RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 MROH5Q6ZUA9 1318 aa19.08■□□□□ 0.65
LITAF-201ENST00000339430 UQCRHLA0A096LP55 91 aa19.08■□□□□ 0.64
LITAF-201ENST00000339430 PDE8BO95263 885 aa19.08■□□□□ 0.64
LITAF-201ENST00000339430 UQCRHP07919 91 aa19.08■□□□□ 0.64
LITAF-201ENST00000339430 FDPSP14324 419 aaKnown RBP19.08■□□□□ 0.64
LITAF-201ENST00000339430 RBM43Q6ZSC3 357 aaKnown RBP19.08■□□□□ 0.64
LITAF-201ENST00000339430 ANKRD18AQ8IVF6 992 aa19.08■□□□□ 0.64
LITAF-201ENST00000339430 PIBF1Q8WXW3 757 aa19.08■□□□□ 0.64
LITAF-201ENST00000339430 CELF1Q92879 486 aaKnown RBP19.08■□□□□ 0.64
LITAF-201ENST00000339430 ST5P78524 1137 aa19.07■□□□□ 0.64
LITAF-201ENST00000339430 MSL1Q68DK7 614 aa19.07■□□□□ 0.64
LITAF-201ENST00000339430 CCAR1Q8IX12 1150 aaKnown RBP19.07■□□□□ 0.64
LITAF-201ENST00000339430 KLF18A0A0U1RQI7 1052 aa19.07■□□□□ 0.64
LITAF-201ENST00000339430 ZNF213O14771 459 aa19.07■□□□□ 0.64
LITAF-201ENST00000339430 NOLC1Q14978 699 aaKnown RBP eCLIP19.07■□□□□ 0.641e-6■□□□□ 11
LITAF-201ENST00000339430 GOLPH3LQ9H4A5 285 aa19.07■□□□□ 0.64
LITAF-201ENST00000339430 RCOR1Q9UKL0 485 aa19.07■□□□□ 0.64
LITAF-201ENST00000339430 DENND2AQ9ULE3 1009 aa19.07■□□□□ 0.64
LITAF-201ENST00000339430 HSP90AA2PQ14568 343 aaPredicted RBP19.06■□□□□ 0.64
LITAF-201ENST00000339430 MB21D2Q8IYB1 491 aaPredicted RBP19.06■□□□□ 0.64
LITAF-201ENST00000339430 GOLGA8BA8MQT2 603 aa19.06■□□□□ 0.64
LITAF-201ENST00000339430 IDH1O75874 414 aaKnown RBP19.06■□□□□ 0.64
LITAF-201ENST00000339430 TERF1P54274 439 aa19.06■□□□□ 0.64
LITAF-201ENST00000339430 ANTXR2P58335 489 aa19.06■□□□□ 0.64
LITAF-201ENST00000339430 SLC9C2Q5TAH2 1124 aa19.06■□□□□ 0.64
LITAF-201ENST00000339430 RALYLQ86SE5 291 aaKnown RBP19.06■□□□□ 0.64
LITAF-201ENST00000339430 KCNF1Q9H3M0 494 aa19.06■□□□□ 0.64
LITAF-201ENST00000339430 RBM10P98175 930 aaKnown RBP19.05■□□□□ 0.64
LITAF-201ENST00000339430 NCOA7Q8NI08 942 aa19.05■□□□□ 0.64
LITAF-201ENST00000339430 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.05■□□□□ 0.64
LITAF-201ENST00000339430 PIH1D3Q9NQM4 214 aaKnown RBP19.05■□□□□ 0.64
LITAF-201ENST00000339430 GJB4Q9NTQ9 266 aa19.05■□□□□ 0.64
LITAF-201ENST00000339430 MMP10P09238 476 aa19.05■□□□□ 0.64
LITAF-201ENST00000339430 ZNF165P49910 485 aa19.05■□□□□ 0.64
LITAF-201ENST00000339430 ZNF396Q96N95 335 aaPredicted RBP19.05■□□□□ 0.64
LITAF-201ENST00000339430 TAOK2Q9UL54 1235 aa19.05■□□□□ 0.64
LITAF-201ENST00000339430 A0A087WWV3 80 aa19.04■□□□□ 0.64
LITAF-201ENST00000339430 ADD2P35612 726 aa19.04■□□□□ 0.64
LITAF-201ENST00000339430 PHKA1P46020 1223 aa19.04■□□□□ 0.64
LITAF-201ENST00000339430 ME1P48163 572 aa19.04■□□□□ 0.64
LITAF-201ENST00000339430 RPS8P62241 208 aaKnown RBP19.04■□□□□ 0.64
LITAF-201ENST00000339430 CHRNDQ07001 517 aa19.04■□□□□ 0.64
LITAF-201ENST00000339430 NKX2-3Q8TAU0 364 aa19.04■□□□□ 0.64
LITAF-201ENST00000339430 BSDC1Q9NW68 430 aaPredicted RBP19.04■□□□□ 0.64
LITAF-201ENST00000339430 SNAP23O00161 211 aa19.04■□□□□ 0.64
LITAF-201ENST00000339430 APPP05067 770 aa19.04■□□□□ 0.64
LITAF-201ENST00000339430 PUM3Q15397 648 aaKnown RBP19.04■□□□□ 0.64
LITAF-201ENST00000339430 PYCARDQ9ULZ3 195 aa19.04■□□□□ 0.64
LITAF-201ENST00000339430 HPS5Q9UPZ3 1129 aa19.04■□□□□ 0.64
LITAF-201ENST00000339430 EVCP57679 992 aa19.03■□□□□ 0.64
LITAF-201ENST00000339430 CCDC125Q86Z20 511 aa19.03■□□□□ 0.64
LITAF-201ENST00000339430 POLR3DP05423 398 aaPredicted RBP19.03■□□□□ 0.64
LITAF-201ENST00000339430 CCDC102BQ68D86 513 aa19.03■□□□□ 0.64
LITAF-201ENST00000339430 CCDC73Q6ZRK6 1079 aa19.03■□□□□ 0.64
LITAF-201ENST00000339430 FBXL16Q8N461 479 aa19.03■□□□□ 0.64
LITAF-201ENST00000339430 PDGFDQ9GZP0 370 aaPredicted RBP19.03■□□□□ 0.64
LITAF-201ENST00000339430 NBPF3Q9H094 633 aa19.03■□□□□ 0.64
LITAF-201ENST00000339430 PARP3Q9Y6F1 533 aa19.03■□□□□ 0.64
LITAF-201ENST00000339430 PTGS1P23219 599 aa19.02■□□□□ 0.64
LITAF-201ENST00000339430 DRC7Q8IY82 874 aa19.02■□□□□ 0.64
LITAF-201ENST00000339430 FSIP1Q8NA03 581 aa19.02■□□□□ 0.64
LITAF-201ENST00000339430 LPIN2Q92539 896 aa19.02■□□□□ 0.64
LITAF-201ENST00000339430 ERCC4Q92889 916 aaPredicted RBP19.02■□□□□ 0.64
LITAF-201ENST00000339430 C8orf76Q96K31 380 aa19.02■□□□□ 0.64
LITAF-201ENST00000339430 TRIM5Q9C035 493 aa19.02■□□□□ 0.64
LITAF-201ENST00000339430 ORC3Q9UBD5 711 aaPredicted RBP19.02■□□□□ 0.64
LITAF-201ENST00000339430 ZNF532Q9HCE3 1301 aa19.02■□□□□ 0.63
LITAF-201ENST00000339430 GOLGA6L6A8MZA4 724 aa19.01■□□□□ 0.63
LITAF-201ENST00000339430 CPLX1O14810 134 aa19.01■□□□□ 0.63
LITAF-201ENST00000339430 FGFR2P21802 821 aa19.01■□□□□ 0.63
LITAF-201ENST00000339430 SNW1Q13573 536 aaKnown RBP19.01■□□□□ 0.63
LITAF-201ENST00000339430 RPGRQ92834 1020 aaKnown RBP19.01■□□□□ 0.63
LITAF-201ENST00000339430 WWC3Q9ULE0 1092 aa19.01■□□□□ 0.63
LITAF-201ENST00000339430 MINPP1Q9UNW1 487 aa19.01■□□□□ 0.63
LITAF-201ENST00000339430 RRP9O43818 475 aaKnown RBP19.01■□□□□ 0.63
LITAF-201ENST00000339430 CRY2Q49AN0 593 aa19.01■□□□□ 0.63
LITAF-201ENST00000339430 ZSCAN25Q6NSZ9 544 aa19.01■□□□□ 0.63
LITAF-201ENST00000339430 C11orf57Q6ZUT1 292 aaPredicted RBP19.01■□□□□ 0.63
LITAF-201ENST00000339430 TBC1D10CQ8IV04 446 aa19.01■□□□□ 0.63
LITAF-201ENST00000339430 RXRAP19793 462 aa19■□□□□ 0.63
LITAF-201ENST00000339430 TDRD7Q8NHU6 1098 aaKnown RBP19■□□□□ 0.63
LITAF-201ENST00000339430 FBXW7Q969H0 707 aa19■□□□□ 0.63
LITAF-201ENST00000339430 NRBP1Q9UHY1 535 aa19■□□□□ 0.63
LITAF-201ENST00000339430 KINO60870 393 aaKnown RBP19■□□□□ 0.63
LITAF-201ENST00000339430 TRDNQ13061 729 aa19■□□□□ 0.63
LITAF-201ENST00000339430 TTF1Q15361 905 aaPredicted RBP19■□□□□ 0.63
LITAF-201ENST00000339430 CYB5R4Q7L1T6 521 aa19■□□□□ 0.63
LITAF-201ENST00000339430 CHMP4CQ96CF2 233 aa19■□□□□ 0.63
LITAF-201ENST00000339430 PCDHA7Q9UN72 937 aa19■□□□□ 0.63
LITAF-201ENST00000339430 CLIC4Q9Y696 253 aa19■□□□□ 0.63
LITAF-201ENST00000339430 DHX16O60231 1041 aaKnown RBP18.99■□□□□ 0.63
LITAF-201ENST00000339430 SLC5A1P13866 664 aa18.99■□□□□ 0.63
LITAF-201ENST00000339430 FAM13BQ9NYF5 915 aa18.99■□□□□ 0.63
LITAF-201ENST00000339430 A0A1B0GVL5 298 aa18.99■□□□□ 0.63
LITAF-201ENST00000339430 WTIPA6NIX2 430 aaPredicted RBP18.99■□□□□ 0.63
LITAF-201ENST00000339430 PDE6AP16499 860 aa18.99■□□□□ 0.63
LITAF-201ENST00000339430 ZNF75DP51815 510 aa18.99■□□□□ 0.63
LITAF-201ENST00000339430 FAM160A1Q05DH4 1040 aa18.99■□□□□ 0.63
LITAF-201ENST00000339430 GRAPQ13588 217 aa18.99■□□□□ 0.63
LITAF-201ENST00000339430 ATL3Q6DD88 541 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms