RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Cdcp1Q5U462 833 aa14.79□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 Edrf1Q6GQV7 1239 aa14.79□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 Tex2Q6ZPJ0 1128 aaKnown RBP14.79□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 FanclQ9CR14 375 aa14.79□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 Sept12Q9D451 317 aa14.79□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 Mbd3Q9Z2D8 285 aaKnown RBP14.79□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 Fndc3c1Q6DFV6 1356 aa14.78□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 Aox3G3X982 1335 aa14.78□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 Bace1P56818 501 aa14.78□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 Hspa8P63017 646 aaKnown RBP14.78□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 WasP70315 520 aa14.78□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 SfswapQ3USH5 945 aaKnown RBP14.78□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 Cfap69Q8BH53 942 aa14.78□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 Phf20Q8BLG0 1010 aaKnown RBP14.78□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 Stac3Q8BZ71 360 aa14.78□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 Il31raQ8K5B1 716 aa14.78□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 MthfsQ9D110 203 aa14.78□□□□□ -0.04
Ccdc28a-202ENSMUST00000080860 Slc27a3O88561 667 aa14.77□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Rpusd2Q149F1 553 aa14.77□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Hs1bp3Q3TC93 395 aa14.77□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Kansl1lQ5DTI6 991 aa14.77□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Aldh8a1Q8BH00 487 aa14.77□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Trmt2aQ8BNV1 574 aaKnown RBP14.77□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Sulf1Q8K007 870 aa14.77□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Rnf181Q9CY62 165 aa14.77□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Bcs1lQ9CZP5 418 aa14.77□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Tmod2Q9JKK7 351 aa14.77□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Lamb1P02469 1786 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Clrn2B2RVW2 232 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Usp17ldG5E8G2 545 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Usp17lcG5E8I7 545 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Vcam1P29533 739 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Mmp20P57748 482 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Tbc1d9bQ5SVR0 1263 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Rasa3Q60790 834 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Cyp24a1Q64441 514 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 GnptabQ69ZN6 1235 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Tmc4Q7TQ65 694 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Tbc1d23Q8K0F1 684 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 C1qtnf12Q8R2Z0 308 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Ppp4r3bQ922R5 820 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Pcgf6Q99NA9 353 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Mei1Q9D4I2 1268 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 CarsQ9ER72 831 aaKnown RBP14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Zbtb12Q9Z150 459 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Myh2G3UW82 1942 aa14.76□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Fam205a1D3YZF6 1314 aa14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Usp31E9Q6Y8 1344 aa14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Plcg1Q62077 1302 aa14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Krt24A1L317 512 aa14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Skint7A7XV04 395 aa14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Traf5P70191 558 aa14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Cyp4f37Q3V1F1 546 aa14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Zbtb45Q52KG4 520 aa14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Slc9c1Q6UJY2 1175 aa14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Olfm5Q8BU90 496 aa14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Ero1bQ8R2E9 467 aa14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Snapc2Q91XA5 359 aa14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Smarca5Q91ZW3 1051 aaKnown RBP14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Xrcc4Q924T3 326 aa14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Tjap1Q9DCD5 539 aa14.75□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Rbbp8nlA2ABX0 614 aa14.74□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Frmd7A2AD83 703 aa14.74□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 LifrP42703 1092 aa14.74□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Tfcp2l1Q3UNW5 479 aa14.74□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Adck5Q80V03 582 aa14.74□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Stn1Q8K2X3 378 aa14.74□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Snap47Q8R570 413 aa14.74□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 MsraQ9D6Y7 233 aa14.74□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Sept14Q9DA97 430 aa14.74□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 IcoslgQ9JHJ8 322 aa14.74□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Arih1Q9Z1K5 555 aa14.74□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Btbd19S4R1I0 287 aa14.74□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Ep400Q8CHI8 3072 aaKnown RBP14.73□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Has3O08650 554 aa14.73□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Mmp10O55123 476 aa14.73□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Nol8Q3UHX0 1147 aaKnown RBP14.73□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Garem2Q6PAJ3 880 aa14.73□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Golim4Q8BXA1 655 aa14.73□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 PaoxQ8C0L6 504 aa14.73□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Rtp1Q8C8C1 263 aa14.73□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Atxn7Q8R4I1 867 aa14.73□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 RabggtaQ9JHK4 567 aa14.73□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Atoh1P48985 351 aa14.72□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Ltv1Q6NSQ7 470 aaKnown RBP14.72□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Gimap3Q99MI6 301 aa14.72□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Gm42715A0A087WP63 3095 aaKnown RBP14.72□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Prkg1P0C605 671 aa14.71□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Zfp953Q3UPV7 304 aa14.71□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Mansc4Q3UU94 337 aa14.71□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Rhot2Q8JZN7 620 aa14.71□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Bmp2kQ91Z96 1138 aa14.71□□□□□ -0.05
Ccdc28a-202ENSMUST00000080860 Ltbp2O08999 1813 aa14.71□□□□□ -0.06
Ccdc28a-202ENSMUST00000080860 Btn2a2A4QPC6 514 aa14.7□□□□□ -0.06
Ccdc28a-202ENSMUST00000080860 Ces1aE9PYP1 563 aa14.7□□□□□ -0.06
Ccdc28a-202ENSMUST00000080860 FlgP11088 336 aa14.7□□□□□ -0.06
Ccdc28a-202ENSMUST00000080860 Cyp2d9P11714 504 aa14.7□□□□□ -0.06
Ccdc28a-202ENSMUST00000080860 Cbx2P30658 519 aa14.7□□□□□ -0.06
Ccdc28a-202ENSMUST00000080860 Acsl1P41216 699 aa14.7□□□□□ -0.06
Ccdc28a-202ENSMUST00000080860 Irf5P56477 497 aa14.7□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms