RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 PtprtQ99M80 1454 aa12.86□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Tex13c2A0A0G2JGA3 530 aa12.86□□□□□ -0.35
Topbp1-201ENSMUST00000035164 IqcgQ80W32 419 aa12.86□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Alg3Q8K2A8 438 aa12.86□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Efcab2Q9CQ46 164 aa12.86□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Cep89Q9CZX2 791 aa12.86□□□□□ -0.35
Topbp1-201ENSMUST00000035164 4930407I10RikD3Z5T8 1512 aa12.86□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Lipo1J3QME6 396 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Ppp4r3aQ6P2K6 820 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Tacc1Q6Y685 774 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Pcdhgc5Q91XW9 944 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Vstm4T1NXB5 319 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 IghaA0A0A6YXW6 389 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Lmbr1Q9JIT0 490 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Tcp11l2Q8K1H7 517 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Hap1O35668 628 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Pla2g4bP0C871 782 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Hgh1Q8C3I8 393 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Nod2Q8K3Z0 1020 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Pet2A2AHY8 747 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 NfkbibQ60778 359 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Ccdc148Q6P5U8 527 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 NapgQ9CWZ7 312 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Sf3a3Q9D554 501 aaKnown RBP12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Pde3aQ9Z0X4 1141 aa12.85□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Eif3j1Q3UGC7 261 aaKnown RBP12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Ppp1r7Q3UM45 361 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Eif3j2Q66JS6 263 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Bola3Q8CEI1 110 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Wasf1Q8R5H6 559 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Lonrf3Q9D4H7 753 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Xrn1P97789 1719 aaKnown RBP12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Abca8bQ8K440 1620 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Rad23aP54726 363 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Zkscan8Q8BSL0 588 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 WtapQ9ER69 396 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Znf541Q0GGX2 1363 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Bin2D3Z6Q9 489 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 LbrQ3U9G9 626 aaKnown RBP12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Gngt1Q61012 74 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Hpcal4Q8BGZ1 191 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 NhsB1AV60 1647 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Skap2Q3UND0 358 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 PsdQ5DTT2 1024 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Eif3bQ8JZQ9 803 aaKnown RBP12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Rtn1Q8K0T0 780 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Dydc1Q9D9T0 175 aa12.84□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Pde4bB1AWC9 736 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Gpt2Q8BGT5 522 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Cdc23Q8BGZ4 597 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 4930572O03RikQ8C5Y0 211 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Appbp2Q9DAX9 585 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 ChkbO55229 394 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Tmem109Q3UBX0 243 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Jade2Q6ZQF7 829 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Pip4k2bQ80XI4 416 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Rgs12Q8CGE9 1381 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Mdc1Q5PSV9 1707 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 DnmbpQ6TXD4 1580 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Otud7bB2RUR8 840 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Stx8O88983 236 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 SsbP32067 415 aaKnown RBP12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Haus7Q8BKT8 364 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Fam53cQ8BXQ8 393 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 SnrkQ8VDU5 748 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 PpanQ91YU8 470 aaKnown RBP12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Syde2E9PUP1 1314 aa12.83□□□□□ -0.36
Topbp1-201ENSMUST00000035164 PtpruB1AUH1 1446 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Knl1Q66JQ7 1612 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Cyp2d34L7N463 504 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Ap1g2O88512 791 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Mdh1P14152 334 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Pde5aQ8CG03 865 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Usp49Q6P9L4 685 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Mtmr6Q8VE11 617 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Pcdha7Q91Y13 937 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Gps2Q921N8 327 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Dctpp1Q9QY93 170 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Cyp26c1B2RXA7 518 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Dnajc21E9Q8D0 531 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Akr1c19G3X9Y6 323 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Cyp2d10P24456 504 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Nkx2-3P97334 362 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Ica1lQ3TY65 431 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 MycbpapQ5SUV2 932 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Pcdhb14Q6PB90 796 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Ftsj3Q9DBE9 838 aaKnown RBP12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Cnbd1B1AWM0 430 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 TsksO54887 585 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Fam213aQ9CYH2 218 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Dpf1Q9QX66 387 aa12.82□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Ccdc24E9PUW8 296 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Ncapg2Q6DFV1 1138 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Rad17Q6NXW6 688 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Wdr64Q9D565 1086 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Suclg2Q9Z2I8 433 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Hecw2Q6I6G8 1578 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 InsrrQ9WTL4 1300 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Lrriq3Q14DL3 633 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Ddx17Q501J6 650 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms