RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 SLC4A9Q96Q91 983 aa22.73■■□□□ 1.23
AP3S1-201ENST00000316788 PIH1D3Q9NQM4 214 aaKnown RBP22.73■■□□□ 1.23
AP3S1-201ENST00000316788 BTAF1O14981 1849 aa22.73■■□□□ 1.23
AP3S1-201ENST00000316788 TCRBV5S4A2TA0A5A2 114 aa22.72■■□□□ 1.23
AP3S1-201ENST00000316788 SPTLC2O15270 562 aa22.72■■□□□ 1.23
AP3S1-201ENST00000316788 CCDC102BQ68D86 513 aa22.72■■□□□ 1.23
AP3S1-201ENST00000316788 CPLX2Q6PUV4 134 aaKnown RBP22.72■■□□□ 1.23
AP3S1-201ENST00000316788 DHX40Q8IX18 779 aaKnown RBP22.72■■□□□ 1.23
AP3S1-201ENST00000316788 PDE6AP16499 860 aa22.71■■□□□ 1.23
AP3S1-201ENST00000316788 RBM10P98175 930 aaKnown RBP22.71■■□□□ 1.23
AP3S1-201ENST00000316788 SF3A1Q15459 793 aaKnown RBP22.71■■□□□ 1.23
AP3S1-201ENST00000316788 SYNE4Q8N205 404 aa22.71■■□□□ 1.23
AP3S1-201ENST00000316788 ZBTB1Q9Y2K1 713 aa22.71■■□□□ 1.23
AP3S1-201ENST00000316788 NID2Q14112 1375 aa22.71■■□□□ 1.23
AP3S1-201ENST00000316788 BECN2A8MW95 431 aa22.71■■□□□ 1.23
AP3S1-201ENST00000316788 SYNE3Q6ZMZ3 975 aa22.71■■□□□ 1.23
AP3S1-201ENST00000316788 SGMS1Q86VZ5 419 aa22.71■■□□□ 1.23
AP3S1-201ENST00000316788 TBC1D10CQ8IV04 446 aa22.71■■□□□ 1.23
AP3S1-201ENST00000316788 ZNF532Q9HCE3 1301 aa22.7■■□□□ 1.22
AP3S1-201ENST00000316788 TIAM2Q8IVF5 1701 aa22.7■■□□□ 1.22
AP3S1-201ENST00000316788 CMA1P23946 247 aa22.7■■□□□ 1.22
AP3S1-201ENST00000316788 ANO1Q5XXA6 986 aa22.7■■□□□ 1.22
AP3S1-201ENST00000316788 TIGD1Q96MW7 591 aa22.7■■□□□ 1.22
AP3S1-201ENST00000316788 CLIC4Q9Y696 253 aa22.7■■□□□ 1.22
AP3S1-201ENST00000316788 STK36Q9NRP7 1315 aa22.7■■□□□ 1.22
AP3S1-201ENST00000316788 RTL9Q8NET4 1388 aa22.69■■□□□ 1.22
AP3S1-201ENST00000316788 DZIP3Q86Y13 1208 aaKnown RBP22.69■■□□□ 1.22
AP3S1-201ENST00000316788 STRBPQ96SI9 672 aaKnown RBP22.69■■□□□ 1.22
AP3S1-201ENST00000316788 KIAA1468Q9P260 1216 aa22.69■■□□□ 1.22
AP3S1-201ENST00000316788 SLC5A1P13866 664 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 LIFRP42702 1097 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 PHKA1P46020 1223 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 METAP2P50579 478 aaKnown RBP eCLIP22.68■■□□□ 1.22
AP3S1-201ENST00000316788 KCNQ4P56696 695 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 DHX8Q14562 1220 aaKnown RBP22.68■■□□□ 1.22
AP3S1-201ENST00000316788 APOA5Q6Q788 366 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 SDF4Q9BRK5 362 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 MTA3Q9BTC8 594 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 NRBP1Q9UHY1 535 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 NEDD4P46934 1319 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 UBN2Q6ZU65 1347 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 FAM237AA0A1B0GTK4 181 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 PPP6R2O75170 966 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 APBA3O96018 575 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 NDUFA8P51970 172 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 SLC39A14Q15043 492 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 CYB5R4Q7L1T6 521 aa22.68■■□□□ 1.22
AP3S1-201ENST00000316788 NUP98P52948 1817 aa22.67■■□□□ 1.22
AP3S1-201ENST00000316788 TNS1Q9HBL0 1735 aaKnown RBP22.67■■□□□ 1.22
AP3S1-201ENST00000316788 CICQ96RK0 1608 aaPredicted RBP22.67■■□□□ 1.22
AP3S1-201ENST00000316788 IDH1O75874 414 aaKnown RBP22.67■■□□□ 1.22
AP3S1-201ENST00000316788 AXDND1Q5T1B0 1012 aaPredicted RBP22.67■■□□□ 1.22
AP3S1-201ENST00000316788 OTUD7BQ6GQQ9 843 aa22.67■■□□□ 1.22
AP3S1-201ENST00000316788 CACTINQ8WUQ7 758 aaKnown RBP22.67■■□□□ 1.22
AP3S1-201ENST00000316788 CNNM2Q9H8M5 875 aa22.67■■□□□ 1.22
AP3S1-201ENST00000316788 KCND1Q9NSA2 647 aa22.67■■□□□ 1.22
AP3S1-201ENST00000316788 DOCK2Q92608 1830 aa22.66■■□□□ 1.22
AP3S1-201ENST00000316788 KIF28PB7ZC32 967 aa22.66■■□□□ 1.22
AP3S1-201ENST00000316788 PATL2C9JE40 543 aaKnown RBP22.66■■□□□ 1.22
AP3S1-201ENST00000316788 JMYQ8N9B5 988 aa22.66■■□□□ 1.22
AP3S1-201ENST00000316788 IGDCC4Q8TDY8 1250 aa22.66■■□□□ 1.22
AP3S1-201ENST00000316788 AIDAQ96BJ3 306 aa22.66■■□□□ 1.22
AP3S1-201ENST00000316788 ALG1Q9BT22 464 aa22.66■■□□□ 1.22
AP3S1-201ENST00000316788 RREB1Q92766 1687 aa22.66■■□□□ 1.22
AP3S1-201ENST00000316788 A0A1B0GVL5 298 aa22.65■■□□□ 1.22
AP3S1-201ENST00000316788 POLR3DP05423 398 aaPredicted RBP22.65■■□□□ 1.22
AP3S1-201ENST00000316788 MAP3K12Q12852 859 aa22.65■■□□□ 1.22
AP3S1-201ENST00000316788 LRMPQ12912 555 aa22.65■■□□□ 1.22
AP3S1-201ENST00000316788 CCDC144BQ3MJ40 725 aa22.65■■□□□ 1.22
AP3S1-201ENST00000316788 LRRC8AQ8IWT6 810 aa22.65■■□□□ 1.22
AP3S1-201ENST00000316788 CCDC144CPQ8IYA2 1237 aa22.65■■□□□ 1.22
AP3S1-201ENST00000316788 SPATA5Q8NB90 893 aa22.65■■□□□ 1.22
AP3S1-201ENST00000316788 IMPACTQ9P2X3 320 aa22.65■■□□□ 1.22
AP3S1-201ENST00000316788 CTIFO43310 598 aaKnown RBP22.65■■□□□ 1.22
AP3S1-201ENST00000316788 GNAT2P19087 354 aa22.65■■□□□ 1.22
AP3S1-201ENST00000316788 EIF5P55010 431 aaKnown RBP22.65■■□□□ 1.22
AP3S1-201ENST00000316788 GSDMDP57764 484 aa22.65■■□□□ 1.22
AP3S1-201ENST00000316788 WWC3Q9ULE0 1092 aa22.65■■□□□ 1.22
AP3S1-201ENST00000316788 ZBTB43O43298 467 aa22.64■■□□□ 1.21
AP3S1-201ENST00000316788 U2AF2P26368 475 aaKnown RBP eCLIP22.64■■□□□ 1.211e-6■■■□□ 14.8
AP3S1-201ENST00000316788 RCAN1P53805 252 aa22.64■■□□□ 1.21
AP3S1-201ENST00000316788 NLRP12P59046 1061 aa22.64■■□□□ 1.21
AP3S1-201ENST00000316788 SYCP1Q15431 976 aa22.64■■□□□ 1.21
AP3S1-201ENST00000316788 ZRSR1Q15695 479 aaKnown RBP22.64■■□□□ 1.21
AP3S1-201ENST00000316788 NTRK3Q16288 839 aa22.64■■□□□ 1.21
AP3S1-201ENST00000316788 PARP10Q53GL7 1025 aa22.64■■□□□ 1.21
AP3S1-201ENST00000316788 LY9Q9HBG7 655 aa22.64■■□□□ 1.21
AP3S1-201ENST00000316788 PNPLA7Q6ZV29 1317 aa22.64■■□□□ 1.21
AP3S1-201ENST00000316788 PPFIA3O75145 1194 aa22.63■■□□□ 1.21
AP3S1-201ENST00000316788 ZNF202O95125 648 aa22.63■■□□□ 1.21
AP3S1-201ENST00000316788 APPP05067 770 aa22.63■■□□□ 1.21
AP3S1-201ENST00000316788 SLC3A2P08195 630 aaKnown RBP22.63■■□□□ 1.21
AP3S1-201ENST00000316788 KRT40Q6A162 431 aa22.63■■□□□ 1.21
AP3S1-201ENST00000316788 DEFB132Q7Z7B7 95 aa22.63■■□□□ 1.21
AP3S1-201ENST00000316788 AOPEPQ8N6M6 819 aa22.63■■□□□ 1.21
AP3S1-201ENST00000316788 KRT23Q9C075 422 aa22.63■■□□□ 1.21
AP3S1-201ENST00000316788 OSBPL5Q9H0X9 879 aaPredicted RBP22.63■■□□□ 1.21
AP3S1-201ENST00000316788 HPSEQ9Y251 543 aa22.63■■□□□ 1.21
AP3S1-201ENST00000316788 PAXBP1Q9Y5B6 917 aa22.63■■□□□ 1.21
AP3S1-201ENST00000316788 SMTNL1A8MU46 457 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms