RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 SSBP05455 408 aaKnown RBP eCLIP16.58■□□□□ 0.24
RPRD1A-202ENST00000399022 CATIPQ7Z7H3 387 aa16.58■□□□□ 0.24
RPRD1A-202ENST00000399022 ST7Q9NRC1 585 aa16.58■□□□□ 0.24
RPRD1A-202ENST00000399022 HELLSQ9NRZ9 838 aa16.58■□□□□ 0.24
RPRD1A-202ENST00000399022 DBNLQ9UJU6 430 aaKnown RBP16.58■□□□□ 0.24
RPRD1A-202ENST00000399022 CCDC152Q4G0S7 254 aa16.58■□□□□ 0.24
RPRD1A-202ENST00000399022 NGLY1Q96IV0 654 aa16.58■□□□□ 0.24
RPRD1A-202ENST00000399022 ZHX3Q9H4I2 956 aa16.58■□□□□ 0.24
RPRD1A-202ENST00000399022 NEXMIFQ5QGS0 1516 aa16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 B4E1Z4 1266 aa16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 MAP2K2P36507 400 aa16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 AFMP43652 599 aa16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 LRRC24Q50LG9 513 aa16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 ZSWIM6Q9HCJ5 1215 aa16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 MKRN1Q9UHC7 482 aaKnown RBP16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 SSH2Q76I76 1423 aa16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 MYO1CO00159 1063 aa16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 TUBBP07437 444 aa16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 INPP5BP32019 993 aa16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 NLRP5P59047 1200 aa16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 USO1O60763 962 aaKnown RBP16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 ZAP70P43403 619 aa16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 RAD51AP2Q09MP3 1159 aa16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 PPP1R13BQ96KQ4 1090 aa16.57■□□□□ 0.24
RPRD1A-202ENST00000399022 TUBB4BP68371 445 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 PI4K2BQ8TCG2 481 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 TAF4BQ92750 862 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 IQSEC2Q5JU85 1478 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 GPAA1O43292 621 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 ZNF589Q86UQ0 364 aaPredicted RBP16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 ANKRD7Q92527 254 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 LARGE1O95461 756 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 CKAP4Q07065 602 aaKnown RBP16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 E2F4Q16254 413 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 RTN1Q16799 776 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 GDAP1L1Q96MZ0 367 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 KCNF1Q9H3M0 494 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 JAG2Q9Y219 1238 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 TSPY2A6NKD2 308 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 GYS2P54840 703 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 MTX1Q13505 466 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 PDE11AQ9HCR9 933 aa16.56■□□□□ 0.24
RPRD1A-202ENST00000399022 C11orf57Q6ZUT1 292 aaPredicted RBP16.55■□□□□ 0.24
RPRD1A-202ENST00000399022 ZCCHC17Q9NP64 241 aaKnown RBP16.55■□□□□ 0.24
RPRD1A-202ENST00000399022 CAMSAP1Q5T5Y3 1602 aa16.55■□□□□ 0.24
RPRD1A-202ENST00000399022 SASH1O94885 1247 aa16.55■□□□□ 0.24
RPRD1A-202ENST00000399022 DDB1Q16531 1140 aa16.55■□□□□ 0.24
RPRD1A-202ENST00000399022 MED14O60244 1454 aa16.55■□□□□ 0.24
RPRD1A-202ENST00000399022 NDUFAB1O14561 156 aa16.55■□□□□ 0.24
RPRD1A-202ENST00000399022 OPA1O60313 960 aa16.55■□□□□ 0.24
RPRD1A-202ENST00000399022 TAF5LO75529 589 aa16.55■□□□□ 0.24
RPRD1A-202ENST00000399022 MBD4O95243 580 aa16.55■□□□□ 0.24
RPRD1A-202ENST00000399022 EFCC1Q9HA90 598 aa16.55■□□□□ 0.24
RPRD1A-202ENST00000399022 AXIN2Q9Y2T1 843 aa16.55■□□□□ 0.24
RPRD1A-202ENST00000399022 JRKLQ9Y4A0 524 aa16.55■□□□□ 0.24
RPRD1A-202ENST00000399022 EZRP15311 586 aaKnown RBP16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 ACTN2P35609 894 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 SPECC1Q5M775 1068 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 MYL10Q9BUA6 226 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 ADGRB1O14514 1584 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 PSDA5PKW4 1024 aaPredicted RBP16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 AKR1B15C9JRZ8 316 aaPredicted RBP16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 ANKRD65E5RJM6 399 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 LIG3P49916 1009 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 DESI2Q9BSY9 194 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 ZNF202O95125 648 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 ANKRD18AQ8IVF6 992 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 MAP4K1Q92918 833 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 PUS3Q9BZE2 481 aaKnown RBP16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 CCDC113Q9H0I3 377 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 KRT18P05783 430 aaKnown RBP16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 POLA2Q14181 598 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 BRD3Q15059 726 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 BANK1Q8NDB2 785 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 APPBP2Q92624 585 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 SCLT1Q96NL6 688 aa16.54■□□□□ 0.24
RPRD1A-202ENST00000399022 E7EWF7 191 aa16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 RBM5P52756 815 aaKnown RBP eCLIP16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 ENOX2Q16206 610 aaKnown RBP16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 ATL3Q6DD88 541 aa16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 ZNF444Q8N0Y2 327 aaPredicted RBP16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 CCDC114Q96M63 670 aa16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 USP28Q96RU2 1077 aa16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 ERBB3P21860 1342 aa16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 DIP2CQ9Y2E4 1556 aa16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 IFFO1Q0D2I5 559 aa16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 ZSCAN29Q8IWY8 852 aaPredicted RBP16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 TMEM87AQ8NBN3 555 aa16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 VAT1LQ9HCJ6 419 aa16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 USP27XA6NNY8 438 aa16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 ADKP55263 362 aaKnown RBP16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 KRT23Q9C075 422 aa16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 CPS1P31327 1500 aa16.53■□□□□ 0.24
RPRD1A-202ENST00000399022 COPRSQ9NQ92 184 aa16.52■□□□□ 0.24
RPRD1A-202ENST00000399022 KIAA1468Q9P260 1216 aa16.52■□□□□ 0.24
RPRD1A-202ENST00000399022 STX8Q9UNK0 236 aa16.52■□□□□ 0.24
RPRD1A-202ENST00000399022 GOLGA6CA6NDK9 693 aa16.52■□□□□ 0.24
RPRD1A-202ENST00000399022 GOLGA6DP0CG33 693 aa16.52■□□□□ 0.24
RPRD1A-202ENST00000399022 NLRP12P59046 1061 aa16.52■□□□□ 0.24
RPRD1A-202ENST00000399022 KANK3Q6NY19 840 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms