RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 FOXA1P55317 472 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 KRTAP10-3P60369 221 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 GRK1Q15835 563 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 AMTNQ6UX39 209 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 TMEM86AQ8N2M4 240 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 CT55Q8WUE5 264 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 ZHX1-C8orf76Q96EF9 292 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 EFCAB11Q9BUY7 163 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 EIF5A2Q9GZV4 153 aaKnown RBP0.77□□□□□ -2.29
KNL1-203ENST00000526913 MED11Q9P086 117 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 ZBED9Q6R2W3 1325 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 CEP162Q5TB80 1403 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 HEATR5BQ9P2D3 2071 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 COL2A1P02458 1487 aaPredicted RBP0.77□□□□□ -2.29
KNL1-203ENST00000526913 DPRXA6NFQ7 191 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 SDHAF1A6NFY7 115 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 OR2T1O43869 369 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 S100GP29377 79 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 BLVRBP30043 206 aaPredicted RBP0.77□□□□□ -2.29
KNL1-203ENST00000526913 SDC4P31431 198 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 RAB13P51153 203 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 LINC01554Q52M75 96 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 Q8NDZ9 215 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 MCFD2Q8NI22 146 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 BORCS7Q96B45 105 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 BORCS8Q96FH0 119 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 GPX7Q96SL4 187 aaPredicted RBP0.77□□□□□ -2.29
KNL1-203ENST00000526913 LAMB4A4D0S4 1761 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 MBD5Q9P267 1494 aa0.77□□□□□ -2.29
KNL1-203ENST00000526913 NOTCH2Q04721 2471 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 A0A1W2PNM2 257 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 ZNF728P0DKX0 622 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 LY6EQ16553 131 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 SOSTDC1Q6X4U4 206 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 SH2D6Q7Z4S9 175 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 OR4E2Q8NGC2 313 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 DNAJC9Q8WXX5 260 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 IMMP2LQ96T52 175 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 C19orf12Q9NSK7 152 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 GINS2Q9Y248 185 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 CCDC88CQ9P219 2028 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 PRDM15P57071 1507 aaPredicted RBP0.76□□□□□ -2.29
KNL1-203ENST00000526913 PIK3C2BO00750 1634 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 FER1L6Q2WGJ9 1857 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 A0A1W2PNN7 141 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 ZNF98A6NK75 572 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 A8MWP6 167 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 C3orf84H3BNL1 204 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 K7ERS5 55 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 M0R129 80 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 PIRO00625 290 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 SCO1O75880 301 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 MT-ND4LP03901 98 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 DNAH10OSP0CZ25 163 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 NPPCP23582 126 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 PHBP35232 272 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 MEF2BQ02080 365 aaPredicted RBP0.76□□□□□ -2.29
KNL1-203ENST00000526913 TMEM128Q5BJH2 165 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 FKBP1CQ5VVH2 108 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 RTN4IP1Q8WWV3 396 aaPredicted RBP0.76□□□□□ -2.29
KNL1-203ENST00000526913 BTF3L4Q96K17 158 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 OR52E6Q96RD3 313 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 TMEM133Q9H2Q1 129 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 ZNF532Q9HCE3 1301 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 HFM1A2PYH4 1435 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 TECPR2O15040 1411 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 URB2Q14146 1524 aaKnown RBP0.76□□□□□ -2.29
KNL1-203ENST00000526913 TJP1Q07157 1748 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 SLX4Q8IY92 1834 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 DNAH8Q96JB1 4490 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 NBEAL1Q6ZS30 2694 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 CHD9Q3L8U1 2897 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 IGLV3-9A0A075B6K5 115 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 A0A1B0GV90 55 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 A0A1W2PQD3 144 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 M0QZK8 103 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 TAX1BP3O14907 124 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 NDUFA2O43678 99 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 PRM2P04554 102 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 RNASE4P34096 147 aaKnown RBP0.76□□□□□ -2.29
KNL1-203ENST00000526913 CSN1S1P47710 185 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 RPS11P62280 158 aaKnown RBP eCLIP0.76□□□□□ -2.29
KNL1-203ENST00000526913 LCN6P62502 163 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 EBPQ15125 230 aaKnown RBP0.76□□□□□ -2.29
KNL1-203ENST00000526913 PLPPR5Q32ZL2 321 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 CCDC153Q494R4 210 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 DHFR2Q86XF0 187 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 OR13C6PQ8NH95 151 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 PRTFDC1Q9NRG1 225 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 JPT1Q9UK76 154 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 KLK12Q9UKR0 248 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 HSPE1-MOB4S4R3N1 261 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 PLIN4Q96Q06 1357 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 NWD2Q9ULI1 1742 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 LTN1O94822 1766 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 OBSL1O75147 1896 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 ABCA12Q86UK0 2595 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 USP32Q8NFA0 1604 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 DNAH2Q9P225 4427 aa0.76□□□□□ -2.29
KNL1-203ENST00000526913 TRBV24-1A0A075B6N3 115 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms