RNA–Protein interactions for RNA: ENSMUST00000023206.13

Ercc4-201, Transcript of DNA repair endonuclease XPF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc4, Length 3,480 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4-201ENSMUST00000023206 CrklP47941 303 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 VeztQ3ZK22 780 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Cep55Q8BT07 462 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Ppm1mQ8BU27 406 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Kif2bQ8C0N1 668 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Ppfibp1Q8C8U0 969 aaKnown RBP13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Syde2E9PUP1 1314 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Med1Q925J9 1575 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Abl1P00520 1123 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Dnm1P39053 867 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Vsnl1P62761 191 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Capza3P70190 299 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Nlrp9bQ66X22 1003 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Hip1rQ9JKY5 1068 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Acot9Q9R0X4 439 aaKnown RBP13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Sparcl1P70663 650 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Cdc37Q61081 379 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Krt25Q8VCW2 446 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Tab2Q99K90 693 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 MypnQ5DTJ9 1315 aa13.7□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Pde6bP23440 856 aa13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Zrsr2Q62377 462 aaKnown RBP13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Agtpbp1Q641K1 1218 aa13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Fhod1Q6P9Q4 1197 aa13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Smc4Q8CG47 1286 aa13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Tmem119Q8R138 280 aa13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Tcof1O08784 1320 aaKnown RBP13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Cyp2d34L7N463 504 aa13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Sptlc2P97363 560 aaKnown RBP13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Gja3Q64448 417 aa13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Mtmr6Q8VE11 617 aa13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 SetQ9EQU5 289 aaKnown RBP13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Grin2dQ03391 1323 aa13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Kdm6aO70546 1401 aa13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Kctd19Q562E2 927 aa13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 TxlnaQ6PAM1 554 aaKnown RBP13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Ripor2Q80U16 1078 aa13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Tubb6Q922F4 447 aa13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Ppp4r3bQ922R5 820 aa13.69□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Wdr17E9Q271 1322 aa13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Klhl34A2AI76 644 aa13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Vmn2r23E9PXI5 849 aa13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Mdh1P14152 334 aa13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Pfkfb1P70266 471 aa13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Ano8Q6PB70 1060 aa13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 GphnQ8BUV3 769 aaKnown RBP13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Alg3Q8K2A8 438 aa13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 PpanQ91YU8 470 aaKnown RBP13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Prl3d3A0A0M6L0J6 224 aa13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Rnf40Q3U319 1001 aa13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Ctr9Q62018 1173 aaKnown RBP13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Nek5Q7TSC3 627 aa13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 MbipQ99LQ1 341 aa13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 TnksQ6PFX9 1320 aa13.68□□□□□ -0.22
Ercc4-201ENSMUST00000023206 C2cd2E9Q3C1 696 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Ccdc121E9Q6D3 323 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Hoxa7P02830 229 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Cep112Q5PR68 954 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Cnot6lQ8VEG6 555 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Farp2Q91VS8 1065 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 BrapQ99MP8 591 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Cwc25Q9DBF7 416 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Iqsec3Q3TES0 1195 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Acap3Q6NXL5 833 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Clic6Q8BHB9 596 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Cd209bQ8CJ91 325 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Flad1Q8R123 492 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Srgap2Q91Z67 1071 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Tnip1Q9WUU8 647 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Gsdma2Q32M21 443 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Ankle2Q6P1H6 964 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Usp44Q8C2S0 711 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Q8VDP2 222 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 PdhbQ9D051 359 aa13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 N4bp2F8VQG7 1678 aaKnown RBP13.67□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Gcom1E9PZ54 550 aa13.66□□□□□ -0.22
Ercc4-201ENSMUST00000023206 MyzapQ3UIJ9 466 aa13.66□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Srek1Q8BZX4 494 aaKnown RBP13.66□□□□□ -0.22
Ercc4-201ENSMUST00000023206 CenphQ9QYM8 241 aa13.66□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Cdc45Q9Z1X9 566 aa13.66□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Atp10bB1AWN4 1474 aa13.66□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Rgs9O54828 675 aa13.66□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Bbof1Q3V079 533 aa13.66□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Pip4k2bQ80XI4 416 aa13.66□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Synpo2Q91YE8 1087 aaKnown RBP13.66□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Vps16Q920Q4 839 aa13.66□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Klra4Q60651 263 aa13.66□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Lrrc1Q80VQ1 524 aa13.66□□□□□ -0.22
Ercc4-201ENSMUST00000023206 4930519G04RikQ9CPT7 205 aa13.66□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Abcf1Q6P542 837 aaKnown RBP13.65□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Ctdspl2Q8BG15 465 aa13.65□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Dpf1Q9QX66 387 aa13.65□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Col16a1Q8BLX7 1580 aa13.65□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Pde4bB1AWC9 736 aa13.65□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Prpf38aQ4FK66 312 aaKnown RBP13.65□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Brd3Q8K2F0 726 aaKnown RBP13.65□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Tubgcp2Q921G8 905 aa13.65□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Tet3Q8BG87 1668 aa13.65□□□□□ -0.22
Ercc4-201ENSMUST00000023206 Tpm3-rs7D3Z2H9 248 aa13.65□□□□□ -0.23
Ercc4-201ENSMUST00000023206 Washc4Q3UMB9 1173 aa13.65□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms