RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Ctdspl2Q8BG15 465 aa14.49□□□□□ -0.09
Clcn3-201ENSMUST00000004430 StrbpQ91WM1 672 aaKnown RBP14.49□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Tfcp2Q9ERA0 502 aa14.49□□□□□ -0.09
Clcn3-201ENSMUST00000004430 ChmQ9QXG2 665 aa14.49□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Wdr17E9Q271 1322 aa14.49□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Tbc1d8bA3KGB4 1114 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Bin2D3Z6Q9 489 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Pip4k2aO70172 405 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Hdhd2Q3UGR5 259 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 MycbpapQ5SUV2 932 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Ncaph2Q8BSP2 607 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Rtn1Q8K0T0 780 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Brms1Q99N20 246 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Ssr1Q9CY50 286 aaKnown RBP14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Golga5Q9QYE6 729 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Msh6P54276 1358 aaKnown RBP14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Krt39Q6IFX4 482 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Trim56Q80VI1 734 aaKnown RBP14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 ChkbO55229 394 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Ccdc148Q6P5U8 527 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Zkscan8Q8BSL0 588 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Kif2bQ8C0N1 668 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Fam213aQ9CYH2 218 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Dusp10Q9ESS0 483 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Tmem2Q5FWI3 1383 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Map2P20357 1828 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 CoblQ5NBX1 1337 aaKnown RBP14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Eya2O08575 532 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Abtb2Q7TQI7 1024 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Tcp11l1Q8BTG3 509 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Stac3Q8BZ71 360 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 NgdnQ9DB96 315 aaKnown RBP14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Rapgef4Q9EQZ6 1011 aa14.48□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Kdm6aO70546 1401 aa14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Tns3Q5SSZ5 1440 aa14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Zfp597E9Q6S0 419 aa14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Enc1O35709 589 aa14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 E4f1Q8CCE9 783 aa14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Sf3a3Q9D554 501 aaKnown RBP14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Uchl5Q9WUP7 329 aa14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 D430041D05RikF6ZGR6 1678 aa14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 LtkP08923 888 aa14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Trap1aP19473 224 aa14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 EmbP21995 330 aa14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Ube2oQ6ZPJ3 1288 aa14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Fam160b2Q80YR2 744 aa14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Sec62Q8BU14 398 aaKnown RBP14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Homer1Q9Z2Y3 366 aa14.47□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Ubr1O70481 1757 aa14.46□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Ranbp6Q8BIV3 1105 aa14.46□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Commd10Q8JZY2 202 aa14.46□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Api5O35841 504 aaKnown RBP14.46□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Ms4a1P19437 291 aa14.46□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Ccdc129Q14B48 1034 aa14.46□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Als2cr12Q8BVM7 383 aa14.46□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Farp2Q91VS8 1065 aa14.46□□□□□ -0.09
Clcn3-201ENSMUST00000004430 Slit2Q9R1B9 1521 aa14.46□□□□□ -0.09
Clcn3-201ENSMUST00000004430 NalcnQ8BXR5 1738 aa14.46□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Pde11aP0C1Q2 933 aa14.46□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Cyp2d11P24457 504 aa14.46□□□□□ -0.1
Clcn3-201ENSMUST00000004430 NsmfQ99NF2 532 aa14.46□□□□□ -0.1
Clcn3-201ENSMUST00000004430 IqcgQ80W32 419 aa14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Ncoa5Q91W39 579 aaKnown RBP14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Pdzd9Q9D9M4 266 aa14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Abcc4E9Q236 1325 aa14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 AceP09470 1312 aa14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Ncoa7Q6DFV7 943 aa14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Add2Q9QYB8 725 aa14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Otud7bB2RUR8 840 aa14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Cyp26a1O55127 497 aa14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Rtel1Q0VGM9 1203 aa14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Epc1Q8C9X6 813 aa14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Slain2Q8CI08 581 aa14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Tubb4aQ9D6F9 444 aa14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Knop1Q9Z2Q2 478 aaKnown RBP14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Adgrb1Q3UHD1 1582 aa14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 C5P06684 1680 aa14.45□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Rsph10bE9PYQ0 876 aa14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Scaf1Q5U4C3 1256 aaKnown RBP14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Nod2Q8K3Z0 1020 aa14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Yeats4Q9CR11 227 aaKnown RBP14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Naa16Q9DBB4 864 aa14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Cct5P80316 541 aaKnown RBP14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Ddx17Q501J6 650 aaKnown RBP14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Igbp1Q61249 340 aa14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Cfap100Q80VN0 613 aa14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Erlin1Q91X78 346 aa14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Rims2Q9EQZ7 1530 aa14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Plekhd1B2RPU2 505 aa14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Cct6aP80317 531 aaKnown RBP14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Tbc1d5Q80XQ2 815 aa14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Nek9Q8K1R7 984 aa14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 SsbP32067 415 aaKnown RBP14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Kcnq3Q8K3F6 873 aa14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Mon2Q80TL7 1715 aa14.44□□□□□ -0.1
Clcn3-201ENSMUST00000004430 XpcP51612 930 aa14.43□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Rnf41Q8BH75 317 aa14.43□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Gucy1b3O54865 620 aa14.43□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Ccnl1Q52KE7 532 aaKnown RBP14.43□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Dennd3A2RT67 1274 aa14.43□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 51.9 ms