RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 GATA3P23771 443 aa16.56■□□□□ 0.24
CTDP1-208ENST00000613122 RCHY1Q96PM5 261 aa16.56■□□□□ 0.24
CTDP1-208ENST00000613122 GFI1Q99684 422 aa16.56■□□□□ 0.24
CTDP1-208ENST00000613122 DPH3P1Q9H4G8 78 aa16.56■□□□□ 0.24
CTDP1-208ENST00000613122 RPL23P62829 140 aaKnown RBP16.56■□□□□ 0.24
CTDP1-208ENST00000613122 ZNF329Q86UD4 541 aa16.56■□□□□ 0.24
CTDP1-208ENST00000613122 ESPL1Q14674 2120 aa16.56■□□□□ 0.24
CTDP1-208ENST00000613122 ADARB2-AS1A8MUL3 147 aa16.56■□□□□ 0.24
CTDP1-208ENST00000613122 MSMBP08118 114 aa16.56■□□□□ 0.24
CTDP1-208ENST00000613122 SEPSECSQ9HD40 501 aaKnown RBP16.56■□□□□ 0.24
CTDP1-208ENST00000613122 FAM223BA6NKX1 122 aa16.55■□□□□ 0.24
CTDP1-208ENST00000613122 FAM223AQ8IWN6 122 aa16.55■□□□□ 0.24
CTDP1-208ENST00000613122 TRAV5A0A0B4J249 113 aa16.55■□□□□ 0.24
CTDP1-208ENST00000613122 SAA4P35542 130 aa16.55■□□□□ 0.24
CTDP1-208ENST00000613122 CYSLTR1Q9Y271 337 aa16.55■□□□□ 0.24
CTDP1-208ENST00000613122 A6NNC1 897 aa16.55■□□□□ 0.24
CTDP1-208ENST00000613122 F2Z2F3 143 aa16.55■□□□□ 0.24
CTDP1-208ENST00000613122 ZNF688P0C7X2 276 aa16.55■□□□□ 0.24
CTDP1-208ENST00000613122 LHFPL4Q7Z7J7 247 aa16.55■□□□□ 0.24
CTDP1-208ENST00000613122 F8VVB4 439 aa16.55■□□□□ 0.24
CTDP1-208ENST00000613122 F8VWA3 439 aa16.55■□□□□ 0.24
CTDP1-208ENST00000613122 TREML4Q6UXN2 200 aa16.55■□□□□ 0.24
CTDP1-208ENST00000613122 CARHSP1Q9Y2V2 147 aaKnown RBP16.55■□□□□ 0.24
CTDP1-208ENST00000613122 CD28P10747 220 aa16.54■□□□□ 0.24
CTDP1-208ENST00000613122 IGKV1D-17A0A075B6S4 117 aa16.54■□□□□ 0.24
CTDP1-208ENST00000613122 PMS2P5A8MQ11 134 aa16.54■□□□□ 0.24
CTDP1-208ENST00000613122 SLC25A39Q9BZJ4 359 aaPredicted RBP16.54■□□□□ 0.24
CTDP1-208ENST00000613122 IGKV2-40A0A087WW87 121 aaPredicted RBP16.54■□□□□ 0.24
CTDP1-208ENST00000613122 IGKV2D-40P01614 121 aaPredicted RBP16.54■□□□□ 0.24
CTDP1-208ENST00000613122 IFITM2Q01629 132 aa16.54■□□□□ 0.24
CTDP1-208ENST00000613122 A0A087WX48 190 aa16.53■□□□□ 0.24
CTDP1-208ENST00000613122 ACTL10Q5JWF8 245 aa16.53■□□□□ 0.24
CTDP1-208ENST00000613122 Q96MF0 132 aa16.53■□□□□ 0.24
CTDP1-208ENST00000613122 OSTCQ9NRP0 149 aa16.53■□□□□ 0.24
CTDP1-208ENST00000613122 A0A087WWC5 75 aa16.53■□□□□ 0.24
CTDP1-208ENST00000613122 KLF17Q5JT82 389 aaPredicted RBP16.53■□□□□ 0.24
CTDP1-208ENST00000613122 CEP250Q9BV73 2442 aa16.53■□□□□ 0.24
CTDP1-208ENST00000613122 GFI1BQ5VTD9 330 aa16.53■□□□□ 0.24
CTDP1-208ENST00000613122 PPBPP02775 128 aa16.53■□□□□ 0.24
CTDP1-208ENST00000613122 NDPQ00604 133 aa16.53■□□□□ 0.24
CTDP1-208ENST00000613122 NPIPB5A8MRT5 1133 aa16.52■□□□□ 0.24
CTDP1-208ENST00000613122 BTCP35070 178 aa16.52■□□□□ 0.24
CTDP1-208ENST00000613122 C9orf139Q6ZV77 190 aa16.52■□□□□ 0.24
CTDP1-208ENST00000613122 GLRX5Q86SX6 157 aa16.52■□□□□ 0.24
CTDP1-208ENST00000613122 TRGV9Q99603 122 aa16.52■□□□□ 0.24
CTDP1-208ENST00000613122 SSBP4Q9BWG4 385 aaPredicted RBP16.52■□□□□ 0.24
CTDP1-208ENST00000613122 C1QTNF4Q9BXJ3 329 aa16.52■□□□□ 0.24
CTDP1-208ENST00000613122 ALPK2Q86TB3 2170 aa16.52■□□□□ 0.24
CTDP1-208ENST00000613122 SCRT1Q9BWW7 348 aa16.52■□□□□ 0.24
CTDP1-208ENST00000613122 SLC25A20O43772 301 aa16.52■□□□□ 0.24
CTDP1-208ENST00000613122 PRTN3P24158 256 aa16.52■□□□□ 0.24
CTDP1-208ENST00000613122 ORMDL2Q53FV1 153 aa16.52■□□□□ 0.24
CTDP1-208ENST00000613122 TMEM190Q8WZ59 177 aa16.52■□□□□ 0.24
CTDP1-208ENST00000613122 PGPEP1Q9NXJ5 209 aa16.52■□□□□ 0.23
CTDP1-208ENST00000613122 SIGLEC9Q9Y336 463 aa16.52■□□□□ 0.23
CTDP1-208ENST00000613122 SPTBN2O15020 2390 aa16.52■□□□□ 0.23
CTDP1-208ENST00000613122 Q6P435 159 aa16.52■□□□□ 0.23
CTDP1-208ENST00000613122 IGFL3Q6UXB1 125 aa16.52■□□□□ 0.23
CTDP1-208ENST00000613122 NAPSAO96009 420 aa16.51■□□□□ 0.23
CTDP1-208ENST00000613122 NXT2Q9NPJ8 142 aaKnown RBP16.51■□□□□ 0.23
CTDP1-208ENST00000613122 TRGV1A0A0A0MS02 117 aa16.51■□□□□ 0.23
CTDP1-208ENST00000613122 PLA2G2CQ5R387 149 aa16.51■□□□□ 0.23
CTDP1-208ENST00000613122 C5orf63A6NC05 138 aa16.51■□□□□ 0.23
CTDP1-208ENST00000613122 GHRHP01286 108 aa16.51■□□□□ 0.23
CTDP1-208ENST00000613122 DTX1Q86Y01 620 aa16.5■□□□□ 0.23
CTDP1-208ENST00000613122 PEF1Q9UBV8 284 aaKnown RBP16.5■□□□□ 0.23
CTDP1-208ENST00000613122 LY6G6FQ5SQ64 297 aa16.5■□□□□ 0.23
CTDP1-208ENST00000613122 NUDT11Q96G61 164 aa16.5■□□□□ 0.23
CTDP1-208ENST00000613122 COQ2Q96H96 371 aa16.5■□□□□ 0.23
CTDP1-208ENST00000613122 GGTLC1Q9BX51 225 aa16.5■□□□□ 0.23
CTDP1-208ENST00000613122 TRAV3A0A0B4J244 114 aa16.5■□□□□ 0.23
CTDP1-208ENST00000613122 PRB4P10163 310 aaPredicted RBP16.5■□□□□ 0.23
CTDP1-208ENST00000613122 FAM19A2Q8N3H0 131 aa16.5■□□□□ 0.23
CTDP1-208ENST00000613122 DDTP30046 118 aa16.5■□□□□ 0.23
CTDP1-208ENST00000613122 ASCL4Q6XD76 172 aa16.5■□□□□ 0.23
CTDP1-208ENST00000613122 RUSC1-AS1Q66K80 236 aa16.5■□□□□ 0.23
CTDP1-208ENST00000613122 EVI2AP22794 236 aa16.49■□□□□ 0.23
CTDP1-208ENST00000613122 MAPK1IP1LQ8NDC0 245 aa16.49■□□□□ 0.23
CTDP1-208ENST00000613122 SNAI2O43623 268 aa16.49■□□□□ 0.23
CTDP1-208ENST00000613122 FCN3O75636 299 aa16.49■□□□□ 0.23
CTDP1-208ENST00000613122 HGFACQ04756 655 aa16.49■□□□□ 0.23
CTDP1-208ENST00000613122 FXYD7P58549 80 aa16.49■□□□□ 0.23
CTDP1-208ENST00000613122 ARHGEF17Q96PE2 2063 aaPredicted RBP16.49■□□□□ 0.23
CTDP1-208ENST00000613122 TRBV6-6A0A0A6YYG2 114 aa16.49■□□□□ 0.23
CTDP1-208ENST00000613122 SRRM4A7MD48 611 aaKnown RBP16.49■□□□□ 0.23
CTDP1-208ENST00000613122 NBL1P41271 181 aa16.48■□□□□ 0.23
CTDP1-208ENST00000613122 H0YIZ8 118 aa16.48■□□□□ 0.23
CTDP1-208ENST00000613122 COL4A6Q14031 1691 aa16.48■□□□□ 0.23
CTDP1-208ENST00000613122 INSP01308 110 aa16.48■□□□□ 0.23
CTDP1-208ENST00000613122 HBDP02042 147 aa16.48■□□□□ 0.23
CTDP1-208ENST00000613122 EXOC3-AS1Q8N2X6 119 aa16.48■□□□□ 0.23
CTDP1-208ENST00000613122 WFDC1Q9HC57 220 aa16.48■□□□□ 0.23
CTDP1-208ENST00000613122 FOXL2NBQ6ZUU3 175 aa16.48■□□□□ 0.23
CTDP1-208ENST00000613122 RNF182Q8N6D2 247 aa16.48■□□□□ 0.23
CTDP1-208ENST00000613122 TRAV12-3A0A0B4J271 114 aa16.48■□□□□ 0.23
CTDP1-208ENST00000613122 APOMO95445 188 aa16.48■□□□□ 0.23
CTDP1-208ENST00000613122 ZNF138P52744 262 aa16.48■□□□□ 0.23
CTDP1-208ENST00000613122 RPL36AP83881 106 aaKnown RBP16.47■□□□□ 0.23
CTDP1-208ENST00000613122 RPL36ALQ969Q0 106 aaKnown RBP16.47■□□□□ 0.23
CTDP1-208ENST00000613122 OCC1Q8TAD7 63 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms