RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	ATP2B4	P23634	1241 aa		13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	PRDX5	P30044	214 aa		13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	CCT2	P78371	535 aa	Known RBP	13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	DPP8	Q6V1X1	898 aa	Predicted RBP	13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	TTC14	Q96N46	770 aa		13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	TPCN1	Q9ULQ1	816 aa		13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	LY75	O60449	1722 aa		13.71	□□□□□ -0.21
LMO7-204	ENST00000377499		F8W031	263 aa	Predicted RBP	13.71	□□□□□ -0.21
LMO7-204	ENST00000377499	ALDH1B1	P30837	517 aa		13.71	□□□□□ -0.21
LMO7-204	ENST00000377499	MCM4	P33991	863 aa		13.71	□□□□□ -0.21
LMO7-204	ENST00000377499	DYNLL1	P63167	89 aa	Known RBP	13.71	□□□□□ -0.21
LMO7-204	ENST00000377499	ME3	Q16798	604 aa		13.71	□□□□□ -0.21
LMO7-204	ENST00000377499	MCTP1	Q6DN14	999 aa		13.71	□□□□□ -0.21
LMO7-204	ENST00000377499	NFXL1	Q6ZNB6	911 aa		13.71	□□□□□ -0.21
LMO7-204	ENST00000377499	STOX1	Q6ZVD7	989 aa		13.71	□□□□□ -0.21
LMO7-204	ENST00000377499	FBXO33	Q7Z6M2	555 aa		13.71	□□□□□ -0.21
LMO7-204	ENST00000377499	NCOA7	Q8NI08	942 aa		13.71	□□□□□ -0.21
LMO7-204	ENST00000377499	STRBP	Q96SI9	672 aa	Known RBP	13.71	□□□□□ -0.21
LMO7-204	ENST00000377499	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.71	□□□□□ -0.21
LMO7-204	ENST00000377499	SPEF2	Q9C093	1822 aa		13.71	□□□□□ -0.21
LMO7-204	ENST00000377499	LDHB	P07195	334 aa	Known RBP	13.71	□□□□□ -0.22
LMO7-204	ENST00000377499	APOBR	Q0VD83	1088 aa		13.71	□□□□□ -0.22
LMO7-204	ENST00000377499	MPND	Q8N594	471 aa		13.71	□□□□□ -0.22
LMO7-204	ENST00000377499	DDX11	Q96FC9	970 aa		13.71	□□□□□ -0.22
LMO7-204	ENST00000377499	NPR1	P16066	1061 aa		13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	CHRNA5	P30532	468 aa		13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	CTDSPL2	Q05D32	466 aa		13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	IFNL3	Q8IZI9	196 aa		13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	TAF1L	Q8IZX4	1826 aa		13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	DDX60	Q8IY21	1712 aa	Known RBP	13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	DOK7	Q18PE1	504 aa		13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	FAM184A	Q8NB25	1140 aa		13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	BCOR	Q6W2J9	1755 aa		13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	KDM4A	O75164	1064 aa		13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	GJB2	P29033	226 aa		13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	CAMKK2	Q96RR4	588 aa		13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	SCN7A	Q01118	1682 aa		13.7	□□□□□ -0.22
LMO7-204	ENST00000377499	PRC1	O43663	620 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499	MECOM	Q03112	1051 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499	RAB3GAP1	Q15042	981 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499	TICAM2	Q86XR7	235 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499	CRAMP1	Q96RY5	1269 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499	TUBGCP6	Q96RT7	1819 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499	MCM5	P33992	734 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499	CRY2	Q49AN0	593 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499	INCENP	Q9NQS7	918 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499	ZNF831	Q5JPB2	1677 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499		B4E1Z4	1266 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499	SEMA3E	O15041	775 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499	SRGN	P10124	158 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499	WDR66	Q8TBY9	1149 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499	MASTL	Q96GX5	879 aa		13.69	□□□□□ -0.22
LMO7-204	ENST00000377499	GNAT2	P19087	354 aa		13.68	□□□□□ -0.22
LMO7-204	ENST00000377499	USP5	P45974	858 aa		13.68	□□□□□ -0.22
LMO7-204	ENST00000377499	GTF2I	P78347	998 aa		13.68	□□□□□ -0.22
LMO7-204	ENST00000377499	TBC1D16	Q8TBP0	767 aa		13.68	□□□□□ -0.22
LMO7-204	ENST00000377499	KCNB2	Q92953	911 aa		13.68	□□□□□ -0.22
LMO7-204	ENST00000377499	INTS4	Q96HW7	963 aa	Known RBP	13.68	□□□□□ -0.22
LMO7-204	ENST00000377499	LARP1B	Q659C4	914 aa	Known RBP	13.68	□□□□□ -0.22
LMO7-204	ENST00000377499	MFSD6	Q6ZSS7	791 aa		13.68	□□□□□ -0.22
LMO7-204	ENST00000377499	CIC	Q96RK0	1608 aa	Predicted RBP	13.68	□□□□□ -0.22
LMO7-204	ENST00000377499	TCRBV5S4A2T	A0A5A2	114 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	DDX11L8	A8MPP1	907 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	CPLX1	O14810	134 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	CUL4A	Q13619	759 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	DIXDC1	Q155Q3	683 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	TMX1	Q9H3N1	280 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	CD209	Q9NNX6	404 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	GPHN	Q9NQX3	736 aa	Predicted RBP	13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	POLL	Q9UGP5	575 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	COL4A1	P02462	1669 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	DYNC1I1	O14576	645 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	TAF3	Q5VWG9	929 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	ADGRA1	Q86SQ6	560 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	LOC102724159	A0A0B4J2E5	919 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	ERICH4	A6NGS2	130 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499		H3BQV1	296 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	ZBTB7A	O95365	584 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	TOB2	Q14106	344 aa	Predicted RBP	13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	PWP2	Q15269	919 aa	Known RBP	13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	TSGA10IP	Q3SY00	556 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	MFSD14B	Q5SR56	506 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	IFFO2	Q5TF58	517 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	CHAMP1	Q96JM3	812 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	ZKSCAN3	Q9BRR0	538 aa		13.67	□□□□□ -0.22
LMO7-204	ENST00000377499	ERICH2	A1L162	156 aa		13.66	□□□□□ -0.22
LMO7-204	ENST00000377499	SP8	Q8IXZ3	490 aa		13.66	□□□□□ -0.22
LMO7-204	ENST00000377499	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.66	□□□□□ -0.22
LMO7-204	ENST00000377499	ATP6V0A2	Q9Y487	856 aa		13.66	□□□□□ -0.22
LMO7-204	ENST00000377499	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.66	□□□□□ -0.22
LMO7-204	ENST00000377499	KLF18	A0A0U1RQI7	1052 aa		13.66	□□□□□ -0.22
LMO7-204	ENST00000377499	CLGN	O14967	610 aa		13.66	□□□□□ -0.22
LMO7-204	ENST00000377499	RANBP6	O60518	1105 aa	Known RBP	13.66	□□□□□ -0.22
LMO7-204	ENST00000377499	FERMT3	Q86UX7	667 aa		13.66	□□□□□ -0.22
LMO7-204	ENST00000377499	CCDC144CP	Q8IYA2	1237 aa		13.66	□□□□□ -0.22
LMO7-204	ENST00000377499	NCOA5	Q9HCD5	579 aa	Known RBP	13.66	□□□□□ -0.22
LMO7-204	ENST00000377499	C4A	P0C0L4	1744 aa		13.66	□□□□□ -0.22

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