ -0.38
CYCSP55-201ENST00000399027 GLIS2Q9BZE0 524 aaPredicted RBP12.7□□□□□ -0.38
CYCSP55-201ENST00000399027 TDRD3Q9H7E2 651 aaKnown RBP12.7□□□□□ -0.38
CYCSP55-201ENST00000399027 ZNF70Q9UC06 446 aaPredicted RBP12.7□□□□□ -0.38
CYCSP55-201ENST00000399027 DDX60LQ5H9U9 1706 aaKnown RBP12.7□□□□□ -0.38
CYCSP55-201ENST00000399027 MYH1P12882 1939 aa12.7□□□□□ -0.38
CYCSP55-201ENST00000399027 RFX7Q2KHR2 1363 aa12.69□□□□□ -0.38
CYCSP55-201ENST00000399027 IDH1O75874 414 aaKnown RBP12.69□□□□□ -0.38
CYCSP55-201ENST00000399027 FKBP1CQ5VVH2 108 aa12.69□□□□□ -0.38
CYCSP55-201ENST00000399027 NAA16Q6N069 864 aaPredicted RBP12.69□□□□□ -0.38
CYCSP55-201ENST00000399027 CENPQQ7L2Z9 268 aaPredicted RBP12.69□□□□□ -0.38
CYCSP55-201ENST00000399027 KRT26Q7Z3Y9 468 aa12.69□□□□□ -0.38
CYCSP55-201ENST00000399027 PLEKHM2Q8IWE5 1019 aa12.69□□□□□ -0.38
CYCSP55-201ENST00000399027 EDC3Q96F86 508 aaKnown RBP12.69□□□□□ -0.38
CYCSP55-201ENST00000399027 PPP2R3BQ9Y5P8 575 aa12.69□□□□□ -0.38
CYCSP55-201ENST00000399027 NAV1Q8NEY1 1877 aa12.69□□□□□ -0.38
CYCSP55-201ENST00000399027 CLRN2A0PK11 232 aa12.68□□□□□ -0.38
CYCSP55-201ENST00000399027 ADM5C9JUS6 153 aa12.68□□□□□ -0.38
CYCSP55-201ENST00000399027 MAP4K4O95819 1239 aaPredicted RBP12.68□□□□□ -0.38
CYCSP55-201ENST00000399027 PDE4AP27815 886 aa12.68□□□□□ -0.38
CYCSP55-201ENST00000399027 BTDP43251 543 aa12.68□□□□□ -0.38
CYCSP55-201ENST00000399027 CDC42EP5Q6NZY7 148 aa12.68□□□□□ -0.38
CYCSP55-201ENST00000399027 ADGRA1Q86SQ6 560 aa12.68□□□□□ -0.38
CYCSP55-201ENST00000399027 USP48Q86UV5 1035 aa12.68□□□□□ -0.38
CYCSP55-201ENST00000399027 OTOFQ9HC10 1997 aa12.68□□□□□ -0.38
CYCSP55-201ENST00000399027 LAMB1P07942 1786 aa12.68□□□□□ -0.38
CYCSP55-201ENST00000399027 CNTNAP1P78357 1384 aa12.68□□□□□ -0.38
CYCSP55-201ENST00000399027 RPAP1Q9BWH6 1393 aaPredicted RBP12.68□□□□□ -0.38
CYCSP55-201ENST00000399027 SIPA1L1O43166 1804 aa12.67□□□□□ -0.38
CYCSP55-201ENST00000399027 TCRBV5S4A2TA0A5A2 114 aa12.67□□□□□ -0.38
CYCSP55-201ENST00000399027 TRAF5O00463 557 aa12.67□□□□□ -0.38
CYCSP55-201ENST00000399027 RHBDL3P58872 404 aa12.67□□□□□ -0.38
CYCSP55-201ENST00000399027 PPP4CP60510 307 aa12.67□□□□□ -0.38
CYCSP55-201ENST00000399027 TNFAIP1Q13829 316 aa12.67□□□□□ -0.38
CYCSP55-201ENST00000399027 FAM83AQ86UY5 434 aa12.67□□□□□ -0.38
CYCSP55-201ENST00000399027 MAGEB6Q8N7X4 407 aa12.67□□□□□ -0.38
CYCSP55-201ENST00000399027 KBTBD3Q8NAB2 608 aa12.67□□□□□ -0.38
CYCSP55-201ENST00000399027 CCDC136Q96JN2 1154 aa12.67□□□□□ -0.38
CYCSP55-201ENST00000399027 IDI2Q9BXS1 227 aa12.67□□□□□ -0.38
CYCSP55-201ENST00000399027 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.67□□□□□ -0.38
CYCSP55-201ENST00000399027 VEZTQ9HBM0 779 aa12.67□□□□□ -0.38
CYCSP55-201ENST00000399027 COL2A1P02458 1487 aaPredicted RBP12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 SSC5DA1L4H1 1573 aa12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 PDE6AP16499 860 aa12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 HSPA6P17066 643 aa12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 CYP7A1P22680 504 aa12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 ADD2P35612 726 aa12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 TNNI2P48788 182 aa12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 APLP1P51693 650 aa12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 FMR1Q06787 632 aaKnown RBP eCLIP12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 SLC9C2Q5TAH2 1124 aa12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 CERS3Q8IU89 383 aa12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 CDCA5Q96FF9 252 aa12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 DEFB129Q9H1M3 183 aa12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 USP40Q9NVE5 1235 aa12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 TMOD2Q9NZR1 351 aa12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 SCAF8Q9UPN6 1271 aaKnown RBP12.66□□□□□ -0.38
CYCSP55-201ENST00000399027 ZNF532Q9HCE3 1301 aa12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 BAZ2AQ9UIF9 1905 aaKnown RBP12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 TCP10L2B9ZVM9 353 aa12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 WDHD1O75717 1129 aaPredicted RBP12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 BAG3O95817 575 aa12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 PLCG2P16885 1265 aa12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 CACNB3P54284 484 aa12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 RASA3Q14644 834 aa12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 UBE3CQ15386 1083 aa12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 CST9Q5W186 159 aa12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 ZSCAN25Q6NSZ9 544 aa12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 DLK2Q6UY11 383 aa12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 TICAM2Q86XR7 235 aa12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 TEPSINQ96N21 525 aa12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 NOL10Q9BSC4 688 aaKnown RBP12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 PPP4R2Q9NY27 417 aa12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 AATFQ9NY61 560 aaKnown RBP eCLIP12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 FAM198AQ9UFP1 575 aa12.65□□□□□ -0.38
CYCSP55-201ENST00000399027 TMEM88BA6NKF7 163 aa12.64□□□□□ -0.39
CYCSP55-201ENST00000399027 ENTPD3O75355 529 aa12.64□□□□□ -0.39
CYCSP55-201ENST00000399027 NFIAQ12857 509 aa12.64□□□□□ -0.39
CYCSP55-201ENST00000399027 FAM151AQ8WW52 585 aa12.64□□□□□ -0.39
CYCSP55-201ENST00000399027 EVI5LQ96CN4 794 aa12.64□□□□□ -0.39
CYCSP55-201ENST00000399027 RIOK1Q9BRS2 568 aaKnown RBP12.64□□□□□ -0.39
CYCSP55-201ENST00000399027 CREBZFQ9NS37 354 aa12.64□□□□□ -0.39
CYCSP55-201ENST00000399027 ATAD5Q96QE3 1844 aa12.64□□□□□ -0.39
CYCSP55-201ENST00000399027 MYH8P13535 1937 aa12.63□□□□□ -0.39
CYCSP55-201ENST00000399027 CELF2O95319 508 aaKnown RBP12.63□□□□□ -0.39
CYCSP55-201ENST00000399027 ZFYP08048 801 aaPredicted RBP12.63□□□□□ -0.39
CYCSP55-201ENST00000399027 LRRFIP1Q32MZ4 808 aaKnown RBP12.63□□□□□ -0.39
CYCSP55-201ENST00000399027 SH3RF3Q8TEJ3 882 aaPredicted RBP12.63□□□□□ -0.39
CYCSP55-201ENST00000399027 DDX4Q9NQI0 724 aaKnown RBP12.63□□□□□ -0.39
CYCSP55-201ENST00000399027 ATRNL1Q5VV63 1379 aa12.63□□□□□ -0.39
CYCSP55-201ENST00000399027 THSD7BQ9C0I4 1608 aa12.62□□□□□ -0.39
CYCSP55-201ENST00000399027 MAGEB6P1A0A0J9YX57 407 aa12.62□□□□□ -0.39
CYCSP55-201ENST00000399027 RNF113AO15541 343 aaKnown RBP12.62□□□□□ -0.39
CYCSP55-201ENST00000399027 CHGBP05060 677 aa12.62□□□□□ -0.39
CYCSP55-201ENST00000399027 NF2P35240 595 aa12.62□□□□□ -0.39
CYCSP55-201ENST00000399027 RGS3P49796 1198 aa12.62□□□□□ -0.39
CYCSP55-201ENST00000399027 DYNLL1P63167 89 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms