RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Fam83bQ0VBM2 1012 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Rcan3Q9JKK0 239 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Fer1l6E0CZ42 1862 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Map3k15A2AQW0 1331 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 PnnO35691 725 aaKnown RBP11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Cd3dP04235 173 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Pde11aP0C1Q2 933 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Gm5592Q3V0A6 857 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Slc44a1Q6X893 653 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Nup133Q8R0G9 1155 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Pde6aP27664 859 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Dynll1P63168 89 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Zfp317Q8C0Q5 607 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 DpydQ8CHR6 1025 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Fam13bQ8K2H3 851 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Gpr108Q91WD0 569 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Abca3Q8R420 1704 aa11.09□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 MeiocA2AG06 965 aa11.08□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Casp12O08736 419 aa11.08□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Dnm1P39053 867 aa11.08□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Tlr8P58682 1032 aa11.08□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Msl1Q6PDM1 616 aa11.08□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Strip1Q8C079 837 aa11.08□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Rec8Q8C5S7 591 aa11.08□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Bola3Q8CEI1 110 aa11.08□□□□□ -0.63
Sh3rf1-202ENSMUST00000209611 Arap2Q8BZ05 1703 aa11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Zfyve9A2A8R0 1397 aa11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Ubn2Q80WC1 1314 aa11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Frmd7A2AD83 703 aa11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Kdm4aQ8BW72 1064 aa11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Rai14Q9EP71 979 aaKnown RBP11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Cspp1B2RX88 1205 aa11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Glg1Q61543 1175 aaKnown RBP11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Ddrgk1Q80WW9 315 aa11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 HlfQ8BW74 295 aa11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Lrrc2Q8VDB8 371 aa11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Cyp2d34L7N463 504 aa11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Csrnp1P59054 583 aa11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Olfr118Q7TRJ6 321 aa11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Paf1Q8K2T8 535 aa11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Akt1s1Q9D1F4 257 aa11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Mrvi1Q9WUX5 899 aaKnown RBP11.08□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Rtn1Q8K0T0 780 aa11.07□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Lgr5Q9Z1P4 907 aa11.07□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Mast2Q60592 1734 aa11.07□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Slc1a4O35874 532 aa11.07□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Acnat2Q8BGG9 420 aa11.07□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Trim59Q922Y2 403 aa11.07□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Slfn1Q9Z0I7 337 aa11.07□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 PcQ05920 1178 aa11.07□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Traf3ip1Q149C2 625 aa11.07□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Gtf3c6Q9D8P7 227 aa11.07□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Kndc1Q0KK55 1742 aa11.07□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Cfap73J3QPZ5 306 aa11.06□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 VmacQ8BP01 174 aa11.06□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Col20a1Q923P0 1320 aa11.06□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Tbc1d8bA3KGB4 1114 aa11.06□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Rhbdl3P58873 404 aa11.06□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Kif22Q3V300 660 aa11.06□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Vars2Q3U2A8 1060 aa11.06□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Snx13Q6PHS6 957 aa11.06□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Tbc1d5Q80XQ2 815 aa11.06□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Cdca8Q8BHX3 289 aa11.06□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Stag1Q9D3E6 1258 aa11.06□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Fez1Q8K0X8 392 aa11.06□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Cep89Q9CZX2 791 aa11.06□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Rgs9O54828 675 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Tmem59lQ7TNI2 337 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Smc2Q8CG48 1191 aaKnown RBP11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Myl6bQ8CI43 207 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Sh3bp5lQ99LH9 392 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Chd1lQ9CXF7 900 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Hmgn5Q9JL35 406 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Sipa1l3G3X9J0 1776 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Dnai2A2AC93 623 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Prr16A3KMN5 304 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Foxp1P58462 705 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 TrhQ62361 256 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Hps6Q8BLY7 805 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Sumf1Q8R0F3 372 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Col4a3bpQ9EQG9 624 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Efcc1Q9JJF6 558 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Casz1Q9CWL2 1761 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Usp25P57080 1055 aa11.05□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Tpm3-rs7D3Z2H9 248 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Gm973E9Q295 1059 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Sptlc2P97363 560 aaKnown RBP11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Suclg2Q9Z2I8 433 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Cyp2ab1S4R196 498 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Paxip1Q6NZQ4 1056 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Wdr19Q3UGF1 1341 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 1700113H08RikE9Q9Q5 327 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Lnx1O70263 728 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Stx8O88983 236 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Terf1P70371 421 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Zfp51Q3U4L8 781 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Gm28047Q3US59 414 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Atxn2lQ7TQH0 1049 aaKnown RBP11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Mknk2Q8CDB0 459 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Uba5Q8VE47 403 aa11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms