RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 VPS72Q15906 364 aa24.44■■□□□ 1.5
CCDC130-201ENST00000221554 ANO1Q5XXA6 986 aa24.44■■□□□ 1.5
CCDC130-201ENST00000221554 MPNDQ8N594 471 aa24.44■■□□□ 1.5
CCDC130-201ENST00000221554 JMYQ8N9B5 988 aa24.44■■□□□ 1.5
CCDC130-201ENST00000221554 WASF1Q92558 559 aa24.44■■□□□ 1.5
CCDC130-201ENST00000221554 NAPBQ9H115 298 aa24.44■■□□□ 1.5
CCDC130-201ENST00000221554 C4AP0C0L4 1744 aa24.43■■□□□ 1.5
CCDC130-201ENST00000221554 C4BP0C0L5 1744 aa24.43■■□□□ 1.5
CCDC130-201ENST00000221554 CICQ96RK0 1608 aaPredicted RBP24.43■■□□□ 1.5
CCDC130-201ENST00000221554 ZBTB43O43298 467 aa24.43■■□□□ 1.5
CCDC130-201ENST00000221554 DDB1Q16531 1140 aa24.43■■□□□ 1.5
CCDC130-201ENST00000221554 ZNF772Q68DY9 489 aaPredicted RBP24.43■■□□□ 1.5
CCDC130-201ENST00000221554 APOA5Q6Q788 366 aa24.43■■□□□ 1.5
CCDC130-201ENST00000221554 WWC3Q9ULE0 1092 aa24.43■■□□□ 1.5
CCDC130-201ENST00000221554 DOT1LQ8TEK3 1739 aa24.43■■□□□ 1.5
CCDC130-201ENST00000221554 CMA1P23946 247 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 TRIM29Q14134 588 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 CYB5R4Q7L1T6 521 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 IFNL3Q8IZI9 196 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 IGDCC4Q8TDY8 1250 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 BPIFA3Q9BQP9 254 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 ALG1Q9BT22 464 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 SPATA31A5Q5VU36 1347 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 PNPLA7Q6ZV29 1317 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 SPATA31A7Q8IWB4 1347 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 STK36Q9NRP7 1315 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 RREB1Q92766 1687 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 CCDC186Q7Z3E2 898 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 TMTC2Q8N394 836 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 TIGD1Q96MW7 591 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 CDC5LQ99459 802 aaKnown RBP24.42■■□□□ 1.5
CCDC130-201ENST00000221554 CLIP2Q9UDT6 1046 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 TRPC5Q9UL62 973 aaPredicted RBP24.42■■□□□ 1.5
CCDC130-201ENST00000221554 ZNF652Q9Y2D9 606 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 CLIC4Q9Y696 253 aa24.42■■□□□ 1.5
CCDC130-201ENST00000221554 DOCK2Q92608 1830 aa24.41■■□□□ 1.5
CCDC130-201ENST00000221554 PPP6R2O75170 966 aa24.41■■□□□ 1.5
CCDC130-201ENST00000221554 POLR3DP05423 398 aaPredicted RBP24.41■■□□□ 1.5
CCDC130-201ENST00000221554 GTF2F1P35269 517 aaKnown RBP eCLIP24.41■■□□□ 1.5
CCDC130-201ENST00000221554 ATP6V1AP38606 617 aa24.41■■□□□ 1.5
CCDC130-201ENST00000221554 CRKLP46109 303 aaKnown RBP24.41■■□□□ 1.5
CCDC130-201ENST00000221554 RBM6P78332 1123 aaKnown RBP24.41■■□□□ 1.5
CCDC130-201ENST00000221554 DHX8Q14562 1220 aaKnown RBP24.41■■□□□ 1.5
CCDC130-201ENST00000221554 SLC39A14Q15043 492 aa24.41■■□□□ 1.5
CCDC130-201ENST00000221554 NFXL1Q6ZNB6 911 aa24.41■■□□□ 1.5
CCDC130-201ENST00000221554 SPATA31A1Q5TZJ5 1347 aa24.41■■□□□ 1.5
CCDC130-201ENST00000221554 EP400Q96L91 3159 aa24.41■■□□□ 1.5
CCDC130-201ENST00000221554 NID2Q14112 1375 aa24.4■■□□□ 1.5
CCDC130-201ENST00000221554 B4E1Z4 1266 aa24.4■■□□□ 1.5
CCDC130-201ENST00000221554 CAMTA2O94983 1202 aa24.4■■□□□ 1.5
CCDC130-201ENST00000221554 PTGS1P23219 599 aa24.4■■□□□ 1.5
CCDC130-201ENST00000221554 IARSP41252 1262 aaKnown RBP24.4■■□□□ 1.5
CCDC130-201ENST00000221554 RCAN1P53805 252 aa24.4■■□□□ 1.5
CCDC130-201ENST00000221554 SART3Q15020 963 aaKnown RBP24.4■■□□□ 1.5
CCDC130-201ENST00000221554 TMEM67Q5HYA8 995 aa24.4■■□□□ 1.5
CCDC130-201ENST00000221554 MAGEB6Q8N7X4 407 aa24.4■■□□□ 1.5
CCDC130-201ENST00000221554 SMARCC1Q92922 1105 aaPredicted RBP24.4■■□□□ 1.5
CCDC130-201ENST00000221554 KIAA1468Q9P260 1216 aa24.4■■□□□ 1.5
CCDC130-201ENST00000221554 BRWD3Q6RI45 1802 aa24.4■■□□□ 1.5
CCDC130-201ENST00000221554 RASGRF1Q13972 1273 aa24.39■■□□□ 1.5
CCDC130-201ENST00000221554 AKNAD1Q5T1N1 836 aa24.39■■□□□ 1.5
CCDC130-201ENST00000221554 GJD4Q96KN9 370 aaPredicted RBP24.39■■□□□ 1.5
CCDC130-201ENST00000221554 RNF41Q9H4P4 317 aaPredicted RBP24.39■■□□□ 1.5
CCDC130-201ENST00000221554 PYCARDQ9ULZ3 195 aa24.39■■□□□ 1.5
CCDC130-201ENST00000221554 LOC102724428A0A0B4J2F2 783 aa24.39■■□□□ 1.49
CCDC130-201ENST00000221554 RGL2O15211 777 aa24.39■■□□□ 1.49
CCDC130-201ENST00000221554 SIK1P57059 783 aa24.39■■□□□ 1.49
CCDC130-201ENST00000221554 OTUD7BQ6GQQ9 843 aa24.39■■□□□ 1.49
CCDC130-201ENST00000221554 MFSD6Q6ZSS7 791 aa24.39■■□□□ 1.49
CCDC130-201ENST00000221554 C11orf57Q6ZUT1 292 aaPredicted RBP24.39■■□□□ 1.49
CCDC130-201ENST00000221554 HELBQ8NG08 1087 aaPredicted RBP24.39■■□□□ 1.49
CCDC130-201ENST00000221554 LY9Q9HBG7 655 aa24.39■■□□□ 1.49
CCDC130-201ENST00000221554 SLC12A7Q9Y666 1083 aa24.39■■□□□ 1.49
CCDC130-201ENST00000221554 CCDC69A6NI79 296 aa24.38■■□□□ 1.49
CCDC130-201ENST00000221554 GOLGA8AA7E2F4 631 aa24.38■■□□□ 1.49
CCDC130-201ENST00000221554 MBD4O95243 580 aa24.38■■□□□ 1.49
CCDC130-201ENST00000221554 NDUFA8P51970 172 aa24.38■■□□□ 1.49
CCDC130-201ENST00000221554 GLIPR1L2Q4G1C9 344 aa24.38■■□□□ 1.49
CCDC130-201ENST00000221554 TIAM2Q8IVF5 1701 aa24.37■■□□□ 1.49
CCDC130-201ENST00000221554 A0A1B0GVL5 298 aa24.37■■□□□ 1.49
CCDC130-201ENST00000221554 TPM4P67936 248 aa24.37■■□□□ 1.49
CCDC130-201ENST00000221554 SSRP1Q08945 709 aaKnown RBP24.37■■□□□ 1.49
CCDC130-201ENST00000221554 GNL2Q13823 731 aaKnown RBP24.37■■□□□ 1.49
CCDC130-201ENST00000221554 KRT40Q6A162 431 aa24.37■■□□□ 1.49
CCDC130-201ENST00000221554 CLEC4GQ6UXB4 293 aa24.37■■□□□ 1.49
CCDC130-201ENST00000221554 STAG1Q8WVM7 1258 aa24.37■■□□□ 1.49
CCDC130-201ENST00000221554 LAMB2P55268 1798 aa24.37■■□□□ 1.49
CCDC130-201ENST00000221554 CCDC196A0A1B0GTZ2 297 aa24.37■■□□□ 1.49
CCDC130-201ENST00000221554 IFIT3O14879 490 aaKnown RBP24.37■■□□□ 1.49
CCDC130-201ENST00000221554 PPFIA3O75145 1194 aa24.37■■□□□ 1.49
CCDC130-201ENST00000221554 U2AF2P26368 475 aaKnown RBP eCLIP24.37■■□□□ 1.492e-6■■■□□ 18.8
CCDC130-201ENST00000221554 DHX40Q8IX18 779 aaKnown RBP24.37■■□□□ 1.49
CCDC130-201ENST00000221554 NEDD4P46934 1319 aa24.36■■□□□ 1.49
CCDC130-201ENST00000221554 GSG1L2A8MUP6 293 aa24.36■■□□□ 1.49
CCDC130-201ENST00000221554 ZNF202O95125 648 aa24.36■■□□□ 1.49
CCDC130-201ENST00000221554 NTSR2O95665 410 aa24.36■■□□□ 1.49
CCDC130-201ENST00000221554 SLC3A2P08195 630 aaKnown RBP24.36■■□□□ 1.49
CCDC130-201ENST00000221554 PPP2R5BQ15173 497 aa24.36■■□□□ 1.49
CCDC130-201ENST00000221554 NTRK3Q16288 839 aa24.36■■□□□ 1.49
CCDC130-201ENST00000221554 GNL3LQ9NVN8 582 aaKnown RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms