RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 IGDCC4Q8TDY8 1250 aa23.04■■□□□ 1.28
NFIL3-201ENST00000297689 KIF28PB7ZC32 967 aa23.03■■□□□ 1.28
NFIL3-201ENST00000297689 TRDNQ13061 729 aa23.03■■□□□ 1.28
NFIL3-201ENST00000297689 KCNG4Q8TDN1 519 aa23.03■■□□□ 1.28
NFIL3-201ENST00000297689 TRIM5Q9C035 493 aa23.03■■□□□ 1.28
NFIL3-201ENST00000297689 GJB4Q9NTQ9 266 aa23.03■■□□□ 1.28
NFIL3-201ENST00000297689 LAMB2P55268 1798 aa23.03■■□□□ 1.28
NFIL3-201ENST00000297689 CPLX1O14810 134 aa23.02■■□□□ 1.28
NFIL3-201ENST00000297689 NTSR2O95665 410 aa23.02■■□□□ 1.28
NFIL3-201ENST00000297689 KCNQ4P56696 695 aa23.02■■□□□ 1.28
NFIL3-201ENST00000297689 CCDC186Q7Z3E2 898 aa23.02■■□□□ 1.28
NFIL3-201ENST00000297689 SPATA5Q8NB90 893 aa23.02■■□□□ 1.28
NFIL3-201ENST00000297689 HELBQ8NG08 1087 aaPredicted RBP23.02■■□□□ 1.28
NFIL3-201ENST00000297689 TMEM87BQ96K49 555 aa23.02■■□□□ 1.28
NFIL3-201ENST00000297689 RTL9Q8NET4 1388 aa23.02■■□□□ 1.28
NFIL3-201ENST00000297689 ONECUT3O60422 494 aaPredicted RBP23.02■■□□□ 1.28
NFIL3-201ENST00000297689 GTF2F1P35269 517 aaKnown RBP eCLIP23.02■■□□□ 1.28
NFIL3-201ENST00000297689 PARP10Q53GL7 1025 aa23.02■■□□□ 1.28
NFIL3-201ENST00000297689 APOA5Q6Q788 366 aa23.02■■□□□ 1.28
NFIL3-201ENST00000297689 SGMS1Q86VZ5 419 aa23.02■■□□□ 1.28
NFIL3-201ENST00000297689 RAB11FIP4Q86YS3 637 aa23.02■■□□□ 1.28
NFIL3-201ENST00000297689 PATL2C9JE40 543 aaKnown RBP23.01■■□□□ 1.27
NFIL3-201ENST00000297689 POLR3DP05423 398 aaPredicted RBP23.01■■□□□ 1.27
NFIL3-201ENST00000297689 RASGRF1Q13972 1273 aa23.01■■□□□ 1.27
NFIL3-201ENST00000297689 NTRK3Q16288 839 aa23.01■■□□□ 1.27
NFIL3-201ENST00000297689 AXDND1Q5T1B0 1012 aaPredicted RBP23.01■■□□□ 1.27
NFIL3-201ENST00000297689 EPB41L4AQ9HCS5 686 aaPredicted RBP23.01■■□□□ 1.27
NFIL3-201ENST00000297689 NRBP1Q9UHY1 535 aa23.01■■□□□ 1.27
NFIL3-201ENST00000297689 TRPC5Q9UL62 973 aaPredicted RBP23.01■■□□□ 1.27
NFIL3-201ENST00000297689 NIP7Q9Y221 180 aaKnown RBP eCLIP23.01■■□□□ 1.27
NFIL3-201ENST00000297689 DHX40Q8IX18 779 aaKnown RBP23.01■■□□□ 1.27
NFIL3-201ENST00000297689 SENP2Q9HC62 589 aa23.01■■□□□ 1.27
NFIL3-201ENST00000297689 FAM217BQ9NTX9 383 aaPredicted RBP23.01■■□□□ 1.27
NFIL3-201ENST00000297689 ANO10Q9NW15 660 aa23.01■■□□□ 1.27
NFIL3-201ENST00000297689 SPTLC2O15270 562 aa23■■□□□ 1.27
NFIL3-201ENST00000297689 SLC5A1P13866 664 aa23■■□□□ 1.27
NFIL3-201ENST00000297689 NDUFA8P51970 172 aa23■■□□□ 1.27
NFIL3-201ENST00000297689 MRFAP1L1Q96HT8 127 aa23■■□□□ 1.27
NFIL3-201ENST00000297689 PDCL3Q9H2J4 239 aa23■■□□□ 1.27
NFIL3-201ENST00000297689 SEC31BQ9NQW1 1179 aa23■■□□□ 1.27
NFIL3-201ENST00000297689 TACC3Q9Y6A5 838 aa23■■□□□ 1.27
NFIL3-201ENST00000297689 TIAM2Q8IVF5 1701 aa22.99■■□□□ 1.27
NFIL3-201ENST00000297689 B4E1Z4 1266 aa22.99■■□□□ 1.27
NFIL3-201ENST00000297689 CDC27P30260 824 aa22.99■■□□□ 1.27
NFIL3-201ENST00000297689 STK38Q15208 465 aa22.99■■□□□ 1.27
NFIL3-201ENST00000297689 LY9Q9HBG7 655 aa22.99■■□□□ 1.27
NFIL3-201ENST00000297689 A0A1B0GVL5 298 aa22.99■■□□□ 1.27
NFIL3-201ENST00000297689 LIFRP42702 1097 aa22.99■■□□□ 1.27
NFIL3-201ENST00000297689 METAP2P50579 478 aaKnown RBP eCLIP22.99■■□□□ 1.27
NFIL3-201ENST00000297689 DNTTIP2Q5QJE6 756 aaKnown RBP22.99■■□□□ 1.27
NFIL3-201ENST00000297689 IFNL3Q8IZI9 196 aa22.99■■□□□ 1.27
NFIL3-201ENST00000297689 AIDAQ96BJ3 306 aa22.99■■□□□ 1.27
NFIL3-201ENST00000297689 COL4A1P02462 1669 aa22.98■■□□□ 1.27
NFIL3-201ENST00000297689 BTAF1O14981 1849 aa22.98■■□□□ 1.27
NFIL3-201ENST00000297689 SNAP23O00161 211 aa22.98■■□□□ 1.27
NFIL3-201ENST00000297689 APPP05067 770 aa22.98■■□□□ 1.27
NFIL3-201ENST00000297689 ANO1Q5XXA6 986 aa22.98■■□□□ 1.27
NFIL3-201ENST00000297689 QTRT2Q9H974 415 aaKnown RBP22.97■■□□□ 1.27
NFIL3-201ENST00000297689 NID2Q14112 1375 aa22.97■■□□□ 1.27
NFIL3-201ENST00000297689 GSG1L2A8MUP6 293 aa22.97■■□□□ 1.27
NFIL3-201ENST00000297689 MAP3K12Q12852 859 aa22.97■■□□□ 1.27
NFIL3-201ENST00000297689 SLC39A14Q15043 492 aa22.97■■□□□ 1.27
NFIL3-201ENST00000297689 SMIM5Q71RC9 77 aa22.97■■□□□ 1.27
NFIL3-201ENST00000297689 AIFM3Q96NN9 605 aa22.97■■□□□ 1.27
NFIL3-201ENST00000297689 KIAA1468Q9P260 1216 aa22.97■■□□□ 1.27
NFIL3-201ENST00000297689 CDKL5O76039 1030 aa22.96■■□□□ 1.27
NFIL3-201ENST00000297689 CMA1P23946 247 aa22.96■■□□□ 1.27
NFIL3-201ENST00000297689 LRMPQ12912 555 aa22.96■■□□□ 1.27
NFIL3-201ENST00000297689 CCDC144BQ3MJ40 725 aa22.96■■□□□ 1.27
NFIL3-201ENST00000297689 CCDC144CPQ8IYA2 1237 aa22.96■■□□□ 1.27
NFIL3-201ENST00000297689 MAGEB6Q8N7X4 407 aa22.96■■□□□ 1.27
NFIL3-201ENST00000297689 ALG1Q9BT22 464 aa22.96■■□□□ 1.27
NFIL3-201ENST00000297689 CLIP2Q9UDT6 1046 aa22.96■■□□□ 1.27
NFIL3-201ENST00000297689 GOLGA6L19H0YKK7 550 aa22.96■■□□□ 1.27
NFIL3-201ENST00000297689 INCENPQ9NQS7 918 aa22.96■■□□□ 1.27
NFIL3-201ENST00000297689 ZSWIM5Q9P217 1185 aa22.96■■□□□ 1.27
NFIL3-201ENST00000297689 NHSQ6T4R5 1651 aa22.96■■□□□ 1.27
NFIL3-201ENST00000297689 ECM29Q5VYK3 1845 aa22.95■■□□□ 1.27
NFIL3-201ENST00000297689 PNPLA7Q6ZV29 1317 aa22.95■■□□□ 1.26
NFIL3-201ENST00000297689 CNTNAP4Q9C0A0 1308 aa22.95■■□□□ 1.26
NFIL3-201ENST00000297689 A0A087WWV3 80 aa22.95■■□□□ 1.26
NFIL3-201ENST00000297689 RANBP6O60518 1105 aaKnown RBP22.95■■□□□ 1.26
NFIL3-201ENST00000297689 MBD4O95243 580 aa22.95■■□□□ 1.26
NFIL3-201ENST00000297689 KRT40Q6A162 431 aa22.95■■□□□ 1.26
NFIL3-201ENST00000297689 SYNE3Q6ZMZ3 975 aa22.95■■□□□ 1.26
NFIL3-201ENST00000297689 CACTINQ8WUQ7 758 aaKnown RBP22.95■■□□□ 1.26
NFIL3-201ENST00000297689 MPHOSPH8Q99549 860 aa22.95■■□□□ 1.26
NFIL3-201ENST00000297689 CHD4Q14839 1912 aa22.95■■□□□ 1.26
NFIL3-201ENST00000297689 ZBTB43O43298 467 aa22.94■■□□□ 1.26
NFIL3-201ENST00000297689 U2AF2P26368 475 aaKnown RBP eCLIP22.94■■□□□ 1.263e-6■■■□□ 15.8
NFIL3-201ENST00000297689 SF3A1Q15459 793 aaKnown RBP22.94■■□□□ 1.26
NFIL3-201ENST00000297689 FAM182BQ5T319 152 aa22.94■■□□□ 1.26
NFIL3-201ENST00000297689 BPIFA3Q9BQP9 254 aa22.94■■□□□ 1.26
NFIL3-201ENST00000297689 CASZ1Q86V15 1759 aa22.94■■□□□ 1.26
NFIL3-201ENST00000297689 FAM237AA0A1B0GTK4 181 aa22.94■■□□□ 1.26
NFIL3-201ENST00000297689 WDHD1O75717 1129 aaPredicted RBP22.94■■□□□ 1.26
NFIL3-201ENST00000297689 RBM10P98175 930 aaKnown RBP22.94■■□□□ 1.26
NFIL3-201ENST00000297689 PTPAQ15257 358 aa22.94■■□□□ 1.26
NFIL3-201ENST00000297689 CCDC152Q4G0S7 254 aa22.94■■□□□ 1.26
NFIL3-201ENST00000297689 CLEC4GQ6UXB4 293 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms