RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Gm43638A0A0J9YU36 694 aa10.66□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 CltaO08585 235 aa10.66□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Bend4P86174 541 aa10.66□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Smarcc1P97496 1104 aa10.66□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Vps37dQ810I0 261 aa10.66□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Emilin2Q8K482 1074 aa10.66□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Cnpy3Q9DAU1 276 aa10.66□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Dhx40Q6PE54 779 aaKnown RBP10.66□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Fsd2Q8BZ52 692 aa10.66□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Pcdhb15Q91Y04 786 aa10.66□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 NgdnQ9DB96 315 aaKnown RBP10.66□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Zbtb7aO88939 569 aaKnown RBP10.65□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Cypt2Q6P924 180 aa10.65□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Frmpd3A0A140LIW3 1774 aa10.65□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Atp8b5A3FIN4 1183 aa10.65□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Hvcn1Q3U2S8 269 aa10.65□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Casc1Q6TDU8 730 aa10.65□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Rassf8Q8CJ96 419 aa10.65□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 HmcesQ8R1M0 353 aaKnown RBP10.65□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Iffo2Q8R2V2 512 aa10.65□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Odf2lQ9D478 642 aa10.65□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 TnmdQ9EP64 317 aa10.65□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Cdk4P30285 303 aa10.65□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Spata5Q3UMC0 893 aaKnown RBP10.65□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Pold4Q9CWP8 107 aa10.65□□□□□ -0.7
Ctnna1-201ENSMUST00000042345 Tuft1O08970 390 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Il15P48346 162 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 CgnP59242 1191 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Prdm1Q60636 856 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Pcsk7Q61139 770 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Rbm15bQ6PHZ5 887 aaKnown RBP10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Glis3Q6XP49 780 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Olfr118Q7TRJ6 321 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Terb1Q8C0V1 768 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Ints4Q8CIM8 964 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Krt84Q99M73 603 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Mapk8ip1Q9WVI9 707 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Adamtsl1Q8BLI0 1745 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Filip1Q9CS72 1211 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Ambra1A2AH22 1300 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Metap2O08663 478 aaKnown RBP10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Kif3aP28741 701 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Kcnd1Q03719 651 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Pram1Q6BCL1 675 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Rrp9Q91WM3 475 aaKnown RBP10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Popdc2Q9ES82 367 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Eif4enif1Q9EST3 983 aaKnown RBP10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Snapc4Q8BP86 1333 aa10.64□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Izumo3A6PWV3 263 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Vsig10D3YX43 558 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Sema6bO54951 886 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Pde11aP0C1Q2 933 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 EzrP26040 586 aaKnown RBP10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Fxr1Q61584 677 aaKnown RBP10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Cyp24a1Q64441 514 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Slc5a4bQ91ZP4 660 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Tlcd1Q99JT6 247 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Arhgef16Q3U5C8 713 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Rrp12Q6P5B0 1295 aaKnown RBP10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Pcdhb14Q6PB90 796 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 AllcQ9JHX6 414 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Mmel1Q9JLI3 765 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Slc7a3P70423 618 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Cdkl5Q3UTQ8 938 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Gzf1Q4VBD9 706 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Sec62Q8BU14 398 aaKnown RBP10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Lmod1Q8BVA4 595 aa10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Nop2Q922K7 793 aaKnown RBP10.63□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Ppfibp2O35711 882 aa10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Ctr9Q62018 1173 aaKnown RBP10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Ppp2r5bQ6PD28 497 aa10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Srp68Q8BMA6 625 aaKnown RBP10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 HlfQ8BW74 295 aa10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Eno4Q8C042 619 aa10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Golph3lQ8R088 285 aaKnown RBP10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 MypopQ8R4U1 393 aa10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Sil1Q9EPK6 465 aa10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Slc4a4O88343 1079 aa10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 NapbP28663 298 aa10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Atp1a3Q6PIC6 1013 aa10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Zcrb1Q9CZ96 217 aaKnown RBP10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Suclg2Q9Z2I8 433 aa10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Hps3Q91VB4 1002 aa10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Adarb2Q9JI20 745 aa10.62□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Myh8P13542 1937 aa10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Cfap99A0A140LIX9 648 aa10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 A0A1W2P7S8 802 aa10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Bicdl1A0JNT9 577 aa10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 UncxO08934 530 aa10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Celf1P28659 486 aaKnown RBP10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 XpcP51612 930 aa10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Sptlc2P97363 560 aaKnown RBP10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Cdc5lQ6A068 802 aaKnown RBP10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Atxn2lQ7TQH0 1049 aaKnown RBP10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 IqcgQ80W32 419 aa10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Dnaaf2Q8BPI1 814 aa10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Tbc1d7Q9D0K0 293 aa10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Tob2Q9JM55 345 aa10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Mctp1E9PV86 951 aa10.61□□□□□ -0.71
Ctnna1-201ENSMUST00000042345 Rps8P62242 208 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms