RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 GLIS3Q8NEA6 775 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 YIPF2Q9BWQ6 316 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 BCO2Q9BYV7 579 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 KCNF1Q9H3M0 494 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 GPN3Q9UHW5 284 aaPredicted RBP2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 TIAF1O95411 115 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 IGLV1-40P01703 118 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 Q8N3U1 123 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 TRIM56Q9BRZ2 755 aaKnown RBP2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 SRCIN1Q9C0H9 1055 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 C7orf69Q9H7B7 122 aa2.95□□□□□ -1.94
CCDC144A-201ENST00000328495 DLGAP3O95886 979 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 RXRBP28702 533 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 USP11P51784 963 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 PDE3AQ14432 1141 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 BEND4Q6ZU67 534 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 SND1Q7KZF4 910 aaKnown RBP eCLIP2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 FAM83CQ9BQN1 747 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 DBNDD2Q9BQY9 259 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 RAD18Q9NS91 495 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 RNF112Q9ULX5 631 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 GIPC1O14908 333 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 ADH5P11766 374 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 MAP4P27816 1152 aaKnown RBP2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 GSTT1P30711 240 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 SOX4Q06945 474 aaPredicted RBP2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 NFIAQ12857 509 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 LRP8Q14114 963 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 RNF43Q68DV7 783 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 NXPE4Q6UWF7 544 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 TRIM42Q8IWZ5 723 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 SPG7Q9UQ90 795 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 MRC2Q9UBG0 1479 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 STRCQ7RTU9 1775 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 HMX2A2RU54 273 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 FGD1P98174 961 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 SGO2Q562F6 1265 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 TMEM39AQ9NV64 488 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 AP4E1Q9UPM8 1137 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 AKAP2Q9Y2D5 859 aa2.94□□□□□ -1.94
CCDC144A-201ENST00000328495 CTSBP07858 339 aa2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 RGS19P49795 217 aa2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 ZNF157P51786 506 aaPredicted RBP2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 FAAP100Q0VG06 881 aa2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 AKAP4Q5JQC9 854 aa2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 ARTNQ5T4W7 220 aa2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 GIMAP7Q8NHV1 300 aa2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 ZFP64Q9NPA5 681 aa2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 GLI2P10070 1586 aa2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 SETBP1Q9Y6X0 1596 aa2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 P4HBP07237 508 aaKnown RBP2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 DRD2P14416 443 aa2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 PAOXQ6QHF9 649 aa2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 C2CD4AQ8NCU7 369 aaPredicted RBP2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 PPM1HQ9ULR3 514 aa2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 SYNGAP1Q96PV0 1343 aa2.93□□□□□ -1.94
CCDC144A-201ENST00000328495 FAM95CA0A1B0GW59 222 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 LDHBP07195 334 aaKnown RBP2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 GSTP1P09211 210 aaKnown RBP2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 COL19A1Q14993 1142 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 FRMD6Q96NE9 622 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 CEP44Q9C0F1 390 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 KRT82Q9NSB4 513 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 PREX1Q8TCU6 1659 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 AOC2O75106 756 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 ECEL1O95672 775 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 GRIK1P39086 918 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 DYMQ7RTS9 669 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 SULF2Q8IWU5 870 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 WDR18Q9BV38 432 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 EMILIN2Q9BXX0 1053 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 SAMM50Q9Y512 469 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 ACTL7BQ9Y614 415 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 SLFN14P0C7P3 912 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 RAB6AP20340 208 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 MAP7Q14244 749 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 NFKBIBQ15653 356 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 NBPF11Q86T75 865 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 C3orf58Q8NDZ4 430 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 FBLIM1Q8WUP2 373 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 SETDB2Q96T68 719 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 C12orf49Q9H741 205 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 FAM8A1Q9UBU6 413 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 WWC3Q9ULE0 1092 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 CHD4Q14839 1912 aa2.92□□□□□ -1.94
CCDC144A-201ENST00000328495 COBLO75128 1261 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 PRPF40AO75400 957 aaKnown RBP2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 NME2P22392 152 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 CDPF1Q6NVV7 123 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 ZDHHC13Q8IUH4 622 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 SHKBP1Q8TBC3 707 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 EZH1Q92800 747 aaPredicted RBP2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 KCNB2Q92953 911 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 ZC3H12CQ9C0D7 883 aaKnown RBP2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 CCDC86Q9H6F5 360 aaKnown RBP2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 PCMTD2Q9NV79 361 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 CHD1O14646 1710 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 ANKRD33BA6NCL7 494 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 LIG1P18858 919 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms