RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CALML3P27482 149 aa14.74□□□□□ -0.05
LIN54-201ENST00000340417 CLIP2Q9UDT6 1046 aa14.74□□□□□ -0.05
LIN54-201ENST00000340417 CCDC129Q6ZRS4 1044 aa14.74□□□□□ -0.05
LIN54-201ENST00000340417 TNPO1Q92973 898 aaKnown RBP14.74□□□□□ -0.05
LIN54-201ENST00000340417 SEMA3EO15041 775 aa14.73□□□□□ -0.05
LIN54-201ENST00000340417 CCNA1P78396 465 aa14.73□□□□□ -0.05
LIN54-201ENST00000340417 NCAPG2Q86XI2 1143 aa14.73□□□□□ -0.05
LIN54-201ENST00000340417 CHURC1Q8WUH1 139 aa14.73□□□□□ -0.05
LIN54-201ENST00000340417 SERPINC1P01008 464 aa14.73□□□□□ -0.05
LIN54-201ENST00000340417 RC3H1Q5TC82 1133 aaKnown RBP14.73□□□□□ -0.05
LIN54-201ENST00000340417 GPR101Q96P66 508 aaPredicted RBP14.73□□□□□ -0.05
LIN54-201ENST00000340417 FRMPD1Q5SYB0 1578 aa14.73□□□□□ -0.05
LIN54-201ENST00000340417 RDXP35241 583 aaKnown RBP14.73□□□□□ -0.05
LIN54-201ENST00000340417 FBXO3Q9UK99 471 aa14.73□□□□□ -0.05
LIN54-201ENST00000340417 NDUFB9Q9Y6M9 179 aa14.73□□□□□ -0.05
LIN54-201ENST00000340417 B4E1Z4 1266 aa14.73□□□□□ -0.05
LIN54-201ENST00000340417 RAD50Q92878 1312 aa14.73□□□□□ -0.05
LIN54-201ENST00000340417 SPATA31D1Q6ZQQ2 1576 aa14.72□□□□□ -0.05
LIN54-201ENST00000340417 SMIM5Q71RC9 77 aa14.72□□□□□ -0.05
LIN54-201ENST00000340417 USH1GQ495M9 461 aa14.72□□□□□ -0.05
LIN54-201ENST00000340417 KBTBD3Q8NAB2 608 aa14.72□□□□□ -0.05
LIN54-201ENST00000340417 PUS3Q9BZE2 481 aaKnown RBP14.72□□□□□ -0.05
LIN54-201ENST00000340417 LRRC27Q9C0I9 530 aa14.72□□□□□ -0.05
LIN54-201ENST00000340417 TRPM1Q7Z4N2 1603 aa14.72□□□□□ -0.05
LIN54-201ENST00000340417 ECE2O60344 883 aa14.72□□□□□ -0.05
LIN54-201ENST00000340417 TCHPQ9BT92 498 aa14.72□□□□□ -0.05
LIN54-201ENST00000340417 RBM25P49756 843 aaKnown RBP14.72□□□□□ -0.05
LIN54-201ENST00000340417 MTFR1LQ9H019 292 aa14.72□□□□□ -0.05
LIN54-201ENST00000340417 DEF6Q9H4E7 631 aa14.72□□□□□ -0.05
LIN54-201ENST00000340417 BSDC1Q9NW68 430 aaPredicted RBP14.72□□□□□ -0.05
LIN54-201ENST00000340417 NEXMIFQ5QGS0 1516 aa14.71□□□□□ -0.05
LIN54-201ENST00000340417 DLC1Q96QB1 1528 aa14.71□□□□□ -0.05
LIN54-201ENST00000340417 USP44Q9H0E7 712 aa14.71□□□□□ -0.05
LIN54-201ENST00000340417 QRICH2Q9H0J4 1663 aa14.71□□□□□ -0.05
LIN54-201ENST00000340417 CTDSPL2Q05D32 466 aa14.71□□□□□ -0.05
LIN54-201ENST00000340417 MYO3BQ8WXR4 1341 aa14.71□□□□□ -0.05
LIN54-201ENST00000340417 TFAP4Q01664 338 aa14.71□□□□□ -0.06
LIN54-201ENST00000340417 ABCB5Q2M3G0 1257 aa14.71□□□□□ -0.06
LIN54-201ENST00000340417 DPP9Q86TI2 863 aa14.71□□□□□ -0.06
LIN54-201ENST00000340417 ANGEL1Q9UNK9 670 aaKnown RBP14.71□□□□□ -0.06
LIN54-201ENST00000340417 MYCP01106 439 aaPredicted RBP14.7□□□□□ -0.06
LIN54-201ENST00000340417 GJB2P29033 226 aa14.7□□□□□ -0.06
LIN54-201ENST00000340417 FAM47CQ5HY64 1035 aa14.7□□□□□ -0.06
LIN54-201ENST00000340417 IBTKQ9P2D0 1353 aaPredicted RBP14.7□□□□□ -0.06
LIN54-201ENST00000340417 MED14O60244 1454 aa14.7□□□□□ -0.06
LIN54-201ENST00000340417 RXRAP19793 462 aa14.7□□□□□ -0.06
LIN54-201ENST00000340417 LINC00116Q8NCU8 138 aa14.7□□□□□ -0.06
LIN54-201ENST00000340417 FLOT1O75955 427 aa14.7□□□□□ -0.06
LIN54-201ENST00000340417 PHKA1P46020 1223 aa14.7□□□□□ -0.06
LIN54-201ENST00000340417 CAVIN1Q6NZI2 390 aaKnown RBP14.7□□□□□ -0.06
LIN54-201ENST00000340417 MST1RQ04912 1400 aa14.7□□□□□ -0.06
LIN54-201ENST00000340417 ICA1Q05084 483 aa14.7□□□□□ -0.06
LIN54-201ENST00000340417 SKAP1Q86WV1 359 aa14.7□□□□□ -0.06
LIN54-201ENST00000340417 USP17L12C9JPN9 530 aa14.69□□□□□ -0.06
LIN54-201ENST00000340417 USP17L21D6R901 530 aa14.69□□□□□ -0.06
LIN54-201ENST00000340417 FNBP4Q8N3X1 1017 aaPredicted RBP14.69□□□□□ -0.06
LIN54-201ENST00000340417 PRKAG2Q9UGJ0 569 aa14.69□□□□□ -0.06
LIN54-201ENST00000340417 CREB3L3Q68CJ9 461 aa14.69□□□□□ -0.06
LIN54-201ENST00000340417 CIAO1O76071 339 aa14.69□□□□□ -0.06
LIN54-201ENST00000340417 CCDC173Q0VFZ6 552 aa14.69□□□□□ -0.06
LIN54-201ENST00000340417 CFAP100Q494V2 611 aa14.69□□□□□ -0.06
LIN54-201ENST00000340417 LUC7LQ9NQ29 371 aaKnown RBP14.69□□□□□ -0.06
LIN54-201ENST00000340417 ATP10DQ9P241 1426 aa14.69□□□□□ -0.06
LIN54-201ENST00000340417 ANKRD35Q8N283 1001 aa14.69□□□□□ -0.06
LIN54-201ENST00000340417 USP14P54578 494 aa14.69□□□□□ -0.06
LIN54-201ENST00000340417 KRT26Q7Z3Y9 468 aa14.69□□□□□ -0.06
LIN54-201ENST00000340417 NAP1L4Q99733 375 aaKnown RBP14.69□□□□□ -0.06
LIN54-201ENST00000340417 TRIM5Q9C035 493 aa14.69□□□□□ -0.06
LIN54-201ENST00000340417 SETBP1Q9Y6X0 1596 aa14.68□□□□□ -0.06
LIN54-201ENST00000340417 M0QZ92 97 aa14.68□□□□□ -0.06
LIN54-201ENST00000340417 FGFR1OPO95684 399 aaKnown RBP14.68□□□□□ -0.06
LIN54-201ENST00000340417 NOM1Q5C9Z4 860 aaKnown RBP14.68□□□□□ -0.06
LIN54-201ENST00000340417 FAM47AQ5JRC9 791 aa14.68□□□□□ -0.06
LIN54-201ENST00000340417 PPFIBP1Q86W92 1011 aa14.68□□□□□ -0.06
LIN54-201ENST00000340417 AZI2Q9H6S1 392 aa14.68□□□□□ -0.06
LIN54-201ENST00000340417 PATL2C9JE40 543 aaKnown RBP14.68□□□□□ -0.06
LIN54-201ENST00000340417 PYM1Q9BRP8 204 aaKnown RBP14.68□□□□□ -0.06
LIN54-201ENST00000340417 CFBP00751 764 aa14.68□□□□□ -0.06
LIN54-201ENST00000340417 KRT2P35908 639 aa14.68□□□□□ -0.06
LIN54-201ENST00000340417 NECAB1Q8N987 351 aa14.68□□□□□ -0.06
LIN54-201ENST00000340417 BACH2Q9BYV9 841 aa14.68□□□□□ -0.06
LIN54-201ENST00000340417 RNF123Q5XPI4 1314 aa14.68□□□□□ -0.06
LIN54-201ENST00000340417 ALAS1P13196 640 aa14.68□□□□□ -0.06
LIN54-201ENST00000340417 CETN1Q12798 172 aa14.68□□□□□ -0.06
LIN54-201ENST00000340417 DHX32Q7L7V1 743 aaKnown RBP14.68□□□□□ -0.06
LIN54-201ENST00000340417 HACL1Q9UJ83 578 aa14.68□□□□□ -0.06
LIN54-201ENST00000340417 BMP15O95972 392 aa14.68□□□□□ -0.06
LIN54-201ENST00000340417 DHX37Q8IY37 1157 aaKnown RBP14.68□□□□□ -0.06
LIN54-201ENST00000340417 FMNL1O95466 1100 aaPredicted RBP14.67□□□□□ -0.06
LIN54-201ENST00000340417 APOBRQ0VD83 1088 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 KLHL10Q6JEL2 608 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 GINS2Q9Y248 185 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 KCTD2Q14681 263 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 MIGA2Q7L4E1 593 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 APBB1IPQ7Z5R6 666 aaPredicted RBP14.67□□□□□ -0.06
LIN54-201ENST00000340417 CNNM3Q8NE01 707 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 GLT8D2Q9H1C3 349 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 DPEP1P16444 411 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 ATP5JP18859 108 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 EIF5P55010 431 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms