RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Mrpl30Q9D7N6 160 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Zfp972A2AW65 139 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 1700084M14RikB1AT01 78 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Vmn1r78K7N608 313 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Fut9O88819 359 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Snrnp40Q6PE01 358 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr1211Q7TR09 311 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 TecrQ9CY27 308 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 NacaP70670 2187 aaKnown RBP10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gpr179E9PY61 2293 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Trbv5A0A0B4J1G9 113 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Ighv9-2A0A0B4J1J4 117 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm6993A0A1W2P738 69 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm5239D3YYZ2 122 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Rag2P21784 527 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Ube2l3P68037 154 aaKnown RBP10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Habp2Q8K0D2 558 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr346Q8VGJ7 309 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Rnf115Q9D0C1 305 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 CckarO08786 436 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 P18530 117 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Fosl2P47930 326 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 F13bQ07968 669 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 A930004D18RikQ8C8W7 157 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 ManfQ9CXI5 179 aaKnown RBP10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr685A0A1L1SVG7 331 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Tstd1E9PY03 133 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Foxa2P35583 459 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr1434Q7TQR9 312 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Rer1Q9CQU3 196 aaKnown RBP10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Col4a6B1AVK5 1691 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Ighv9-3A0A0B4J1J5 117 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Zfp433A0A0J9YUD4 600 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm32687A0A1W2P6H7 600 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 H2al1oL7MU04 110 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 SelplgQ62170 397 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr877Q8VF62 311 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr470Q8VF65 314 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr266Q8VFC3 316 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr1457Q8VFK3 317 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Igkv6-23A0A140T8N5 115 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Fam98cE9PYD1 344 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Khdc1bP0C7A0 126 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Dhrs9Q58NB6 319 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Hand1Q64279 216 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Fam78bQ8BQN5 261 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr577Q8VH11 312 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Klk1b27Q9JM71 263 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Nubp1Q9R060 320 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Vmn1r160E9Q346 307 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr204E9Q8M0 305 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Vmn1r123L7N270 307 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Bet1lO35153 111 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 PcolceQ61398 468 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Etfrf1Q91V16 86 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Slc31a2Q9CPU9 143 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Aurkaip1Q9DCJ7 200 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Spry4Q9WTP2 300 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Trbv15A0A0A6YYE3 115 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Wnt5aP22725 380 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Msrb2Q78J03 175 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr1042Q7TR81 313 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Asphd2Q80VP9 343 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Lrrc10Q8K3W2 274 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr830Q8VFJ5 315 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Rab29Q91YQ1 204 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Zfpl1Q9DB43 310 aa10.07□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm10645Q3UPY1 145 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Ifna12Q80SS5 189 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Rab11fip5Q8R361 645 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Insig2Q91WG1 225 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Rnase4Q9JJH1 148 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 H60bB1B212 251 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Scgb1b29D2XZ31 93 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Scgb1b20E9PWZ2 93 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr196E9PYP4 309 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Efna4O08542 206 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Smad7O35253 426 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Ccl2P10148 148 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Smim12Q78RX3 92 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr1246Q7TQZ6 314 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr508Q8VG42 310 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr124Q8VGW6 315 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Fbxl17Q9QZN1 701 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Zfp825A0A1Y7VK00 292 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm14325A2AW67 498 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Wdfy1E9Q4P1 410 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Pax2P32114 414 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Spcs3Q6ZWQ7 180 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 ClmQ7TSN2 230 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Fam206aQ80ZQ9 193 aaKnown RBP10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Rnf24Q8BGI1 148 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr1102Q8VES2 324 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Pttg1Q9CQJ7 199 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Pdzd11Q9CZG9 140 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Wbp2nlQ9D529 359 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm12728V9GX31 77 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 St6galnac2P70277 373 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Prdm6Q3UZD5 596 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Vkorc1l1Q6TEK5 176 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms