RNA–Protein interactions for RNA: ENST00000394049.5

KRT222-201, Transcript of keratin 222, humanhuman

TSL 1 (best)

Gene KRT222, Length 2,764 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT222-201ENST00000394049 AEBP2Q6ZN18 517 aaPredicted RBP12.53□□□□□ -0.4
KRT222-201ENST00000394049 CHIC1Q5VXU3 224 aa12.07□□□□□ -0.48
KRT222-201ENST00000394049 PHF23Q9BUL5 403 aaPredicted RBP10.84□□□□□ -0.67
KRT222-201ENST00000394049 SENP3Q9H4L4 574 aaPredicted RBP10.28□□□□□ -0.76
KRT222-201ENST00000394049 PLPPR3Q6T4P5 718 aa9.77□□□□□ -0.84
KRT222-201ENST00000394049 FOXD1Q16676 465 aa9.77□□□□□ -0.85
KRT222-201ENST00000394049 PPP6R1Q9UPN7 881 aa9.63□□□□□ -0.87
KRT222-201ENST00000394049 ADRA2BP18089 450 aa9.6□□□□□ -0.87
KRT222-201ENST00000394049 PIAS4Q8N2W9 510 aaPredicted RBP9.22□□□□□ -0.93
KRT222-201ENST00000394049 POTEDQ86YR6 584 aa9.02□□□□□ -0.97
KRT222-201ENST00000394049 KCNA4P22459 653 aa8.83□□□□□ -1
KRT222-201ENST00000394049 MAPK8IP2Q13387 824 aaPredicted RBP8.75□□□□□ -1.01
KRT222-201ENST00000394049 PPP4R3CPQ6ZMV5 832 aa8.73□□□□□ -1.01
KRT222-201ENST00000394049 MSH5O43196 834 aa8.67□□□□□ -1.02
KRT222-201ENST00000394049 EHMT2Q96KQ7 1210 aa8.65□□□□□ -1.03
KRT222-201ENST00000394049 NPM3O75607 178 aaKnown RBP8.47□□□□□ -1.05
KRT222-201ENST00000394049 CNKSR2Q8WXI2 1034 aa8.33□□□□□ -1.08
KRT222-201ENST00000394049 SCAF1Q9H7N4 1312 aaKnown RBP8.33□□□□□ -1.08
KRT222-201ENST00000394049 NCBP3Q53F19 620 aaKnown RBP8.3□□□□□ -1.08
KRT222-201ENST00000394049 SLC4A1APQ9BWU0 796 aaKnown RBP8.27□□□□□ -1.09
KRT222-201ENST00000394049 DMRT2Q9Y5R5 561 aa8.26□□□□□ -1.09
KRT222-201ENST00000394049 ZBTB22O15209 634 aa8.21□□□□□ -1.1
KRT222-201ENST00000394049 CSRNP3Q8WYN3 585 aa8.18□□□□□ -1.1
KRT222-201ENST00000394049 DCAF8L1A6NGE4 600 aa8.16□□□□□ -1.1
KRT222-201ENST00000394049 RNF216Q9NWF9 866 aaPredicted RBP8.14□□□□□ -1.11
KRT222-201ENST00000394049 HOXD11P31277 338 aaPredicted RBP8.1□□□□□ -1.11
KRT222-201ENST00000394049 SLC4A2P04920 1241 aa8.03□□□□□ -1.12
KRT222-201ENST00000394049 FOXD4L1Q9NU39 408 aa7.86□□□□□ -1.15
KRT222-201ENST00000394049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.82□□□□□ -1.16
KRT222-201ENST00000394049 ATF5Q9Y2D1 282 aaPredicted RBP7.79□□□□□ -1.16
KRT222-201ENST00000394049 U3KPZ7 1027 aaPredicted RBP7.78□□□□□ -1.16
KRT222-201ENST00000394049 DNAJC5BQ9UF47 199 aa7.77□□□□□ -1.17
KRT222-201ENST00000394049 SLC24A1O60721 1099 aa7.75□□□□□ -1.17
KRT222-201ENST00000394049 RTN4Q9NQC3 1192 aaKnown RBP7.72□□□□□ -1.17
KRT222-201ENST00000394049 SPINK5Q9NQ38 1064 aaPredicted RBP7.67□□□□□ -1.18
KRT222-201ENST00000394049 MYCNP04198 464 aaPredicted RBP7.64□□□□□ -1.19
KRT222-201ENST00000394049 RNF39Q9H2S5 420 aa7.6□□□□□ -1.19
KRT222-201ENST00000394049 TRHP20396 242 aaPredicted RBP7.56□□□□□ -1.2
KRT222-201ENST00000394049 ABCB7O75027 752 aa7.52□□□□□ -1.21
KRT222-201ENST00000394049 AMER1Q5JTC6 1135 aaPredicted RBP7.51□□□□□ -1.21
KRT222-201ENST00000394049 CAPN15O75808 1086 aa7.5□□□□□ -1.21
KRT222-201ENST00000394049 SAMD1Q6SPF0 538 aaPredicted RBP7.43□□□□□ -1.22
KRT222-201ENST00000394049 POLA2Q14181 598 aa7.42□□□□□ -1.22
KRT222-201ENST00000394049 ZNF219Q9P2Y4 722 aaPredicted RBP7.41□□□□□ -1.22
KRT222-201ENST00000394049 FKBP8Q14318 412 aa7.38□□□□□ -1.23
KRT222-201ENST00000394049 CACNB1Q02641 598 aaPredicted RBP7.37□□□□□ -1.23
KRT222-201ENST00000394049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.37□□□□□ -1.23
KRT222-201ENST00000394049 C1QBPQ07021 282 aaKnown RBP7.37□□□□□ -1.23
KRT222-201ENST00000394049 HNRNPUL2Q1KMD3 747 aaKnown RBP7.37□□□□□ -1.23
KRT222-201ENST00000394049 ATXN8OSP0DMR3 200 aa7.36□□□□□ -1.23
KRT222-201ENST00000394049 MKRN4PQ13434 485 aaPredicted RBP7.36□□□□□ -1.23
KRT222-201ENST00000394049 DSG3P32926 999 aa7.31□□□□□ -1.24
KRT222-201ENST00000394049 OSCARQ8IYS5 282 aa7.22□□□□□ -1.25
KRT222-201ENST00000394049 APLP2Q06481 763 aa7.14□□□□□ -1.27
KRT222-201ENST00000394049 SPDYE4A6NLX3 237 aa7.12□□□□□ -1.27
KRT222-201ENST00000394049 FBLN2P98095 1184 aa7.07□□□□□ -1.28
KRT222-201ENST00000394049 PRKCSHP14314 528 aaPredicted RBP7.03□□□□□ -1.28
KRT222-201ENST00000394049 ZNF692Q9BU19 519 aaPredicted RBP7.02□□□□□ -1.29
KRT222-201ENST00000394049 PABPN1Q86U42 306 aaKnown RBP eCLIP6.99□□□□□ -1.29
KRT222-201ENST00000394049 PLCB2Q00722 1185 aa6.98□□□□□ -1.29
KRT222-201ENST00000394049 HAP1P54257 671 aaPredicted RBP6.97□□□□□ -1.29
KRT222-201ENST00000394049 DCAF8L2P0C7V8 631 aa6.96□□□□□ -1.3
KRT222-201ENST00000394049 ZBTB12Q9Y330 459 aaPredicted RBP6.91□□□□□ -1.3
KRT222-201ENST00000394049 SSUH2Q9Y2M2 353 aa6.91□□□□□ -1.3
KRT222-201ENST00000394049 PROM2Q8N271 834 aa6.9□□□□□ -1.31
KRT222-201ENST00000394049 CLEC11AQ9Y240 323 aa6.89□□□□□ -1.31
KRT222-201ENST00000394049 SPDYE2BA6NHP3 402 aa6.88□□□□□ -1.31
KRT222-201ENST00000394049 SPDYE6P0CI01 402 aa6.88□□□□□ -1.31
KRT222-201ENST00000394049 SPDYE2Q495Y8 402 aa6.88□□□□□ -1.31
KRT222-201ENST00000394049 IFNLR1Q8IU57 520 aaPredicted RBP6.88□□□□□ -1.31
KRT222-201ENST00000394049 POTEHQ6S545 545 aa6.86□□□□□ -1.31
KRT222-201ENST00000394049 VASPP50552 380 aaPredicted RBP6.85□□□□□ -1.31
KRT222-201ENST00000394049 TAOK2Q9UL54 1235 aa6.84□□□□□ -1.31
KRT222-201ENST00000394049 BCANQ96GW7 911 aa6.83□□□□□ -1.32
KRT222-201ENST00000394049 REM2Q8IYK8 340 aaPredicted RBP6.82□□□□□ -1.32
KRT222-201ENST00000394049 PITPNM1O00562 1244 aa6.8□□□□□ -1.32
KRT222-201ENST00000394049 CHADLQ6NUI6 762 aa6.8□□□□□ -1.32
KRT222-201ENST00000394049 TPRNQ4KMQ1 711 aa6.79□□□□□ -1.32
KRT222-201ENST00000394049 FBXO3Q9UK99 471 aa6.79□□□□□ -1.32
KRT222-201ENST00000394049 MIER1Q8N108 512 aa6.77□□□□□ -1.33
KRT222-201ENST00000394049 PKD2Q13563 968 aa6.76□□□□□ -1.33
KRT222-201ENST00000394049 PLCD3Q8N3E9 789 aa6.75□□□□□ -1.33
KRT222-201ENST00000394049 KDM2AQ9Y2K7 1162 aa6.75□□□□□ -1.33
KRT222-201ENST00000394049 KLHL34Q8N239 644 aa6.73□□□□□ -1.33
KRT222-201ENST00000394049 AKT1S1Q96B36 256 aa6.72□□□□□ -1.33
KRT222-201ENST00000394049 RBM42Q9BTD8 480 aaKnown RBP6.72□□□□□ -1.33
KRT222-201ENST00000394049 VSIG10Q8N0Z9 540 aa6.7□□□□□ -1.34
KRT222-201ENST00000394049 CFAP44Q96MT7 982 aa6.7□□□□□ -1.34
KRT222-201ENST00000394049 PRR29P0C7W0 189 aa6.69□□□□□ -1.34
KRT222-201ENST00000394049 PAXIP1Q6ZW49 1069 aaPredicted RBP6.69□□□□□ -1.34
KRT222-201ENST00000394049 NPM1P06748 294 aaKnown RBP eCLIP6.68□□□□□ -1.34
KRT222-201ENST00000394049 CREBZFQ9NS37 354 aa6.67□□□□□ -1.34
KRT222-201ENST00000394049 SPDYE1Q8NFV5 336 aaPredicted RBP6.66□□□□□ -1.34
KRT222-201ENST00000394049 MNX1P50219 401 aaPredicted RBP6.65□□□□□ -1.35
KRT222-201ENST00000394049 CHRDL2Q6WN34 429 aa6.63□□□□□ -1.35
KRT222-201ENST00000394049 RASEFQ8IZ41 740 aa6.62□□□□□ -1.35
KRT222-201ENST00000394049 CIZ1Q9ULV3 898 aaPredicted RBP6.62□□□□□ -1.35
KRT222-201ENST00000394049 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.62□□□□□ -1.35
KRT222-201ENST00000394049 PRKAR2AP13861 404 aaKnown RBP6.61□□□□□ -1.35
KRT222-201ENST00000394049 ECM2O94769 699 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms