RNA–Protein interactions for RNA: ENST00000341162.8

FCF1-201, Transcript of FCF1, rRNA-processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCF1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-201ENST00000341162 COL1A1P02452 1464 aaPredicted RBP8.29□□□□□ -1.08
FCF1-201ENST00000341162 CMA1P23946 247 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 PLA2G4DQ86XP0 818 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 ANKRD18AQ8IVF6 992 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 NECAB1Q8N987 351 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 AIDAQ96BJ3 306 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 EDC3Q96F86 508 aaKnown RBP8.29□□□□□ -1.08
FCF1-201ENST00000341162 TNMDQ9H2S6 317 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 LY9Q9HBG7 655 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 LEMD3Q9Y2U8 911 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 GOLGA6L4A6NEF3 574 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 FDPSP14324 419 aaKnown RBP8.29□□□□□ -1.08
FCF1-201ENST00000341162 TYRO3Q06418 890 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 SLC27A3Q5K4L6 730 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 SLC9C2Q5TAH2 1124 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 CCDC73Q6ZRK6 1079 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 MTERF4Q7Z6M4 381 aaKnown RBP8.29□□□□□ -1.08
FCF1-201ENST00000341162 IFNL3Q8IZI9 196 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 MRPS27Q92552 414 aaKnown RBP8.29□□□□□ -1.08
FCF1-201ENST00000341162 RNF26Q9BY78 433 aaPredicted RBP8.29□□□□□ -1.08
FCF1-201ENST00000341162 GTPBP4Q9BZE4 634 aaKnown RBP8.29□□□□□ -1.08
FCF1-201ENST00000341162 TCP11L1Q9NUJ3 509 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 ANO10Q9NW15 660 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 MRVI1Q9Y6F6 885 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 TAF6LQ9Y6J9 622 aa8.29□□□□□ -1.08
FCF1-201ENST00000341162 COL4A1P02462 1669 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 COL2A1P02458 1487 aaPredicted RBP8.28□□□□□ -1.08
FCF1-201ENST00000341162 CPA1P15085 419 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 PIBF1Q8WXW3 757 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 PRIMPOLQ96LW4 560 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 IMPACTQ9P2X3 320 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 SUGT1Q9Y2Z0 365 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 PLIN4Q96Q06 1357 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 IKBKBO14920 756 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 FIBPO43427 364 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 SMARCA1P28370 1054 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 PIP4K2AP48426 406 aaPredicted RBP8.28□□□□□ -1.08
FCF1-201ENST00000341162 FGD1P98174 961 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 KIF23Q02241 960 aaPredicted RBP8.28□□□□□ -1.08
FCF1-201ENST00000341162 RASGRF1Q13972 1273 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 SCARF1Q14162 830 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 NTRK3Q16288 839 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 WASHC4Q2M389 1173 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 APOA5Q6Q788 366 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 LINC00301Q8NCQ3 95 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 C8orf76Q96K31 380 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 SH3GLB2Q9NR46 395 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 ATP8A2Q9NTI2 1148 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 CEP131Q9UPN4 1083 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 MYO3BQ8WXR4 1341 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 GSTO1P78417 241 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 FKBP4Q02790 459 aaKnown RBP eCLIP8.28□□□□□ -1.08
FCF1-201ENST00000341162 APOBRQ0VD83 1088 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 KIAA2012Q0VF49 1180 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 ARPP21Q9UBL0 812 aaPredicted RBP8.28□□□□□ -1.08
FCF1-201ENST00000341162 HPSEQ9Y251 543 aa8.28□□□□□ -1.08
FCF1-201ENST00000341162 GOLGA8BA8MQT2 603 aa8.27□□□□□ -1.08
FCF1-201ENST00000341162 CUTAO60888 179 aa8.27□□□□□ -1.08
FCF1-201ENST00000341162 PHKA1P46020 1223 aa8.27□□□□□ -1.08
FCF1-201ENST00000341162 SLC39A14Q15043 492 aa8.27□□□□□ -1.08
FCF1-201ENST00000341162 SYCP1Q15431 976 aa8.27□□□□□ -1.08
FCF1-201ENST00000341162 CAVIN4Q5BKX8 364 aa8.27□□□□□ -1.08
FCF1-201ENST00000341162 FMR1NBQ8N0W7 255 aaPredicted RBP8.27□□□□□ -1.08
FCF1-201ENST00000341162 TRIML1Q8N9V2 468 aa8.27□□□□□ -1.08
FCF1-201ENST00000341162 PGBD1Q96JS3 809 aa8.27□□□□□ -1.08
FCF1-201ENST00000341162 TNS1Q9HBL0 1735 aaKnown RBP8.27□□□□□ -1.08
FCF1-201ENST00000341162 GSG1L2A8MUP6 293 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 DEXIO95424 95 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 TRAPPC10P48553 1259 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 CHRNDQ07001 517 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 SNW1Q13573 536 aaKnown RBP8.27□□□□□ -1.09
FCF1-201ENST00000341162 MYSM1Q5VVJ2 828 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 KLF18A0A0U1RQI7 1052 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 SLC3A2P08195 630 aaKnown RBP8.27□□□□□ -1.09
FCF1-201ENST00000341162 GTF2F1P35269 517 aaKnown RBP eCLIP8.27□□□□□ -1.09
FCF1-201ENST00000341162 METAP2P50579 478 aaKnown RBP eCLIP8.27□□□□□ -1.09
FCF1-201ENST00000341162 GALNT17Q6IS24 598 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 KANK3Q6NY19 840 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 SASS6Q6UVJ0 657 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 SYNE3Q6ZMZ3 975 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 ILDR1Q86SU0 546 aaPredicted RBP8.27□□□□□ -1.09
FCF1-201ENST00000341162 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.27□□□□□ -1.09
FCF1-201ENST00000341162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.27□□□□□ -1.09
FCF1-201ENST00000341162 KLRG2A4D1S0 409 aaPredicted RBP8.27□□□□□ -1.09
FCF1-201ENST00000341162 ZBTB43O43298 467 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 TBC1D10CQ8IV04 446 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 LINC00116Q8NCU8 138 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 MAP7D2Q96T17 732 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 RIOK1Q9BRS2 568 aaKnown RBP8.27□□□□□ -1.09
FCF1-201ENST00000341162 NAPBQ9H115 298 aa8.27□□□□□ -1.09
FCF1-201ENST00000341162 EPB41L4AQ9HCS5 686 aaPredicted RBP8.27□□□□□ -1.09
FCF1-201ENST00000341162 HOOK1Q9UJC3 728 aaKnown RBP8.27□□□□□ -1.09
FCF1-201ENST00000341162 NIP7Q9Y221 180 aaKnown RBP eCLIP8.27□□□□□ -1.09
FCF1-201ENST00000341162 SLC26A4O43511 780 aa8.26□□□□□ -1.09
FCF1-201ENST00000341162 JAK2O60674 1132 aa8.26□□□□□ -1.09
FCF1-201ENST00000341162 PPP4CP60510 307 aa8.26□□□□□ -1.09
FCF1-201ENST00000341162 ESR2Q92731 530 aa8.26□□□□□ -1.09
FCF1-201ENST00000341162 ANKRD31Q8N7Z5 1873 aa8.26□□□□□ -1.09
FCF1-201ENST00000341162 hCG_1984214I3L0E3 225 aa8.26□□□□□ -1.09
FCF1-201ENST00000341162 RILPL1Q5EBL4 403 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms