RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 STK36Q9NRP7 1315 aa12.56□□□□□ -0.4
NLRP3-205ENST00000391827 SPTLC2O15270 562 aa12.56□□□□□ -0.4
NLRP3-205ENST00000391827 CRKLP46109 303 aaKnown RBP12.56□□□□□ -0.4
NLRP3-205ENST00000391827 NEDD4P46934 1319 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 GNAT2P19087 354 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 STK38Q15208 465 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 CCDC152Q4G0S7 254 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 OTUD7BQ6GQQ9 843 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 CPLX2Q6PUV4 134 aaKnown RBP12.55□□□□□ -0.4
NLRP3-205ENST00000391827 BPIFA3Q9BQP9 254 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 CNNM2Q9H8M5 875 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 LY9Q9HBG7 655 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 EPB41L4AQ9HCS5 686 aaPredicted RBP12.55□□□□□ -0.4
NLRP3-205ENST00000391827 ECM29Q5VYK3 1845 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 KIF28PB7ZC32 967 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 GOLGA6L19H0YKK7 550 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 NTSR2O95665 410 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 PTGS1P23219 599 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 ANO1Q5XXA6 986 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 IFNL3Q8IZI9 196 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 MPHOSPH8Q99549 860 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 DENND2AQ9ULE3 1009 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 COL5A3P25940 1745 aaPredicted RBP12.55□□□□□ -0.4
NLRP3-205ENST00000391827 PPFIA3O75145 1194 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 APPP05067 770 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 NTRK3Q16288 839 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 PPP4R3BQ5MIZ7 849 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 DHX40Q8IX18 779 aaKnown RBP12.55□□□□□ -0.4
NLRP3-205ENST00000391827 CEP57L1Q8IYX8 460 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 NKX2-3Q8TAU0 364 aa12.55□□□□□ -0.4
NLRP3-205ENST00000391827 NAT10Q9H0A0 1025 aaKnown RBP12.55□□□□□ -0.4
NLRP3-205ENST00000391827 CHD4Q14839 1912 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 B4E1Z4 1266 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 CMA1P23946 247 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 NDUFA8P51970 172 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 SLC39A14Q15043 492 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 DDB1Q16531 1140 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 AXDND1Q5T1B0 1012 aaPredicted RBP12.54□□□□□ -0.4
NLRP3-205ENST00000391827 SYNE3Q6ZMZ3 975 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 KRT23Q9C075 422 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 LOC102724428A0A0B4J2F2 783 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 FAM237AA0A1B0GTK4 181 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 RGL2O15211 777 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 ZBTB43O43298 467 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 POLR3DP05423 398 aaPredicted RBP12.54□□□□□ -0.4
NLRP3-205ENST00000391827 RCAN1P53805 252 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 SIK1P57059 783 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 SF3A1Q15459 793 aaKnown RBP12.54□□□□□ -0.4
NLRP3-205ENST00000391827 DNTTIP2Q5QJE6 756 aaKnown RBP12.54□□□□□ -0.4
NLRP3-205ENST00000391827 CCDC186Q7Z3E2 898 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 MAGEB6Q8N7X4 407 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 HELBQ8NG08 1087 aaPredicted RBP12.54□□□□□ -0.4
NLRP3-205ENST00000391827 STAG1Q8WVM7 1258 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 TIGD1Q96MW7 591 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 ALG1Q9BT22 464 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 GTPBP4Q9BZE4 634 aaKnown RBP12.54□□□□□ -0.4
NLRP3-205ENST00000391827 NAPBQ9H115 298 aa12.54□□□□□ -0.4
NLRP3-205ENST00000391827 GSG1L2A8MUP6 293 aa12.53□□□□□ -0.4
NLRP3-205ENST00000391827 PPP6R2O75170 966 aa12.53□□□□□ -0.4
NLRP3-205ENST00000391827 MBD4O95243 580 aa12.53□□□□□ -0.4
NLRP3-205ENST00000391827 U2AF2P26368 475 aaKnown RBP eCLIP12.53□□□□□ -0.4
NLRP3-205ENST00000391827 CDC27P30260 824 aa12.53□□□□□ -0.4
NLRP3-205ENST00000391827 ATP6V1AP38606 617 aa12.53□□□□□ -0.4
NLRP3-205ENST00000391827 IGHMBP2P38935 993 aaKnown RBP12.53□□□□□ -0.4
NLRP3-205ENST00000391827 C17orf53Q8N3J3 647 aaPredicted RBP12.53□□□□□ -0.4
NLRP3-205ENST00000391827 FAM217BQ9NTX9 383 aaPredicted RBP12.53□□□□□ -0.4
NLRP3-205ENST00000391827 KIAA1468Q9P260 1216 aa12.53□□□□□ -0.4
NLRP3-205ENST00000391827 CLIP2Q9UDT6 1046 aa12.53□□□□□ -0.4
NLRP3-205ENST00000391827 A0A1B0GVL5 298 aa12.53□□□□□ -0.4
NLRP3-205ENST00000391827 NEMFO60524 1076 aa12.53□□□□□ -0.4
NLRP3-205ENST00000391827 ZSCAN20P17040 1043 aaPredicted RBP12.53□□□□□ -0.4
NLRP3-205ENST00000391827 AKNAD1Q5T1N1 836 aa12.53□□□□□ -0.4
NLRP3-205ENST00000391827 KRT40Q6A162 431 aa12.53□□□□□ -0.4
NLRP3-205ENST00000391827 PRDM10Q9NQV6 1147 aa12.53□□□□□ -0.4
NLRP3-205ENST00000391827 SEC31BQ9NQW1 1179 aa12.53□□□□□ -0.4
NLRP3-205ENST00000391827 A0A1B0GUL6 1792 aa12.53□□□□□ -0.4
NLRP3-205ENST00000391827 ZNF804BA4D1E1 1349 aa12.52□□□□□ -0.4
NLRP3-205ENST00000391827 ITPK1Q13572 414 aa12.52□□□□□ -0.4
NLRP3-205ENST00000391827 TMEM67Q5HYA8 995 aa12.52□□□□□ -0.4
NLRP3-205ENST00000391827 VPS37DQ86XT2 251 aa12.52□□□□□ -0.4
NLRP3-205ENST00000391827 CCDC94Q9BW85 323 aaPredicted RBP12.52□□□□□ -0.4
NLRP3-205ENST00000391827 MYH14Q7Z406 1995 aaKnown RBP12.52□□□□□ -0.4
NLRP3-205ENST00000391827 RBM6P78332 1123 aaKnown RBP12.52□□□□□ -0.41
NLRP3-205ENST00000391827 BARGINQ6ZT62 677 aa12.52□□□□□ -0.41
NLRP3-205ENST00000391827 MARCH10Q8NA82 808 aaPredicted RBP12.52□□□□□ -0.41
NLRP3-205ENST00000391827 SDF4Q9BRK5 362 aa12.52□□□□□ -0.41
NLRP3-205ENST00000391827 NACAP1Q9BZK3 213 aa12.52□□□□□ -0.41
NLRP3-205ENST00000391827 ZSWIM5Q9P217 1185 aa12.52□□□□□ -0.41
NLRP3-205ENST00000391827 GOLGA8AA7E2F4 631 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 RANBP6O60518 1105 aaKnown RBP12.51□□□□□ -0.41
NLRP3-205ENST00000391827 IFNAR1P17181 557 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 IARSP41252 1262 aaKnown RBP12.51□□□□□ -0.41
NLRP3-205ENST00000391827 PTPAQ15257 358 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 CLEC4GQ6UXB4 293 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 RAB11FIP4Q86YS3 637 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 DRC7Q8IY82 874 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 JMYQ8N9B5 988 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 CDC5LQ99459 802 aaKnown RBP12.51□□□□□ -0.41
NLRP3-205ENST00000391827 SENP2Q9HC62 589 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms