RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 AEBP2Q6ZN18 517 aaPredicted RBP4.73□□□□□ -1.65
KNL1-203ENST00000526913 CHIC1Q5VXU3 224 aa4.67□□□□□ -1.66
KNL1-203ENST00000526913 PHF23Q9BUL5 403 aaPredicted RBP4.3□□□□□ -1.72
KNL1-203ENST00000526913 SENP3Q9H4L4 574 aaPredicted RBP3.91□□□□□ -1.78
KNL1-203ENST00000526913 POTEDQ86YR6 584 aa3.89□□□□□ -1.79
KNL1-203ENST00000526913 EHMT2Q96KQ7 1210 aa3.88□□□□□ -1.79
KNL1-203ENST00000526913 ADRA2BP18089 450 aa3.86□□□□□ -1.79
KNL1-203ENST00000526913 PLPPR3Q6T4P5 718 aa3.83□□□□□ -1.8
KNL1-203ENST00000526913 KCNA4P22459 653 aa3.81□□□□□ -1.8
KNL1-203ENST00000526913 PPP6R1Q9UPN7 881 aa3.76□□□□□ -1.81
KNL1-203ENST00000526913 CSRNP3Q8WYN3 585 aa3.7□□□□□ -1.82
KNL1-203ENST00000526913 FOXD1Q16676 465 aa3.61□□□□□ -1.83
KNL1-203ENST00000526913 ZBTB22O15209 634 aa3.61□□□□□ -1.83
KNL1-203ENST00000526913 DNAJC5BQ9UF47 199 aa3.57□□□□□ -1.84
KNL1-203ENST00000526913 SLC4A1APQ9BWU0 796 aaKnown RBP3.54□□□□□ -1.84
KNL1-203ENST00000526913 RTN4Q9NQC3 1192 aaKnown RBP3.53□□□□□ -1.84
KNL1-203ENST00000526913 SLC24A1O60721 1099 aa3.5□□□□□ -1.85
KNL1-203ENST00000526913 KRTAP17-1Q9BYP8 105 aa3.5□□□□□ -1.85
KNL1-203ENST00000526913 PPP4R3CPQ6ZMV5 832 aa3.48□□□□□ -1.85
KNL1-203ENST00000526913 NPM3O75607 178 aaKnown RBP3.47□□□□□ -1.85
KNL1-203ENST00000526913 PIAS4Q8N2W9 510 aaPredicted RBP3.38□□□□□ -1.87
KNL1-203ENST00000526913 MSH5O43196 834 aa3.35□□□□□ -1.87
KNL1-203ENST00000526913 MAPK8IP2Q13387 824 aaPredicted RBP3.35□□□□□ -1.87
KNL1-203ENST00000526913 AMER1Q5JTC6 1135 aaPredicted RBP3.28□□□□□ -1.88
KNL1-203ENST00000526913 PRKCSHP14314 528 aaPredicted RBP3.28□□□□□ -1.88
KNL1-203ENST00000526913 NCBP3Q53F19 620 aaKnown RBP3.28□□□□□ -1.88
KNL1-203ENST00000526913 FOXD4L1Q9NU39 408 aa3.27□□□□□ -1.89
KNL1-203ENST00000526913 FKBP8Q14318 412 aa3.27□□□□□ -1.89
KNL1-203ENST00000526913 SLC4A2P04920 1241 aa3.27□□□□□ -1.89
KNL1-203ENST00000526913 CNKSR2Q8WXI2 1034 aa3.25□□□□□ -1.89
KNL1-203ENST00000526913 HOXD11P31277 338 aaPredicted RBP3.25□□□□□ -1.89
KNL1-203ENST00000526913 ATF5Q9Y2D1 282 aaPredicted RBP3.23□□□□□ -1.89
KNL1-203ENST00000526913 DMRT2Q9Y5R5 561 aa3.22□□□□□ -1.89
KNL1-203ENST00000526913 RNF216Q9NWF9 866 aaPredicted RBP3.21□□□□□ -1.9
KNL1-203ENST00000526913 SCAF1Q9H7N4 1312 aaKnown RBP3.14□□□□□ -1.91
KNL1-203ENST00000526913 FBLN2P98095 1184 aa3.12□□□□□ -1.91
KNL1-203ENST00000526913 PLCB2Q00722 1185 aa3.12□□□□□ -1.91
KNL1-203ENST00000526913 KDM2AQ9Y2K7 1162 aa3.11□□□□□ -1.91
KNL1-203ENST00000526913 TAOK2Q9UL54 1235 aa3.09□□□□□ -1.92
KNL1-203ENST00000526913 HAP1P54257 671 aaPredicted RBP3.09□□□□□ -1.92
KNL1-203ENST00000526913 IFNLR1Q8IU57 520 aaPredicted RBP3.07□□□□□ -1.92
KNL1-203ENST00000526913 MYCNP04198 464 aaPredicted RBP3.06□□□□□ -1.92
KNL1-203ENST00000526913 NPM1P06748 294 aaKnown RBP eCLIP3.06□□□□□ -1.92
KNL1-203ENST00000526913 TPRNQ4KMQ1 711 aa3.06□□□□□ -1.92
KNL1-203ENST00000526913 PKD2Q13563 968 aa3.06□□□□□ -1.92
KNL1-203ENST00000526913 TIMELESSQ9UNS1 1208 aa3.06□□□□□ -1.92
KNL1-203ENST00000526913 ATXN8OSP0DMR3 200 aa3.05□□□□□ -1.92
KNL1-203ENST00000526913 MKRN4PQ13434 485 aaPredicted RBP3.04□□□□□ -1.92
KNL1-203ENST00000526913 DCAF8L2P0C7V8 631 aa3.03□□□□□ -1.92
KNL1-203ENST00000526913 U3KPZ7 1027 aaPredicted RBP3.01□□□□□ -1.93
KNL1-203ENST00000526913 TULP1O00294 542 aaPredicted RBP2.99□□□□□ -1.93
KNL1-203ENST00000526913 VASPP50552 380 aaPredicted RBP2.99□□□□□ -1.93
KNL1-203ENST00000526913 TSHZ2Q9NRE2 1034 aa2.99□□□□□ -1.93
KNL1-203ENST00000526913 BCANQ96GW7 911 aa2.98□□□□□ -1.93
KNL1-203ENST00000526913 SPDYE4A6NLX3 237 aa2.97□□□□□ -1.93
KNL1-203ENST00000526913 RGL2O15211 777 aa2.96□□□□□ -1.93
KNL1-203ENST00000526913 PROM2Q8N271 834 aa2.96□□□□□ -1.93
KNL1-203ENST00000526913 PAXIP1Q6ZW49 1069 aaPredicted RBP2.96□□□□□ -1.94
KNL1-203ENST00000526913 CFAP44Q96MT7 982 aa2.96□□□□□ -1.94
KNL1-203ENST00000526913 DCAF8L1A6NGE4 600 aa2.95□□□□□ -1.94
KNL1-203ENST00000526913 ZNF219Q9P2Y4 722 aaPredicted RBP2.95□□□□□ -1.94
KNL1-203ENST00000526913 VSIG10Q8N0Z9 540 aa2.93□□□□□ -1.94
KNL1-203ENST00000526913 TRHP20396 242 aaPredicted RBP2.93□□□□□ -1.94
KNL1-203ENST00000526913 RNF39Q9H2S5 420 aa2.92□□□□□ -1.94
KNL1-203ENST00000526913 SPINK5Q9NQ38 1064 aaPredicted RBP2.92□□□□□ -1.94
KNL1-203ENST00000526913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.92□□□□□ -1.944e-7■■□□□ 14.2
KNL1-203ENST00000526913 RNF25Q96BH1 459 aaPredicted RBP2.89□□□□□ -1.95
KNL1-203ENST00000526913 NKX1-1Q15270 411 aaPredicted RBP2.89□□□□□ -1.95
KNL1-203ENST00000526913 ECM2O94769 699 aaPredicted RBP2.89□□□□□ -1.95
KNL1-203ENST00000526913 BBXQ8WY36 941 aaPredicted RBP2.87□□□□□ -1.95
KNL1-203ENST00000526913 GTF3C3Q9Y5Q9 886 aa2.87□□□□□ -1.95
KNL1-203ENST00000526913 FBXO3Q9UK99 471 aa2.87□□□□□ -1.95
KNL1-203ENST00000526913 POLA2Q14181 598 aa2.86□□□□□ -1.95
KNL1-203ENST00000526913 CHGAP10645 457 aaKnown RBP2.86□□□□□ -1.95
KNL1-203ENST00000526913 C1QBPQ07021 282 aaKnown RBP2.86□□□□□ -1.95
KNL1-203ENST00000526913 SAMD1Q6SPF0 538 aaPredicted RBP2.85□□□□□ -1.95
KNL1-203ENST00000526913 DNAJC5Q9H3Z4 198 aa2.85□□□□□ -1.95
KNL1-203ENST00000526913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.84□□□□□ -1.96
KNL1-203ENST00000526913 HNRNPUL2Q1KMD3 747 aaKnown RBP2.84□□□□□ -1.96
KNL1-203ENST00000526913 TMEM132AQ24JP5 1023 aa2.84□□□□□ -1.96
KNL1-203ENST00000526913 ABCB7O75027 752 aa2.83□□□□□ -1.96
KNL1-203ENST00000526913 SPRYD3Q8NCJ5 442 aa2.83□□□□□ -1.96
KNL1-203ENST00000526913 DAXXQ9UER7 740 aaPredicted RBP2.83□□□□□ -1.96
KNL1-203ENST00000526913 SUPT5HO00267 1087 aaKnown RBP2.82□□□□□ -1.96
KNL1-203ENST00000526913 KLHL34Q8N239 644 aa2.82□□□□□ -1.96
KNL1-203ENST00000526913 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.82□□□□□ -1.96
KNL1-203ENST00000526913 SPOCK2Q92563 424 aa2.81□□□□□ -1.96
KNL1-203ENST00000526913 TRIM41Q8WV44 630 aa2.81□□□□□ -1.96
KNL1-203ENST00000526913 CADPS2Q86UW7 1296 aa2.8□□□□□ -1.96
KNL1-203ENST00000526913 GTPBP6O43824 516 aaPredicted RBP2.8□□□□□ -1.96
KNL1-203ENST00000526913 APLP2Q06481 763 aa2.8□□□□□ -1.96
KNL1-203ENST00000526913 OSCARQ8IYS5 282 aa2.8□□□□□ -1.96
KNL1-203ENST00000526913 UBTFP17480 764 aaKnown RBP2.79□□□□□ -1.96
KNL1-203ENST00000526913 CIZ1Q9ULV3 898 aaPredicted RBP2.79□□□□□ -1.96
KNL1-203ENST00000526913 BRPF1P55201 1214 aaPredicted RBP2.78□□□□□ -1.96
KNL1-203ENST00000526913 NBR1Q14596 966 aa2.78□□□□□ -1.96
KNL1-203ENST00000526913 ARXQ96QS3 562 aa2.78□□□□□ -1.96
KNL1-203ENST00000526913 KCNV2Q8TDN2 545 aa2.77□□□□□ -1.97
KNL1-203ENST00000526913 HS6ST3Q8IZP7 471 aa2.76□□□□□ -1.97
KNL1-203ENST00000526913 C14orf37Q86TY3 774 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms