RNA–Protein interactions for RNA: ENST00000394049.5

KRT222-201, Transcript of keratin 222, humanhuman

TSL 1 (best)

Gene KRT222, Length 2,764 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT222-201ENST00000394049 PHF20L1A8MW92 1017 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 SPATA31C2B4DYI2 1134 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 IRS4O14654 1257 aaPredicted RBP4.42□□□□□ -1.7
KRT222-201ENST00000394049 F11P03951 625 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 MAPTP10636 758 aaKnown RBP4.42□□□□□ -1.7
KRT222-201ENST00000394049 EDN3P14138 238 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 CLCQ05315 142 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 HIF1AQ16665 826 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 MPRIPQ6WCQ1 1025 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 NUCKS1Q9H1E3 243 aaKnown RBP4.42□□□□□ -1.7
KRT222-201ENST00000394049 BRMS1Q9HCU9 246 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 STRIP2Q9ULQ0 834 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 TRAK1Q9UPV9 953 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 DYRK1BQ9Y463 629 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 ABCA10Q8WWZ4 1543 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 GPC1P35052 558 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 ZEB1P37275 1124 aaPredicted RBP4.42□□□□□ -1.7
KRT222-201ENST00000394049 CBX2Q14781 532 aaPredicted RBP4.42□□□□□ -1.7
KRT222-201ENST00000394049 WDR75Q8IWA0 830 aaKnown RBP4.42□□□□□ -1.7
KRT222-201ENST00000394049 TRPM4Q8TD43 1214 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 CRBNQ96SW2 442 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 TMEM260Q9NX78 707 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 PTCH2Q9Y6C5 1203 aa4.42□□□□□ -1.7
KRT222-201ENST00000394049 CHD1O14646 1710 aa4.41□□□□□ -1.7
KRT222-201ENST00000394049 RARAP10276 462 aa4.41□□□□□ -1.7
KRT222-201ENST00000394049 EPB42P16452 691 aa4.41□□□□□ -1.7
KRT222-201ENST00000394049 AXDND1Q5T1B0 1012 aaPredicted RBP4.41□□□□□ -1.7
KRT222-201ENST00000394049 MRM1Q6IN84 353 aaKnown RBP4.41□□□□□ -1.7
KRT222-201ENST00000394049 PRPF38AQ8NAV1 312 aaKnown RBP4.41□□□□□ -1.7
KRT222-201ENST00000394049 FEZ1Q99689 392 aa4.41□□□□□ -1.7
KRT222-201ENST00000394049 SEC31BQ9NQW1 1179 aa4.41□□□□□ -1.7
KRT222-201ENST00000394049 KCNQ5Q9NR82 932 aa4.41□□□□□ -1.7
KRT222-201ENST00000394049 NXF1Q9UBU9 619 aaKnown RBP4.41□□□□□ -1.7
KRT222-201ENST00000394049 PDE6BP35913 854 aa4.41□□□□□ -1.7
KRT222-201ENST00000394049 HSP90AB2PQ58FF8 381 aa4.41□□□□□ -1.7
KRT222-201ENST00000394049 DALRD3Q5D0E6 543 aaKnown RBP4.41□□□□□ -1.7
KRT222-201ENST00000394049 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.41□□□□□ -1.7
KRT222-201ENST00000394049 AGMOQ6ZNB7 445 aa4.41□□□□□ -1.7
KRT222-201ENST00000394049 LSRQ86X29 649 aaPredicted RBP4.41□□□□□ -1.7
KRT222-201ENST00000394049 TRIM42Q8IWZ5 723 aa4.41□□□□□ -1.7
KRT222-201ENST00000394049 CCDC146Q8IYE0 955 aa4.41□□□□□ -1.7
KRT222-201ENST00000394049 WHAMMQ8TF30 809 aa4.41□□□□□ -1.7
KRT222-201ENST00000394049 NECAB3Q96P71 396 aaPredicted RBP4.41□□□□□ -1.7
KRT222-201ENST00000394049 COL25A1Q9BXS0 654 aaPredicted RBP4.41□□□□□ -1.7
KRT222-201ENST00000394049 DZANK1Q9NVP4 752 aa4.41□□□□□ -1.7
KRT222-201ENST00000394049 ABCA5Q8WWZ7 1642 aa4.41□□□□□ -1.7
KRT222-201ENST00000394049 LMNB1P20700 586 aa4.4□□□□□ -1.7
KRT222-201ENST00000394049 LMNB2Q03252 620 aa4.4□□□□□ -1.7
KRT222-201ENST00000394049 PLAURQ03405 335 aa4.4□□□□□ -1.7
KRT222-201ENST00000394049 TNNI3KQ59H18 835 aa4.4□□□□□ -1.7
KRT222-201ENST00000394049 C16orf86Q6ZW13 317 aa4.4□□□□□ -1.7
KRT222-201ENST00000394049 CCNJLQ8IV13 435 aa4.4□□□□□ -1.7
KRT222-201ENST00000394049 SLITRK4Q8IW52 837 aa4.4□□□□□ -1.7
KRT222-201ENST00000394049 BRINP2Q9C0B6 783 aa4.4□□□□□ -1.7
KRT222-201ENST00000394049 MYH16Q9H6N6 1097 aa4.4□□□□□ -1.7
KRT222-201ENST00000394049 PRKAB1Q9Y478 270 aa4.4□□□□□ -1.7
KRT222-201ENST00000394049 GRIN2BQ13224 1484 aa4.4□□□□□ -1.7
KRT222-201ENST00000394049 GAPVD1Q14C86 1478 aa4.4□□□□□ -1.7
KRT222-201ENST00000394049 PBRM1Q86U86 1689 aa4.4□□□□□ -1.71
KRT222-201ENST00000394049 NFKB1P19838 968 aa4.4□□□□□ -1.71
KRT222-201ENST00000394049 CDC25BP30305 580 aa4.4□□□□□ -1.71
KRT222-201ENST00000394049 GMPRP36959 345 aa4.4□□□□□ -1.71
KRT222-201ENST00000394049 GIPRP48546 466 aa4.4□□□□□ -1.71
KRT222-201ENST00000394049 CDK8P49336 464 aa4.4□□□□□ -1.71
KRT222-201ENST00000394049 PTPN11Q06124 597 aaPredicted RBP4.4□□□□□ -1.71
KRT222-201ENST00000394049 SSRP1Q08945 709 aaKnown RBP4.4□□□□□ -1.71
KRT222-201ENST00000394049 C8orf86Q6ZUL3 223 aa4.4□□□□□ -1.71
KRT222-201ENST00000394049 GRIN3AQ8TCU5 1115 aa4.4□□□□□ -1.71
KRT222-201ENST00000394049 PMM1Q92871 262 aa4.4□□□□□ -1.71
KRT222-201ENST00000394049 BHMTQ93088 406 aa4.4□□□□□ -1.71
KRT222-201ENST00000394049 PPM1HQ9ULR3 514 aa4.4□□□□□ -1.71
KRT222-201ENST00000394049 PCDHB10Q9UN67 800 aa4.4□□□□□ -1.71
KRT222-201ENST00000394049 SNAPC4Q5SXM2 1469 aa4.4□□□□□ -1.71
KRT222-201ENST00000394049 MAGI1Q96QZ7 1491 aaPredicted RBP4.4□□□□□ -1.71
KRT222-201ENST00000394049 TBX4P57082 545 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 C2orf27AQ580R0 203 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 SV2BQ7L1I2 683 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 STK35Q8TDR2 534 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 CCDC113Q9H0I3 377 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 MIR1-1HGQ9H1L0 117 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 FAM86C1Q9NVL1 165 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 KLF15Q9UIH9 416 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 RBAK-RBAKDNI3L0D1 243 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 J3QW42 95 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 ATP11AP98196 1134 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 LRRC41Q15345 812 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 CWF19L2Q2TBE0 894 aaKnown RBP4.39□□□□□ -1.71
KRT222-201ENST00000394049 REC114Q7Z4M0 266 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 OR13H1Q8NG92 308 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 GATAD2BQ8WXI9 593 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 RBSNQ9H1K0 784 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 CBX8Q9HC52 389 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 SENP2Q9HC62 589 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 HOMER2Q9NSB8 354 aa4.39□□□□□ -1.71
KRT222-201ENST00000394049 FAM221AA4D161 298 aa4.38□□□□□ -1.71
KRT222-201ENST00000394049 PLEKHD1A6NEE1 506 aa4.38□□□□□ -1.71
KRT222-201ENST00000394049 ATXN7O15265 892 aaPredicted RBP4.38□□□□□ -1.71
KRT222-201ENST00000394049 MYCLP1P12525 358 aaPredicted RBP4.38□□□□□ -1.71
KRT222-201ENST00000394049 RASGRF1Q13972 1273 aa4.38□□□□□ -1.71
KRT222-201ENST00000394049 ZYXQ15942 572 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms