RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 RNF113AO15541 343 aaKnown RBP18.57■□□□□ 0.56
SEC13-201ENST00000337354 PLCG2P16885 1265 aa18.57■□□□□ 0.56
SEC13-201ENST00000337354 BTDP43251 543 aa18.57■□□□□ 0.56
SEC13-201ENST00000337354 SPDYE2Q495Y8 402 aa18.57■□□□□ 0.56
SEC13-201ENST00000337354 ANGEL2Q5VTE6 544 aaKnown RBP18.57■□□□□ 0.56
SEC13-201ENST00000337354 FKBP1CQ5VVH2 108 aa18.57■□□□□ 0.56
SEC13-201ENST00000337354 CDC37L1Q7L3B6 337 aa18.57■□□□□ 0.56
SEC13-201ENST00000337354 RILPL2Q969X0 211 aa18.57■□□□□ 0.56
SEC13-201ENST00000337354 TDRD3Q9H7E2 651 aaKnown RBP18.57■□□□□ 0.56
SEC13-201ENST00000337354 USP40Q9NVE5 1235 aa18.57■□□□□ 0.56
SEC13-201ENST00000337354 TMOD2Q9NZR1 351 aa18.57■□□□□ 0.56
SEC13-201ENST00000337354 ZNF70Q9UC06 446 aaPredicted RBP18.57■□□□□ 0.56
SEC13-201ENST00000337354 TRPM7Q96QT4 1865 aa18.57■□□□□ 0.56
SEC13-201ENST00000337354 ZNF532Q9HCE3 1301 aa18.57■□□□□ 0.56
SEC13-201ENST00000337354 TCRBV5S4A2TA0A5A2 114 aa18.56■□□□□ 0.56
SEC13-201ENST00000337354 APLP1P51693 650 aa18.56■□□□□ 0.56
SEC13-201ENST00000337354 MAP1SQ66K74 1059 aaPredicted RBP18.56■□□□□ 0.56
SEC13-201ENST00000337354 APOBEC3FQ8IUX4 373 aaKnown RBP18.56■□□□□ 0.56
SEC13-201ENST00000337354 SULF1Q8IWU6 871 aa18.56■□□□□ 0.56
SEC13-201ENST00000337354 GGA3Q9NZ52 723 aa18.56■□□□□ 0.56
SEC13-201ENST00000337354 TNFAIP1Q13829 316 aa18.55■□□□□ 0.56
SEC13-201ENST00000337354 CDC42EP5Q6NZY7 148 aa18.55■□□□□ 0.56
SEC13-201ENST00000337354 ADGRA1Q86SQ6 560 aa18.55■□□□□ 0.56
SEC13-201ENST00000337354 AKAP11Q9UKA4 1901 aa18.55■□□□□ 0.56
SEC13-201ENST00000337354 GSPT1P15170 499 aaKnown RBP18.55■□□□□ 0.56
SEC13-201ENST00000337354 TNNI2P48788 182 aa18.55■□□□□ 0.56
SEC13-201ENST00000337354 RGS3P49796 1198 aa18.55■□□□□ 0.56
SEC13-201ENST00000337354 APPBP2Q92624 585 aa18.55■□□□□ 0.56
SEC13-201ENST00000337354 AATFQ9NY61 560 aaKnown RBP eCLIP18.55■□□□□ 0.56
SEC13-201ENST00000337354 GTF3C3Q9Y5Q9 886 aa18.55■□□□□ 0.56
SEC13-201ENST00000337354 ASTN2O75129 1339 aaPredicted RBP18.54■□□□□ 0.56
SEC13-201ENST00000337354 RFX7Q2KHR2 1363 aa18.54■□□□□ 0.56
SEC13-201ENST00000337354 CLRN2A0PK11 232 aa18.54■□□□□ 0.56
SEC13-201ENST00000337354 HIP1O00291 1037 aa18.54■□□□□ 0.56
SEC13-201ENST00000337354 NPM3O75607 178 aaKnown RBP18.54■□□□□ 0.56
SEC13-201ENST00000337354 SDSP20132 328 aa18.54■□□□□ 0.56
SEC13-201ENST00000337354 RHBDL3P58872 404 aa18.54■□□□□ 0.56
SEC13-201ENST00000337354 KRT26Q7Z3Y9 468 aa18.54■□□□□ 0.56
SEC13-201ENST00000337354 IDI2Q9BXS1 227 aa18.54■□□□□ 0.56
SEC13-201ENST00000337354 VEZTQ9HBM0 779 aa18.54■□□□□ 0.56
SEC13-201ENST00000337354 PPP2R3BQ9Y5P8 575 aa18.54■□□□□ 0.56
SEC13-201ENST00000337354 MAGEB6P1A0A0J9YX57 407 aa18.53■□□□□ 0.56
SEC13-201ENST00000337354 HTRA3P83110 453 aa18.53■□□□□ 0.56
SEC13-201ENST00000337354 BMP2KLQ5H9B9 411 aa18.53■□□□□ 0.56
SEC13-201ENST00000337354 FAM83AQ86UY5 434 aa18.53■□□□□ 0.56
SEC13-201ENST00000337354 RIOK1Q9BRS2 568 aaKnown RBP18.53■□□□□ 0.56
SEC13-201ENST00000337354 POLR2AP24928 1970 aaKnown RBP18.52■□□□□ 0.56
SEC13-201ENST00000337354 MIGA1Q8NAN2 632 aa18.52■□□□□ 0.55
SEC13-201ENST00000337354 DEFB129Q9H1M3 183 aa18.52■□□□□ 0.55
SEC13-201ENST00000337354 ECM29Q5VYK3 1845 aa18.51■□□□□ 0.55
SEC13-201ENST00000337354 ENTPD3O75355 529 aa18.51■□□□□ 0.55
SEC13-201ENST00000337354 WDHD1O75717 1129 aaPredicted RBP18.51■□□□□ 0.55
SEC13-201ENST00000337354 ITGBL1O95965 494 aaPredicted RBP18.51■□□□□ 0.55
SEC13-201ENST00000337354 RASA3Q14644 834 aa18.51■□□□□ 0.55
SEC13-201ENST00000337354 ZMYM1Q5SVZ6 1142 aa18.51■□□□□ 0.55
SEC13-201ENST00000337354 USP48Q86UV5 1035 aa18.51■□□□□ 0.55
SEC13-201ENST00000337354 SKAP1Q86WV1 359 aa18.51■□□□□ 0.55
SEC13-201ENST00000337354 TEX11Q8IYF3 940 aa18.51■□□□□ 0.55
SEC13-201ENST00000337354 SH3RF3Q8TEJ3 882 aaPredicted RBP18.51■□□□□ 0.55
SEC13-201ENST00000337354 FAM151AQ8WW52 585 aa18.51■□□□□ 0.55
SEC13-201ENST00000337354 AIDAQ96BJ3 306 aa18.51■□□□□ 0.55
SEC13-201ENST00000337354 PUS7LQ9H0K6 701 aaKnown RBP18.51■□□□□ 0.55
SEC13-201ENST00000337354 HELLSQ9NRZ9 838 aa18.51■□□□□ 0.55
SEC13-201ENST00000337354 TCP10L2B9ZVM9 353 aa18.5■□□□□ 0.55
SEC13-201ENST00000337354 DYNLL1P63167 89 aaKnown RBP18.5■□□□□ 0.55
SEC13-201ENST00000337354 OSBP2Q969R2 916 aa18.5■□□□□ 0.55
SEC13-201ENST00000337354 GLIS2Q9BZE0 524 aaPredicted RBP18.5■□□□□ 0.55
SEC13-201ENST00000337354 CRNKL1Q9BZJ0 848 aaKnown RBP18.5■□□□□ 0.55
SEC13-201ENST00000337354 PASKQ96RG2 1323 aa18.5■□□□□ 0.55
SEC13-201ENST00000337354 CHGBP05060 677 aa18.49■□□□□ 0.55
SEC13-201ENST00000337354 CACNB3P54284 484 aa18.49■□□□□ 0.55
SEC13-201ENST00000337354 SLFNL1Q499Z3 407 aa18.49■□□□□ 0.55
SEC13-201ENST00000337354 MBD4O95243 580 aa18.48■□□□□ 0.55
SEC13-201ENST00000337354 GNAT2P19087 354 aa18.48■□□□□ 0.55
SEC13-201ENST00000337354 NFIAQ12857 509 aa18.48■□□□□ 0.55
SEC13-201ENST00000337354 SUPT20HL1Q3ZLR7 823 aa18.48■□□□□ 0.55
SEC13-201ENST00000337354 MCMDC2Q4G0Z9 681 aa18.48■□□□□ 0.55
SEC13-201ENST00000337354 STRBPQ96SI9 672 aaKnown RBP18.48■□□□□ 0.55
SEC13-201ENST00000337354 DIAPH3Q9NSV4 1193 aa18.48■□□□□ 0.55
SEC13-201ENST00000337354 FAM198AQ9UFP1 575 aa18.48■□□□□ 0.55
SEC13-201ENST00000337354 ADM5C9JUS6 153 aa18.47■□□□□ 0.55
SEC13-201ENST00000337354 TRAF5O00463 557 aa18.47■□□□□ 0.55
SEC13-201ENST00000337354 LCORLQ8N3X6 602 aa18.47■□□□□ 0.55
SEC13-201ENST00000337354 TGFBRAP1Q8WUH2 860 aa18.47■□□□□ 0.55
SEC13-201ENST00000337354 HOOK2Q96ED9 719 aa18.47■□□□□ 0.55
SEC13-201ENST00000337354 ARMT1Q9H993 441 aa18.47■□□□□ 0.55
SEC13-201ENST00000337354 ATP8A2Q9NTI2 1148 aa18.47■□□□□ 0.55
SEC13-201ENST00000337354 GPAA1O43292 621 aa18.46■□□□□ 0.55
SEC13-201ENST00000337354 USP5P45974 858 aa18.46■□□□□ 0.55
SEC13-201ENST00000337354 MFAP1P55081 439 aaKnown RBP18.46■□□□□ 0.55
SEC13-201ENST00000337354 TCP10Q12799 353 aa18.46■□□□□ 0.55
SEC13-201ENST00000337354 PICALMQ13492 652 aa18.46■□□□□ 0.55
SEC13-201ENST00000337354 RUFY2Q8WXA3 655 aa18.46■□□□□ 0.55
SEC13-201ENST00000337354 DHX36Q9H2U1 1008 aaKnown RBP18.46■□□□□ 0.55
SEC13-201ENST00000337354 CNTNAP1P78357 1384 aa18.46■□□□□ 0.55
SEC13-201ENST00000337354 NF2P35240 595 aa18.45■□□□□ 0.54
SEC13-201ENST00000337354 FMR1Q06787 632 aaKnown RBP eCLIP18.45■□□□□ 0.54
SEC13-201ENST00000337354 NMIQ13287 307 aaPredicted RBP18.45■□□□□ 0.54
SEC13-201ENST00000337354 GIMAP6Q6P9H5 292 aa18.45■□□□□ 0.54
SEC13-201ENST00000337354 CDCA5Q96FF9 252 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms