RNA–Protein interactions for RNA: ENSMUST00000206914.1

Rnf40-206, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-206ENSMUST00000206914 Dnajc5gQ8C632 165 aa12.37□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Ccdc12Q8R344 166 aaKnown RBP12.37□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Tpm3-rs7D3Z2H9 248 aa12.37□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Dnm1P39053 867 aa12.37□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Epha2Q03145 977 aa12.37□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Tc2nQ91XT6 489 aa12.37□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Nwd2Q6P5U7 1742 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Atp8b1Q148W0 1251 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Krt39Q6IFX4 482 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Phldb2Q8K1N2 1249 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Ehd4Q9EQP2 541 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Rcan1Q9JHG6 198 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 PigbQ9JJQ0 542 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Slc4a1P04919 929 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 SsbP32067 415 aaKnown RBP12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Baiap2l1Q9DBJ3 514 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Ubr2Q6WKZ8 1755 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Cdr2P97817 455 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Dpf2Q61103 391 aaKnown RBP12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Cnot6lQ8VEG6 555 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Ssfa2Q922B9 1252 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Iqca1Q9CUL5 857 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Cbx6Q9DBY5 414 aa12.36□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Cyp26a1O55127 497 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Emc10Q3TAS6 258 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Ankk1Q8BZ25 745 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Gpr108Q91WD0 569 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Gm3409A0A0G2JE67 319 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Pde4bB1AWC9 736 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Tdo2P48776 406 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Lamb3Q61087 1168 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 FntaQ61239 377 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Haus7Q8BKT8 364 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 GphnQ8BUV3 769 aaKnown RBP12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Ppfibp1Q8C8U0 969 aaKnown RBP12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Shisa4Q8CA71 197 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Bola3Q8CEI1 110 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Tubgcp2Q921G8 905 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Pola2P33611 600 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Jakmip3Q5DTN8 844 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Asic4Q7TNS7 539 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Dzip1Q8BMD2 852 aa12.35□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Pla2g4bP0C871 782 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Tubb5P99024 444 aaKnown RBP12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 GscQ02591 256 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Mkrn3Q60764 544 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Cdc23Q8BGZ4 597 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 4930572O03RikQ8C5Y0 211 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Wasf1Q8R5H6 559 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Brms1Q99N20 246 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Ccdc96Q9CR92 584 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Gcom1E9PZ54 550 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 TsksO54887 585 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 CrklP47941 303 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 MyzapQ3UIJ9 466 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Clec16aQ80U30 1036 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 VmacQ8BP01 174 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Alx1Q8C8B0 326 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Arhgef6Q8K4I3 771 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Smc1bQ920F6 1248 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Zbtb43Q9DAI4 467 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Exoc3l2D3YUP5 789 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 AK157302I3ITR1 129 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Myd88P22366 296 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Drc7Q6V3W6 876 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Fam160b2Q80YR2 744 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Tmx1Q8VBT0 278 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Fam213aQ9CYH2 218 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Isca1Q9D924 129 aa12.34□□□□□ -0.43
Rnf40-206ENSMUST00000206914 Atp8b5A3FIN4 1183 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Cyp3a59D3Z2W7 503 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Adssl1P28650 457 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Usp5P56399 858 aaKnown RBP12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Foxp1P58462 705 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Zranb3Q6NZP1 1069 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Eif3bQ8JZQ9 803 aaKnown RBP12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 NenfQ9CQ45 171 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Efcab2Q9CQ46 164 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Ccdc39Q9D5Y1 937 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Cdc27A2A6Q5 825 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Ift88Q61371 824 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Smc2Q8CG48 1191 aaKnown RBP12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Mrc1Q61830 1456 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Tnks1bp1P58871 1720 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Nek1P51954 1203 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Eif5P59325 429 aaKnown RBP12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Map3k11Q80XI6 850 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Anks1bQ8BIZ1 1259 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 DymQ8CHY3 669 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Card14Q99KF0 999 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Krt84Q99M73 603 aa12.33□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Acad12D3Z7X0 555 aa12.32□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Sdc2P43407 202 aa12.32□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Znf653Q6YND2 615 aa12.32□□□□□ -0.44
Rnf40-206ENSMUST00000206914 AbraQ8BUZ1 375 aa12.32□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Hgh1Q8C3I8 393 aa12.32□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Desi2Q9D291 194 aa12.32□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Hip1rQ9JKY5 1068 aa12.32□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Vstm4T1NXB5 319 aa12.32□□□□□ -0.44
Rnf40-206ENSMUST00000206914 Rad23aP54726 363 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 105.3 ms