RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 ITGBL1O95965 494 aaPredicted RBP20.28■□□□□ 0.84
SFN-201ENST00000339276 LDHCP07864 332 aa20.28■□□□□ 0.84
SFN-201ENST00000339276 PDE6AP16499 860 aa20.28■□□□□ 0.84
SFN-201ENST00000339276 CACNB3P54284 484 aa20.28■□□□□ 0.84
SFN-201ENST00000339276 SLC9C2Q5TAH2 1124 aa20.28■□□□□ 0.84
SFN-201ENST00000339276 CDC42EP5Q6NZY7 148 aa20.28■□□□□ 0.84
SFN-201ENST00000339276 USP48Q86UV5 1035 aa20.28■□□□□ 0.84
SFN-201ENST00000339276 GPR75-ASB3A0A0A6YYF3 556 aa20.27■□□□□ 0.84
SFN-201ENST00000339276 TRAF5O00463 557 aa20.27■□□□□ 0.84
SFN-201ENST00000339276 CHGBP05060 677 aa20.27■□□□□ 0.84
SFN-201ENST00000339276 CYP7A1P22680 504 aa20.27■□□□□ 0.84
SFN-201ENST00000339276 FMR1Q06787 632 aaKnown RBP eCLIP20.27■□□□□ 0.84
SFN-201ENST00000339276 CDC37L1Q7L3B6 337 aa20.27■□□□□ 0.84
SFN-201ENST00000339276 SKAP1Q86WV1 359 aa20.27■□□□□ 0.84
SFN-201ENST00000339276 APOBEC3FQ8IUX4 373 aaKnown RBP20.27■□□□□ 0.84
SFN-201ENST00000339276 SULF1Q8IWU6 871 aa20.27■□□□□ 0.84
SFN-201ENST00000339276 KBTBD3Q8NAB2 608 aa20.27■□□□□ 0.84
SFN-201ENST00000339276 SLFNL1Q499Z3 407 aa20.27■□□□□ 0.83
SFN-201ENST00000339276 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.27■□□□□ 0.83
SFN-201ENST00000339276 USP40Q9NVE5 1235 aa20.27■□□□□ 0.83
SFN-201ENST00000339276 ZNF532Q9HCE3 1301 aa20.26■□□□□ 0.83
SFN-201ENST00000339276 TCRBV5S4A2TA0A5A2 114 aa20.26■□□□□ 0.83
SFN-201ENST00000339276 TCP10L2B9ZVM9 353 aa20.26■□□□□ 0.83
SFN-201ENST00000339276 ADD2P35612 726 aa20.26■□□□□ 0.83
SFN-201ENST00000339276 AATFQ9NY61 560 aaKnown RBP eCLIP20.26■□□□□ 0.83
SFN-201ENST00000339276 PASKQ96RG2 1323 aa20.25■□□□□ 0.83
SFN-201ENST00000339276 RHBDL3P58872 404 aa20.25■□□□□ 0.83
SFN-201ENST00000339276 MIGA1Q8NAN2 632 aa20.25■□□□□ 0.83
SFN-201ENST00000339276 TMOD2Q9NZR1 351 aa20.25■□□□□ 0.83
SFN-201ENST00000339276 CNTNAP1P78357 1384 aa20.24■□□□□ 0.83
SFN-201ENST00000339276 RFX7Q2KHR2 1363 aa20.24■□□□□ 0.83
SFN-201ENST00000339276 C1QTNF8P60827 252 aa20.24■□□□□ 0.83
SFN-201ENST00000339276 DYNLL1P63167 89 aaKnown RBP20.24■□□□□ 0.83
SFN-201ENST00000339276 NFIAQ12857 509 aa20.24■□□□□ 0.83
SFN-201ENST00000339276 PRAMEF18Q5VWM3 479 aa20.24■□□□□ 0.83
SFN-201ENST00000339276 TMED8Q6PL24 325 aaPredicted RBP20.24■□□□□ 0.83
SFN-201ENST00000339276 EVI5LQ96CN4 794 aa20.24■□□□□ 0.83
SFN-201ENST00000339276 NOL10Q9BSC4 688 aaKnown RBP20.24■□□□□ 0.83
SFN-201ENST00000339276 FSD1Q9BTV5 496 aa20.24■□□□□ 0.83
SFN-201ENST00000339276 DEFB129Q9H1M3 183 aa20.24■□□□□ 0.83
SFN-201ENST00000339276 CDK5RAP2Q96SN8 1893 aa20.23■□□□□ 0.83
SFN-201ENST00000339276 AK9Q5TCS8 1911 aa20.23■□□□□ 0.83
SFN-201ENST00000339276 TRIM6-TRIM34B2RNG4 842 aa20.23■□□□□ 0.83
SFN-201ENST00000339276 BAG3O95817 575 aa20.23■□□□□ 0.83
SFN-201ENST00000339276 PPP4CP60510 307 aa20.23■□□□□ 0.83
SFN-201ENST00000339276 TNFAIP1Q13829 316 aa20.23■□□□□ 0.83
SFN-201ENST00000339276 TTC22Q5TAA0 569 aa20.23■□□□□ 0.83
SFN-201ENST00000339276 ZSCAN25Q6NSZ9 544 aa20.23■□□□□ 0.83
SFN-201ENST00000339276 SH3RF3Q8TEJ3 882 aaPredicted RBP20.23■□□□□ 0.83
SFN-201ENST00000339276 CDCA5Q96FF9 252 aa20.23■□□□□ 0.83
SFN-201ENST00000339276 TRPM7Q96QT4 1865 aa20.23■□□□□ 0.83
SFN-201ENST00000339276 WDHD1O75717 1129 aaPredicted RBP20.22■□□□□ 0.83
SFN-201ENST00000339276 GSPT1P15170 499 aaKnown RBP20.22■□□□□ 0.83
SFN-201ENST00000339276 RASA3Q14644 834 aa20.22■□□□□ 0.83
SFN-201ENST00000339276 UBE3CQ15386 1083 aa20.22■□□□□ 0.83
SFN-201ENST00000339276 RILPL2Q969X0 211 aa20.22■□□□□ 0.83
SFN-201ENST00000339276 RIOK1Q9BRS2 568 aaKnown RBP20.22■□□□□ 0.83
SFN-201ENST00000339276 FOCADQ5VW36 1801 aa20.21■□□□□ 0.83
SFN-201ENST00000339276 FKBP1CQ5VVH2 108 aa20.21■□□□□ 0.83
SFN-201ENST00000339276 TEX11Q8IYF3 940 aa20.21■□□□□ 0.83
SFN-201ENST00000339276 IDI2Q9BXS1 227 aa20.21■□□□□ 0.83
SFN-201ENST00000339276 TMEM39BQ9GZU3 492 aa20.21■□□□□ 0.83
SFN-201ENST00000339276 ZNF408Q9H9D4 720 aa20.21■□□□□ 0.83
SFN-201ENST00000339276 DDX4Q9NQI0 724 aaKnown RBP20.21■□□□□ 0.83
SFN-201ENST00000339276 FAM198AQ9UFP1 575 aa20.21■□□□□ 0.83
SFN-201ENST00000339276 MAGEB6P1A0A0J9YX57 407 aa20.2■□□□□ 0.82
SFN-201ENST00000339276 RNF113AO15541 343 aaKnown RBP20.2■□□□□ 0.82
SFN-201ENST00000339276 PLCG2P16885 1265 aa20.2■□□□□ 0.82
SFN-201ENST00000339276 TNNI2P48788 182 aa20.2■□□□□ 0.82
SFN-201ENST00000339276 RGS3P49796 1198 aa20.2■□□□□ 0.82
SFN-201ENST00000339276 TCP10Q12799 353 aa20.2■□□□□ 0.82
SFN-201ENST00000339276 PICALMQ13492 652 aa20.2■□□□□ 0.82
SFN-201ENST00000339276 CDAN1Q8IWY9 1227 aa20.2■□□□□ 0.82
SFN-201ENST00000339276 PPP2R3BQ9Y5P8 575 aa20.2■□□□□ 0.82
SFN-201ENST00000339276 ZFYP08048 801 aaPredicted RBP20.19■□□□□ 0.82
SFN-201ENST00000339276 FAM83AQ86UY5 434 aa20.19■□□□□ 0.82
SFN-201ENST00000339276 LCORLQ8N3X6 602 aa20.19■□□□□ 0.82
SFN-201ENST00000339276 PUS7LQ9H0K6 701 aaKnown RBP20.19■□□□□ 0.82
SFN-201ENST00000339276 SSC5DA1L4H1 1573 aa20.18■□□□□ 0.82
SFN-201ENST00000339276 MBD4O95243 580 aa20.18■□□□□ 0.82
SFN-201ENST00000339276 CELF2O95319 508 aaKnown RBP20.18■□□□□ 0.82
SFN-201ENST00000339276 LRRFIP1Q32MZ4 808 aaKnown RBP20.18■□□□□ 0.82
SFN-201ENST00000339276 CST9Q5W186 159 aa20.18■□□□□ 0.82
SFN-201ENST00000339276 ZFPM1Q8IX07 1006 aa20.18■□□□□ 0.82
SFN-201ENST00000339276 APPBP2Q92624 585 aa20.18■□□□□ 0.82
SFN-201ENST00000339276 TEPSINQ96N21 525 aa20.18■□□□□ 0.82
SFN-201ENST00000339276 ARMT1Q9H993 441 aa20.18■□□□□ 0.82
SFN-201ENST00000339276 ENTPD3O75355 529 aa20.17■□□□□ 0.82
SFN-201ENST00000339276 APLP1P51693 650 aa20.17■□□□□ 0.82
SFN-201ENST00000339276 NBPF12Q5TAG4 269 aaPredicted RBP20.17■□□□□ 0.82
SFN-201ENST00000339276 CERS3Q8IU89 383 aa20.17■□□□□ 0.82
SFN-201ENST00000339276 TGFBRAP1Q8WUH2 860 aa20.17■□□□□ 0.82
SFN-201ENST00000339276 FAM151AQ8WW52 585 aa20.17■□□□□ 0.82
SFN-201ENST00000339276 OSBP2Q969R2 916 aa20.17■□□□□ 0.82
SFN-201ENST00000339276 RPAP1Q9BWH6 1393 aaPredicted RBP20.17■□□□□ 0.82
SFN-201ENST00000339276 M0R2C6 588 aa20.16■□□□□ 0.82
SFN-201ENST00000339276 SDSP20132 328 aa20.16■□□□□ 0.82
SFN-201ENST00000339276 MAPKAPK5Q8IW41 473 aa20.16■□□□□ 0.82
SFN-201ENST00000339276 SEC62Q99442 399 aaKnown RBP20.16■□□□□ 0.82
SFN-201ENST00000339276 FLT1P17948 1338 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms