RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ADD1P35611 737 aaKnown RBP8.92□□□□□ -0.98
TRIM55-202ENST00000315962 NOLC1Q14978 699 aaKnown RBP eCLIP8.92□□□□□ -0.98
TRIM55-202ENST00000315962 PRR5LQ6MZQ0 368 aa8.92□□□□□ -0.98
TRIM55-202ENST00000315962 IFNL3Q8IZI9 196 aa8.92□□□□□ -0.98
TRIM55-202ENST00000315962 ZNF384Q8TF68 577 aa8.92□□□□□ -0.98
TRIM55-202ENST00000315962 PTPDC1A2A3K4 754 aa8.92□□□□□ -0.98
TRIM55-202ENST00000315962 GOLGA8BA8MQT2 603 aa8.92□□□□□ -0.98
TRIM55-202ENST00000315962 SERPINB2P05120 415 aa8.92□□□□□ -0.98
TRIM55-202ENST00000315962 TRDNQ13061 729 aa8.92□□□□□ -0.98
TRIM55-202ENST00000315962 GRIK5Q16478 980 aa8.92□□□□□ -0.98
TRIM55-202ENST00000315962 LRRFIP1Q32MZ4 808 aaKnown RBP8.92□□□□□ -0.98
TRIM55-202ENST00000315962 CKAP2LQ8IYA6 745 aa8.92□□□□□ -0.98
TRIM55-202ENST00000315962 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.92□□□□□ -0.98
TRIM55-202ENST00000315962 PHKBQ93100 1093 aa8.92□□□□□ -0.98
TRIM55-202ENST00000315962 ZSWIM5Q9P217 1185 aa8.92□□□□□ -0.98
TRIM55-202ENST00000315962 MTMR7Q9Y216 660 aa8.92□□□□□ -0.98
TRIM55-202ENST00000315962 A0A087WWV3 80 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 GSG1L2A8MUP6 293 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 RIMBP2O15034 1052 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 ONECUT3O60422 494 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-202ENST00000315962 POLR3DP05423 398 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-202ENST00000315962 DIXDC1Q155Q3 683 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 CSPP1Q1MSJ5 1256 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 HS1BP3Q53T59 392 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 RC3H1Q5TC82 1133 aaKnown RBP8.91□□□□□ -0.98
TRIM55-202ENST00000315962 NFXL1Q6ZNB6 911 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 FBXW7Q969H0 707 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 SYAP1Q96A49 352 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-202ENST00000315962 NYXQ9GZU5 481 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 CTNNA3Q9UI47 895 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 PRDM4Q9UKN5 801 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 hCG_1642624A0A1W2PR95 340 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 HIBADHP31937 336 aaKnown RBP8.91□□□□□ -0.98
TRIM55-202ENST00000315962 UBE3CQ15386 1083 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 ZNF827Q17R98 1081 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 ZSCAN25Q6NSZ9 544 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 NCOA7Q8NI08 942 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 RPGRQ92834 1020 aaKnown RBP8.91□□□□□ -0.98
TRIM55-202ENST00000315962 DYNC1I1O14576 645 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 ADRA2BP18089 450 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 MCM5P33992 734 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 DDR1Q08345 913 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 NAA30Q147X3 362 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-202ENST00000315962 PIBF1Q8WXW3 757 aa8.91□□□□□ -0.98
TRIM55-202ENST00000315962 ZNF804BA4D1E1 1349 aa8.9□□□□□ -0.98
TRIM55-202ENST00000315962 CARMIL3Q8ND23 1372 aa8.9□□□□□ -0.98
TRIM55-202ENST00000315962 F8W031 263 aaPredicted RBP8.9□□□□□ -0.98
TRIM55-202ENST00000315962 MECOMQ03112 1051 aa8.9□□□□□ -0.98
TRIM55-202ENST00000315962 LRMPQ12912 555 aa8.9□□□□□ -0.98
TRIM55-202ENST00000315962 PPP4R3BQ5MIZ7 849 aa8.9□□□□□ -0.98
TRIM55-202ENST00000315962 NSUN7Q8NE18 718 aaKnown RBP8.9□□□□□ -0.98
TRIM55-202ENST00000315962 PDGFDQ9GZP0 370 aaPredicted RBP8.9□□□□□ -0.98
TRIM55-202ENST00000315962 PATL2C9JE40 543 aaKnown RBP8.9□□□□□ -0.99
TRIM55-202ENST00000315962 CPLX1O14810 134 aa8.9□□□□□ -0.99
TRIM55-202ENST00000315962 HMGB1P09429 215 aaKnown RBP8.9□□□□□ -0.99
TRIM55-202ENST00000315962 CCDC183Q5T5S1 534 aa8.9□□□□□ -0.99
TRIM55-202ENST00000315962 NAA16Q6N069 864 aaPredicted RBP8.9□□□□□ -0.99
TRIM55-202ENST00000315962 LUZP1Q86V48 1076 aa8.9□□□□□ -0.99
TRIM55-202ENST00000315962 KLHL34Q8N239 644 aa8.9□□□□□ -0.99
TRIM55-202ENST00000315962 KCNF1Q9H3M0 494 aa8.9□□□□□ -0.99
TRIM55-202ENST00000315962 GNL3LQ9NVN8 582 aaKnown RBP8.9□□□□□ -0.99
TRIM55-202ENST00000315962 MAGEB6P1A0A0J9YX57 407 aa8.89□□□□□ -0.99
TRIM55-202ENST00000315962 C6orf229H3BNL8 230 aa8.89□□□□□ -0.99
TRIM55-202ENST00000315962 NMT2O60551 498 aa8.89□□□□□ -0.99
TRIM55-202ENST00000315962 SLC10A5Q5PT55 438 aa8.89□□□□□ -0.99
TRIM55-202ENST00000315962 MB21D2Q8IYB1 491 aaPredicted RBP8.89□□□□□ -0.99
TRIM55-202ENST00000315962 NUP133Q8WUM0 1156 aa8.89□□□□□ -0.99
TRIM55-202ENST00000315962 COL1A1P02452 1464 aaPredicted RBP8.89□□□□□ -0.99
TRIM55-202ENST00000315962 A0A0U1RQG5 324 aaPredicted RBP8.89□□□□□ -0.99
TRIM55-202ENST00000315962 IFIT3O14879 490 aaKnown RBP8.89□□□□□ -0.99
TRIM55-202ENST00000315962 CYP2D6P10635 497 aa8.89□□□□□ -0.99
TRIM55-202ENST00000315962 FDPSP14324 419 aaKnown RBP8.89□□□□□ -0.99
TRIM55-202ENST00000315962 PTGS1P23219 599 aa8.89□□□□□ -0.99
TRIM55-202ENST00000315962 U2AF2P26368 475 aaKnown RBP eCLIP8.89□□□□□ -0.99
TRIM55-202ENST00000315962 GPSM2P81274 684 aa8.89□□□□□ -0.99
TRIM55-202ENST00000315962 UBE4AQ14139 1066 aa8.89□□□□□ -0.99
TRIM55-202ENST00000315962 TMEM67Q5HYA8 995 aa8.89□□□□□ -0.99
TRIM55-202ENST00000315962 TTC6Q86TZ1 520 aa8.89□□□□□ -0.99
TRIM55-202ENST00000315962 COL23A1Q86Y22 540 aaPredicted RBP8.89□□□□□ -0.99
TRIM55-202ENST00000315962 ZNF512BQ96KM6 892 aaPredicted RBP8.89□□□□□ -0.99
TRIM55-202ENST00000315962 MXD3Q9BW11 206 aa8.89□□□□□ -0.99
TRIM55-202ENST00000315962 NRBP1Q9UHY1 535 aa8.89□□□□□ -0.99
TRIM55-202ENST00000315962 HPS5Q9UPZ3 1129 aa8.89□□□□□ -0.99
TRIM55-202ENST00000315962 USP17L12C9JPN9 530 aa8.88□□□□□ -0.99
TRIM55-202ENST00000315962 USP17L21D6R901 530 aa8.88□□□□□ -0.99
TRIM55-202ENST00000315962 RANBP6O60518 1105 aaKnown RBP8.88□□□□□ -0.99
TRIM55-202ENST00000315962 PFKFB2O60825 505 aa8.88□□□□□ -0.99
TRIM55-202ENST00000315962 UFL1O94874 794 aa8.88□□□□□ -0.99
TRIM55-202ENST00000315962 LIG1P18858 919 aa8.88□□□□□ -0.99
TRIM55-202ENST00000315962 CDC27P30260 824 aa8.88□□□□□ -0.99
TRIM55-202ENST00000315962 FAM47AQ5JRC9 791 aa8.88□□□□□ -0.99
TRIM55-202ENST00000315962 MFSD6Q6ZSS7 791 aa8.88□□□□□ -0.99
TRIM55-202ENST00000315962 MYRIPQ8NFW9 859 aa8.88□□□□□ -0.99
TRIM55-202ENST00000315962 ERCC4Q92889 916 aaPredicted RBP8.88□□□□□ -0.99
TRIM55-202ENST00000315962 C16orf45Q96MC5 204 aaPredicted RBP8.88□□□□□ -0.99
TRIM55-202ENST00000315962 RIOK3O14730 519 aaKnown RBP8.88□□□□□ -0.99
TRIM55-202ENST00000315962 DRC7Q8IY82 874 aa8.87□□□□□ -0.99
TRIM55-202ENST00000315962 NWD2Q9ULI1 1742 aa8.87□□□□□ -0.99
TRIM55-202ENST00000315962 RFX7Q2KHR2 1363 aa8.87□□□□□ -0.99
TRIM55-202ENST00000315962 DZIP1Q86YF9 867 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms