RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Plcd3Q8K2J0 785 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Paf1Q8K2T8 535 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Gys2Q8VCB3 704 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 ParnQ8VDG3 624 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ssr1Q9CY50 286 aaKnown RBP10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Nap1l5Q9JJF0 156 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Myo5cE9Q1F5 1742 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Gm30191A0A0U1RNT7 187 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Nfil3O08750 462 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Eef2kO08796 724 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Zfp251Q6PCX8 632 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ctdp1Q7TSG2 960 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Bola3Q8CEI1 110 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Yeats4Q9CR11 227 aaKnown RBP10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Spata31d1bE9QA57 1361 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Cdhr2E9Q7P9 1308 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Znf568E9PYI1 671 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 SsbP32067 415 aaKnown RBP10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Nap1l2P51860 460 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Taok3Q8BYC6 898 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Q9D5Q8 446 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Xpo4Q9ESJ0 1151 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Pkd2l2Q9JLG4 621 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Akap12Q9WTQ5 1684 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Usp42B2RQC2 1324 aaKnown RBP10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Psmb7P70195 277 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Map9Q3TRR0 646 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Cc2d1bQ8BRN9 848 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Slc4a8Q8JZR6 1089 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Nod2Q8K3Z0 1020 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Plagl1Q9JLQ4 704 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Abca17E9PX95 1733 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Pcdhb9E9Q5G2 828 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Atp2b1G5E829 1220 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Eme2Q56A04 373 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Tsg101Q61187 391 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Asic1Q6NXK8 526 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ankrd23Q812A3 306 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Rnf187Q8BFX1 236 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Trim52Q8CDV4 233 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Adcy9P51830 1353 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Gjc1P28229 396 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Exoc1Q8R3S6 894 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Rbm33Q9CXK9 1231 aaKnown RBP10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Hip1rQ9JKY5 1068 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Irx4Q9QY61 515 aa10.72□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Pard3Q99NH2 1333 aa10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Lipo1J3QME6 396 aa10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Atp6v1aP50516 617 aaKnown RBP10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Pfkfb1P70266 471 aa10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Arglu1Q3UL36 271 aaKnown RBP10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Fez2Q6TYB5 348 aa10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ttc27Q8CD92 847 aa10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Hs2st1Q8R3H7 356 aa10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Xrcc4Q924T3 326 aa10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Nrbp1Q99J45 535 aa10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Clic4Q9QYB1 253 aa10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Lnx1O70263 728 aa10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 HmcesQ8R1M0 353 aaKnown RBP10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Pcdhb5Q91XZ5 792 aa10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Pold4Q9CWP8 107 aa10.71□□□□□ -0.69
Ldlr-202ENSMUST00000213114 MypnQ5DTJ9 1315 aa10.71□□□□□ -0.7
Ldlr-202ENSMUST00000213114 InhbeO08717 350 aa10.71□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Mtx1P47802 317 aa10.71□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Jade2Q6ZQF7 829 aa10.71□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Fam76aQ922G2 307 aa10.71□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Cul5Q9D5V5 780 aa10.71□□□□□ -0.7
Ldlr-202ENSMUST00000213114 L1td1Q587J6 782 aaKnown RBP10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ddx10Q80Y44 875 aaKnown RBP10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ccdc181Q80ZU5 509 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Gm5624F6ZZG8 207 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Serpinb6bO08804 377 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Usp28Q5I043 1051 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Zswim4Q8C7B8 1101 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Bmp2kQ91Z96 1138 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Nfe2l3Q9WTM4 660 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Nrxn1Q9CS84 1514 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Cyp3a57D3YYZ0 503 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 PparaP23204 468 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Large2Q5XPT3 690 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Zfp317Q8C0Q5 607 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Mb21d2Q8C525 428 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Frat2Q8K025 231 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Emilin1Q99K41 1017 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Smtnl1Q99LM3 459 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ccdc83Q9D4V3 305 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Aox2Q5SGK3 1345 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Simc1E9Q6E9 1354 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Col15a1O35206 1367 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Nfxl1E9Q8I7 918 aaKnown RBP10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Clic6Q8BHB9 596 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ciao1Q99KN2 339 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Chaf1aQ9QWF0 911 aa10.7□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Palm3A2TJV2 734 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ccdc85cE9Q6B2 420 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Atp1b3P97370 278 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Cd274Q9EP73 290 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ube3bQ9ES34 1070 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Tbc1d4Q8BYJ6 1307 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Prr5lA2AVJ5 370 aa10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms