RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 Q6ZQT7 251 aa11.04□□□□□ -0.64
LMBR1-201ENST00000353442 F2Z2F3 143 aa11.03□□□□□ -0.64
LMBR1-201ENST00000353442 SH2D1AO60880 128 aa11.03□□□□□ -0.64
LMBR1-201ENST00000353442 SMIM10L1P0DMW3 83 aa11.03□□□□□ -0.64
LMBR1-201ENST00000353442 Q5BKY6 102 aa11.03□□□□□ -0.64
LMBR1-201ENST00000353442 NABP1Q96AH0 204 aa11.03□□□□□ -0.64
LMBR1-201ENST00000353442 SMIM10Q96HG1 83 aa11.03□□□□□ -0.64
LMBR1-201ENST00000353442 SERF1AO75920 110 aa11.03□□□□□ -0.64
LMBR1-201ENST00000353442 WBP1Q96G27 269 aa11.03□□□□□ -0.64
LMBR1-201ENST00000353442 TRBV25-1A0A075B6N4 114 aa11.03□□□□□ -0.64
LMBR1-201ENST00000353442 IFITM3Q01628 133 aa11.03□□□□□ -0.64
LMBR1-201ENST00000353442 SCRT2Q9NQ03 307 aa11.03□□□□□ -0.64
LMBR1-201ENST00000353442 NMBP08949 121 aa11.03□□□□□ -0.64
LMBR1-201ENST00000353442 NHSQ6T4R5 1651 aa11.02□□□□□ -0.64
LMBR1-201ENST00000353442 DOCK5Q9H7D0 1870 aa11.02□□□□□ -0.64
LMBR1-201ENST00000353442 ZNF138P52744 262 aa11.02□□□□□ -0.64
LMBR1-201ENST00000353442 SPATA31B1PQ5VZV4 182 aa11.02□□□□□ -0.64
LMBR1-201ENST00000353442 ZNF497Q6ZNH5 498 aa11.02□□□□□ -0.64
LMBR1-201ENST00000353442 IFI27L1Q96BM0 104 aa11.02□□□□□ -0.65
LMBR1-201ENST00000353442 TDRD15B5MCY1 1934 aaKnown RBP11.02□□□□□ -0.65
LMBR1-201ENST00000353442 ZNF319Q9P2F9 582 aa11.02□□□□□ -0.65
LMBR1-201ENST00000353442 ESPL1Q14674 2120 aa11.02□□□□□ -0.65
LMBR1-201ENST00000353442 TIMM21Q9BVV7 248 aa11.02□□□□□ -0.65
LMBR1-201ENST00000353442 LAMA4Q16363 1823 aa11.02□□□□□ -0.65
LMBR1-201ENST00000353442 PCP4P48539 62 aa11.02□□□□□ -0.65
LMBR1-201ENST00000353442 GZMMP51124 257 aa11.01□□□□□ -0.65
LMBR1-201ENST00000353442 TRBV5-3A0A0A0MS03 114 aa11.01□□□□□ -0.65
LMBR1-201ENST00000353442 HAMPP81172 84 aa11.01□□□□□ -0.65
LMBR1-201ENST00000353442 AHCTF1Q8WYP5 2266 aa11.01□□□□□ -0.65
LMBR1-201ENST00000353442 TCTEX1D4Q5JR98 221 aa11.01□□□□□ -0.65
LMBR1-201ENST00000353442 LTBP4Q8N2S1 1624 aa11.01□□□□□ -0.65
LMBR1-201ENST00000353442 IGHV4-28A0A0C4DH34 117 aa11.01□□□□□ -0.65
LMBR1-201ENST00000353442 BUB1B-PAK6H3BSN5 160 aa11.01□□□□□ -0.65
LMBR1-201ENST00000353442 IGHG3P01860 377 aa11.01□□□□□ -0.65
LMBR1-201ENST00000353442 SUPT4H1P63272 117 aaKnown RBP11□□□□□ -0.65
LMBR1-201ENST00000353442 C5orf47Q569G3 176 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 PLEKHB2Q96CS7 222 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 CHKB-CPT1BH3BT56 60 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 MINOS1Q5TGZ0 78 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 ZNRF2Q8NHG8 242 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 MINOS1-NBL1R4GNA1 71 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 VCYO14598 125 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 ZNF479Q96JC4 524 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 DNAJC30Q96LL9 226 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 MYMXA0A1B0GTQ4 84 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 PAQR4Q8N4S7 273 aaPredicted RBP11□□□□□ -0.65
LMBR1-201ENST00000353442 USMG5Q96IX5 58 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 SCN7AQ01118 1682 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 LRCOL1A6NCL2 159 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 EFNB3Q15768 340 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 LYZL4Q96KX0 146 aa11□□□□□ -0.65
LMBR1-201ENST00000353442 MCRIP2Q9BUT9 160 aaKnown RBP11□□□□□ -0.65
LMBR1-201ENST00000353442 FAM223BA6NKX1 122 aa10.99□□□□□ -0.65
LMBR1-201ENST00000353442 LINC01590Q5TEZ4 76 aa10.99□□□□□ -0.65
LMBR1-201ENST00000353442 MRPL14Q6P1L8 145 aaKnown RBP10.99□□□□□ -0.65
LMBR1-201ENST00000353442 FAM223AQ8IWN6 122 aa10.99□□□□□ -0.65
LMBR1-201ENST00000353442 C4orf48Q5BLP8 95 aa10.99□□□□□ -0.65
LMBR1-201ENST00000353442 TIMP3P35625 211 aa10.99□□□□□ -0.65
LMBR1-201ENST00000353442 ESM1Q9NQ30 184 aa10.99□□□□□ -0.65
LMBR1-201ENST00000353442 TRAV3A0A0B4J244 114 aa10.99□□□□□ -0.65
LMBR1-201ENST00000353442 CD5P06127 495 aa10.99□□□□□ -0.65
LMBR1-201ENST00000353442 C5orf64Q2M2E5 130 aa10.99□□□□□ -0.65
LMBR1-201ENST00000353442 RTTNQ86VV8 2226 aa10.99□□□□□ -0.65
LMBR1-201ENST00000353442 CTHRC1Q96CG8 243 aa10.99□□□□□ -0.65
LMBR1-201ENST00000353442 RTBDNQ9BSG5 229 aaPredicted RBP10.99□□□□□ -0.65
LMBR1-201ENST00000353442 PPP1R3EQ9H7J1 279 aa10.99□□□□□ -0.65
LMBR1-201ENST00000353442 ZNRD1Q9P1U0 126 aa10.99□□□□□ -0.65
LMBR1-201ENST00000353442 RALGAPA1Q6GYQ0 2036 aa10.99□□□□□ -0.65
LMBR1-201ENST00000353442 MTCL1Q9Y4B5 1905 aaKnown RBP10.98□□□□□ -0.65
LMBR1-201ENST00000353442 SAMD5Q5TGI4 173 aa10.98□□□□□ -0.65
LMBR1-201ENST00000353442 SPTBP11277 2137 aa10.98□□□□□ -0.65
LMBR1-201ENST00000353442 RNASE13Q5GAN3 156 aaKnown RBP10.98□□□□□ -0.65
LMBR1-201ENST00000353442 DAZ1Q9NQZ3 744 aaKnown RBP10.98□□□□□ -0.65
LMBR1-201ENST00000353442 DUTP33316 252 aaKnown RBP10.98□□□□□ -0.65
LMBR1-201ENST00000353442 LINC00205P59089 165 aa10.98□□□□□ -0.65
LMBR1-201ENST00000353442 A6NNC1 897 aa10.98□□□□□ -0.65
LMBR1-201ENST00000353442 IGKV1D-12P01611 117 aa10.97□□□□□ -0.65
LMBR1-201ENST00000353442 TM2D1Q9BX74 207 aa10.97□□□□□ -0.65
LMBR1-201ENST00000353442 OCC1Q8TAD7 63 aa10.97□□□□□ -0.65
LMBR1-201ENST00000353442 CKAP5Q14008 2032 aa10.97□□□□□ -0.65
LMBR1-201ENST00000353442 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.97□□□□□ -0.65
LMBR1-201ENST00000353442 CD177Q8N6Q3 437 aa10.97□□□□□ -0.65
LMBR1-201ENST00000353442 IGHV3-30P01768 117 aa10.97□□□□□ -0.65
LMBR1-201ENST00000353442 IGHV3-33P01772 117 aa10.97□□□□□ -0.65
LMBR1-201ENST00000353442 IGHV3-30-3P0DP02 117 aa10.97□□□□□ -0.65
LMBR1-201ENST00000353442 IGHV3-30-5P0DP03 117 aa10.97□□□□□ -0.65
LMBR1-201ENST00000353442 RSPO3Q9BXY4 272 aaPredicted RBP10.97□□□□□ -0.65
LMBR1-201ENST00000353442 F8W735 103 aaPredicted RBP10.97□□□□□ -0.65
LMBR1-201ENST00000353442 ATP6V0E1O15342 81 aa10.97□□□□□ -0.65
LMBR1-201ENST00000353442 TBX6O95947 436 aaPredicted RBP10.97□□□□□ -0.65
LMBR1-201ENST00000353442 CCL20P78556 96 aa10.97□□□□□ -0.65
LMBR1-201ENST00000353442 PSG3Q16557 428 aa10.97□□□□□ -0.65
LMBR1-201ENST00000353442 C9orf139Q6ZV77 190 aa10.96□□□□□ -0.65
LMBR1-201ENST00000353442 TMEM158Q8WZ71 300 aa10.96□□□□□ -0.65
LMBR1-201ENST00000353442 E7EQL1 145 aa10.96□□□□□ -0.65
LMBR1-201ENST00000353442 C5orf24Q7Z6I8 188 aa10.96□□□□□ -0.65
LMBR1-201ENST00000353442 VSIRQ9H7M9 311 aa10.96□□□□□ -0.65
LMBR1-201ENST00000353442 G3V318 75 aa10.96□□□□□ -0.65
LMBR1-201ENST00000353442 CRLF1O75462 422 aa10.96□□□□□ -0.65
LMBR1-201ENST00000353442 IGLV3-21P80748 117 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms