RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 TEX13AQ9BXU3 409 aaPredicted RBP10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 CWC15Q9P013 229 aaKnown RBP10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 MED23Q9ULK4 1368 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 CASP8Q14790 479 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 SYNE3Q6ZMZ3 975 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 NUP133Q8WUM0 1156 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 MED4Q9NPJ6 270 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 SALL1Q9NSC2 1324 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 PTPRUQ92729 1446 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 IDH1O75874 414 aaKnown RBP10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 CAVIN2O95810 425 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 MYBL2P10244 700 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 FDPSP14324 419 aaKnown RBP10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 GNG11P61952 73 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 BPIFA3Q9BQP9 254 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 CD248Q9HCU0 757 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 ANO10Q9NW15 660 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 MAP3K5Q99683 1374 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 MYO1FO00160 1098 aa10.02□□□□□ -0.8
SMARCA1-203ENST00000371123 GPS2Q13227 327 aa10.02□□□□□ -0.8
SMARCA1-203ENST00000371123 VSTM4Q8IW00 320 aa10.02□□□□□ -0.8
SMARCA1-203ENST00000371123 MICALL1Q8N3F8 863 aa10.02□□□□□ -0.8
SMARCA1-203ENST00000371123 NSUN7Q8NE18 718 aaKnown RBP10.02□□□□□ -0.8
SMARCA1-203ENST00000371123 RNF217Q8TC41 542 aa10.02□□□□□ -0.8
SMARCA1-203ENST00000371123 MTX1Q13505 466 aa10.02□□□□□ -0.81
SMARCA1-203ENST00000371123 SPECC1Q5M775 1068 aa10.02□□□□□ -0.81
SMARCA1-203ENST00000371123 ALDH8A1Q9H2A2 487 aaPredicted RBP10.02□□□□□ -0.81
SMARCA1-203ENST00000371123 WDHD1O75717 1129 aaPredicted RBP10.02□□□□□ -0.81
SMARCA1-203ENST00000371123 RAD9BQ6WBX8 426 aa10.02□□□□□ -0.81
SMARCA1-203ENST00000371123 RALYLQ86SE5 291 aaKnown RBP10.02□□□□□ -0.81
SMARCA1-203ENST00000371123 THEMISQ8N1K5 641 aaPredicted RBP10.02□□□□□ -0.81
SMARCA1-203ENST00000371123 HELBQ8NG08 1087 aaPredicted RBP10.02□□□□□ -0.81
SMARCA1-203ENST00000371123 BORCS6Q96GS4 357 aa10.02□□□□□ -0.81
SMARCA1-203ENST00000371123 HINFPQ9BQA5 517 aa10.02□□□□□ -0.81
SMARCA1-203ENST00000371123 CDHR2Q9BYE9 1310 aa10.02□□□□□ -0.81
SMARCA1-203ENST00000371123 FKBP15Q5T1M5 1219 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 ZNF622Q969S3 477 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 SEC31BQ9NQW1 1179 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 DCCP43146 1447 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 ARHGEF10O15013 1369 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 A0A087WZG4 1122 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 SOWAHDA6NJG2 315 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 FOXN1O15353 648 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 SHOX2O60902 331 aaPredicted RBP10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 PPFIA4O75335 1185 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 SERPINC1P01008 464 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 IVLP07476 585 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 RHOXF2BP0C7M4 288 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 DNA2P51530 1060 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 EFCAB13Q8IY85 973 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 ZNF594Q96JF6 807 aaPredicted RBP10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 RHOXF2Q9BQY4 288 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 KAT14Q9H8E8 782 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 AKAP12Q02952 1782 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 EVA1CP58658 441 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 PROSER3Q2NL68 480 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 AXDND1Q5T1B0 1012 aaPredicted RBP10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 FAM43BQ6ZT52 329 aaPredicted RBP10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 COPS6Q7L5N1 327 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 CEP57L1Q8IYX8 460 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 NKX2-3Q8TAU0 364 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 MYH8P13535 1937 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 DDX58O95786 925 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 DHX8Q14562 1220 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 FAM228AQ86W67 206 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 GSPT2Q8IYD1 628 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 GDAP1L1Q96MZ0 367 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 POLD4Q9HCU8 107 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 JAG2Q9Y219 1238 aa10.01□□□□□ -0.81
SMARCA1-203ENST00000371123 KIF28PB7ZC32 967 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 RNF40O75150 1001 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 SPRED3Q2MJR0 410 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 LEKR1Q6ZMV7 388 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 MPHOSPH8Q99549 860 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 ECM29Q5VYK3 1845 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 RNF225M0QZC1 329 aaPredicted RBP10□□□□□ -0.81
SMARCA1-203ENST00000371123 CLSTN1O94985 981 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 PAX7P23759 505 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 MAP2K2P36507 400 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 CHMP4BP1P59074 171 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 BRD3Q15059 726 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 Q6ZUG5 572 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 GOLGA1Q92805 767 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 GPHNQ9NQX3 736 aaPredicted RBP10□□□□□ -0.81
SMARCA1-203ENST00000371123 PALLDQ8WX93 1383 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 A0A087WUV0 522 aaPredicted RBP10□□□□□ -0.81
SMARCA1-203ENST00000371123 SASH1O94885 1247 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 NOM1Q5C9Z4 860 aaKnown RBP10□□□□□ -0.81
SMARCA1-203ENST00000371123 TTC19Q6DKK2 380 aaPredicted RBP10□□□□□ -0.81
SMARCA1-203ENST00000371123 SRGAP1Q7Z6B7 1085 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 DDX60Q8IY21 1712 aaKnown RBP10□□□□□ -0.81
SMARCA1-203ENST00000371123 MSL3Q8N5Y2 521 aaKnown RBP10□□□□□ -0.81
SMARCA1-203ENST00000371123 IGSF22Q8N9C0 903 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 KAZALD1Q96I82 304 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 ECHDC1Q9NTX5 307 aa10□□□□□ -0.81
SMARCA1-203ENST00000371123 GLRX3O76003 335 aaKnown RBP9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 LTKP29376 864 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 CCT5P48643 541 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 FMR1Q06787 632 aaKnown RBP eCLIP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms