RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 KRT40Q6A162 431 aa10.81□□□□□ -0.68
TRERF1-201ENST00000340840 STK11IPQ8N1F8 1099 aa10.81□□□□□ -0.68
TRERF1-201ENST00000340840 GOLGA1Q92805 767 aa10.81□□□□□ -0.68
TRERF1-201ENST00000340840 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.81□□□□□ -0.68
TRERF1-201ENST00000340840 XRN1Q8IZH2 1706 aaKnown RBP10.81□□□□□ -0.68
TRERF1-201ENST00000340840 GPAA1O43292 621 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 FCHSD1Q86WN1 690 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 GBP3Q9H0R5 595 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 EFCAB8A8MWE9 144 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 FGAP02671 866 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 DDB1Q16531 1140 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 SLC9C2Q5TAH2 1124 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 LDHAL6AQ6ZMR3 332 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 NUP133Q8WUM0 1156 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 TMX4Q9H1E5 349 aaPredicted RBP10.8□□□□□ -0.68
TRERF1-201ENST00000340840 CTDNEP1O95476 244 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 CCDC175P0C221 793 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 TDO2P48775 406 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 KIF23Q02241 960 aaPredicted RBP10.8□□□□□ -0.68
TRERF1-201ENST00000340840 KLHL10Q6JEL2 608 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 XAGE2Q96GT9 111 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRERF1-201ENST00000340840 TMEM87BQ96K49 555 aa10.8□□□□□ -0.68
TRERF1-201ENST00000340840 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.8□□□□□ -0.68
TRERF1-201ENST00000340840 PALLDQ8WX93 1383 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 RGPD1P0DJD0 1748 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 CHGBP05060 677 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 RXRAP19793 462 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 PPP2R3AQ06190 1150 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 COL9A3Q14050 684 aaPredicted RBP10.79□□□□□ -0.68
TRERF1-201ENST00000340840 PDIA6Q15084 440 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 E4F1Q66K89 784 aaPredicted RBP10.79□□□□□ -0.68
TRERF1-201ENST00000340840 UBAC1Q9BSL1 405 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 AFF2P51816 1311 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 ADD1P35611 737 aaKnown RBP10.79□□□□□ -0.68
TRERF1-201ENST00000340840 CLCN6P51797 869 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 PNOCQ13519 176 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 LRRC24Q50LG9 513 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 MLKLQ8NB16 471 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 ACSBG1Q96GR2 724 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 RFX5P48382 616 aaPredicted RBP10.79□□□□□ -0.68
TRERF1-201ENST00000340840 NOM1Q5C9Z4 860 aaKnown RBP10.79□□□□□ -0.68
TRERF1-201ENST00000340840 CCDC70Q6NSX1 233 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 ARMCX5Q6P1M9 558 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 CPLX3Q8WVH0 158 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 OSBP2Q969R2 916 aa10.79□□□□□ -0.68
TRERF1-201ENST00000340840 GPHNQ9NQX3 736 aaPredicted RBP10.79□□□□□ -0.68
TRERF1-201ENST00000340840 SETD1AO15047 1707 aaKnown RBP10.79□□□□□ -0.68
TRERF1-201ENST00000340840 OVOS2A0A0G2JMS6 1433 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 ERBB3P21860 1342 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 M0R2C6 588 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 PPP6R2O75170 966 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 CIAO1O76071 339 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 MAP3K12Q12852 859 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 CCDC82Q8N4S0 544 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 ZSWIM4Q9H7M6 989 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 PPP2R2CQ9Y2T4 447 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 NFE2L3Q9Y4A8 694 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 ANKRD18BA2A2Z9 1011 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 ATP1A3P13637 1013 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 KARSQ15046 597 aaKnown RBP10.78□□□□□ -0.68
TRERF1-201ENST00000340840 GPR161Q8N6U8 529 aaKnown RBP10.78□□□□□ -0.68
TRERF1-201ENST00000340840 FANCLQ9NW38 375 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 ZMYM6O95789 1325 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 FER1L4A9Z1Z3 1794 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 ZAP70P43403 619 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 SPECC1LQ69YQ0 1117 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 TRERF1Q96PN7 1200 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 CNNM2Q9H8M5 875 aa10.78□□□□□ -0.68
TRERF1-201ENST00000340840 H7C1W4 665 aa10.77□□□□□ -0.68
TRERF1-201ENST00000340840 ATP8B1O43520 1251 aa10.77□□□□□ -0.68
TRERF1-201ENST00000340840 UQCRFS1P1P0C7P4 283 aa10.77□□□□□ -0.68
TRERF1-201ENST00000340840 PNMA6AP0CW24 399 aaPredicted RBP10.77□□□□□ -0.68
TRERF1-201ENST00000340840 BAG6P46379 1132 aa10.77□□□□□ -0.68
TRERF1-201ENST00000340840 NBPF14Q5TI25 921 aa10.77□□□□□ -0.68
TRERF1-201ENST00000340840 PHKBQ93100 1093 aa10.77□□□□□ -0.68
TRERF1-201ENST00000340840 FMN2Q9NZ56 1722 aa10.77□□□□□ -0.68
TRERF1-201ENST00000340840 B4E1Z4 1266 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 TUBB4BP68371 445 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 RTN1Q16799 776 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 KRBA2Q6ZNG9 492 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 VSTM4Q8IW00 320 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 CEP112Q8N8E3 955 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.77□□□□□ -0.69
TRERF1-201ENST00000340840 CTAGE1Q96RT6 745 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 KRT23Q9C075 422 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 L2HGDHQ9H9P8 463 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 FBXO3Q9UK99 471 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 RILPL1Q5EBL4 403 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 MFSD6Q6ZSS7 791 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 ATG3Q9NT62 314 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 PCDHA5Q9Y5H7 936 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 AKR1B15C9JRZ8 316 aaPredicted RBP10.77□□□□□ -0.69
TRERF1-201ENST00000340840 STX10O60499 249 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 LMAN1P49257 510 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 TTLL7Q6ZT98 887 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 AGXT2Q9BYV1 514 aa10.77□□□□□ -0.69
TRERF1-201ENST00000340840 RNF41Q9H4P4 317 aaPredicted RBP10.77□□□□□ -0.69
TRERF1-201ENST00000340840 STARD3NLO95772 234 aa10.76□□□□□ -0.69
TRERF1-201ENST00000340840 A1BGP04217 495 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms