RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	PRR20E	P86478	221 aa		11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	PRR20C	P86479	221 aa		11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	PRR20D	P86480	221 aa		11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	PRR20B	P86481	221 aa		11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	PRR20A	P86496	221 aa		11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	HCP5	Q6MZN7	132 aa		11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	ZNF833P	Q6ZTB9	187 aa		11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	MMD2	Q8IY49	270 aa		11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	OR4B1	Q8NGF8	309 aa		11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	OR4P4	Q8NGL7	312 aa		11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	DDB2	Q92466	427 aa		11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	RPE	Q96AT9	228 aa		11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.66	□□□□□ -0.54	2e-6	■■■■■ 35.7
NR1H3-231	ENST00000529540	TRAV40	A0A0B4J280	105 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	IGHV1-69D	A0A0B4J2H0	117 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	SLC17A3	O00476	420 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	FCN1	O00602	326 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	IGHV1-69	P01742	117 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	LINC00614	P0C842	121 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	HNF1A	P20823	631 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	OR10J3	Q5JRS4	329 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	SPATA31B1P	Q5VZV4	182 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	BAGE3	Q86Y29	109 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	BAGE2	Q86Y30	109 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	OR4S2	Q8NH73	311 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	TMEM208	Q9BTX3	173 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	OSTC	Q9NRP0	149 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	TMEM167B	Q9NRX6	74 aa		11.66	□□□□□ -0.54
NR1H3-231	ENST00000529540	CSMD1	Q96PZ7	3565 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540	CENPVL3	A0A0U1RRI6	287 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540	SNURFL	B1AK76	121 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540	NPFF	O15130	113 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540	REG1A	P05451	166 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540	NPY1R	P25929	384 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540	IER3	P46695	156 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540	KLRD1	Q13241	179 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540		Q8N976	141 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540	SLC24A4	Q8NFF2	622 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540	SSMEM1	Q8WWF3	244 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540	ST6GALNAC6	Q969X2	333 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540	ZNF586	Q9NXT0	402 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540	SLC45A2	Q9UMX9	530 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540	ABCA2	Q9BZC7	2435 aa		11.65	□□□□□ -0.54
NR1H3-231	ENST00000529540	TRAV3	A0A0B4J244	114 aa		11.65	□□□□□ -0.55
NR1H3-231	ENST00000529540	FLNB	O75369	2602 aa	Known RBP	11.65	□□□□□ -0.55
NR1H3-231	ENST00000529540	GPX1	P07203	203 aa		11.65	□□□□□ -0.55
NR1H3-231	ENST00000529540	BRS3	P32247	399 aa		11.65	□□□□□ -0.55
NR1H3-231	ENST00000529540	CX3CL1	P78423	397 aa		11.65	□□□□□ -0.55
NR1H3-231	ENST00000529540	SCGB2A2	Q13296	93 aa		11.65	□□□□□ -0.55
NR1H3-231	ENST00000529540	RNF2	Q99496	336 aa		11.65	□□□□□ -0.55
NR1H3-231	ENST00000529540	SAMD10	Q9BYL1	202 aa		11.65	□□□□□ -0.55
NR1H3-231	ENST00000529540	SEPSECS	Q9HD40	501 aa	Known RBP	11.65	□□□□□ -0.55
NR1H3-231	ENST00000529540	TMEM160	Q9NX00	188 aa		11.65	□□□□□ -0.55
NR1H3-231	ENST00000529540	FBXL7	Q9UJT9	491 aa		11.65	□□□□□ -0.55
NR1H3-231	ENST00000529540	GOLT1B	Q9Y3E0	138 aa		11.65	□□□□□ -0.55
NR1H3-231	ENST00000529540	NOTCH2	Q04721	2471 aa		11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	OR5G3	P0C626	314 aa		11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	LINC00869	P0C866	280 aa		11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	GNG4	P50150	75 aa		11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	HSPE1	P61604	102 aa	Known RBP	11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	REL	Q04864	619 aa	Predicted RBP	11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	POU2AF1	Q16633	256 aa		11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	TDRG1	Q3Y452	100 aa		11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	UTF1	Q5T230	341 aa		11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	TMEM136	Q6ZRR5	245 aa		11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	SIGLECL1	Q8N7X8	197 aa		11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	SLC35E1	Q96K37	410 aa		11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	GNB4	Q9HAV0	340 aa		11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	TMEM14B	Q9NUH8	114 aa		11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	ARHGAP32	A7KAX9	2087 aa		11.64	□□□□□ -0.55
NR1H3-231	ENST00000529540	VPS13C	Q709C8	3753 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540		F2Z2F3	143 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	LY6L	H3BQJ8	138 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	APOA2	P02652	100 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	MC5R	P33032	325 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	SAA4	P35542	130 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	CTRL	P40313	264 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	DLX1	P56177	255 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	RTL8B	Q17RB0	113 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	RPL39P5	Q59GN2	51 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	CENPW	Q5EE01	88 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	OR8I2	Q8N0Y5	310 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	VN1R17P	Q8TDU5	208 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	KCNS1	Q96KK3	526 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	TMUB1	Q9BVT8	246 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	ENY2	Q9NPA8	101 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	PAM16	Q9Y3D7	125 aa		11.63	□□□□□ -0.55
NR1H3-231	ENST00000529540	ISLR	O14498	428 aa		11.62	□□□□□ -0.55
NR1H3-231	ENST00000529540	CA2	P00918	260 aa		11.62	□□□□□ -0.55
NR1H3-231	ENST00000529540	AMY1A	P04745	511 aa		11.62	□□□□□ -0.55
NR1H3-231	ENST00000529540	CD33	P20138	364 aa		11.62	□□□□□ -0.55
NR1H3-231	ENST00000529540	ATP5I	P56385	69 aa	Predicted RBP	11.62	□□□□□ -0.55
NR1H3-231	ENST00000529540	MIR17HG	Q75NE6	70 aa		11.62	□□□□□ -0.55
NR1H3-231	ENST00000529540	C19orf24	Q9BVV8	132 aa		11.62	□□□□□ -0.55
NR1H3-231	ENST00000529540	TECR	Q9NZ01	308 aa	Known RBP	11.62	□□□□□ -0.55
NR1H3-231	ENST00000529540	ITPR3	Q14573	2671 aa		11.62	□□□□□ -0.55
NR1H3-231	ENST00000529540	HELT	A6NFD8	242 aa		11.62	□□□□□ -0.55
NR1H3-231	ENST00000529540	HLA-DQA1	P01909	254 aa		11.62	□□□□□ -0.55
NR1H3-231	ENST00000529540	COL5A1-AS1	Q5SY13	56 aa		11.62	□□□□□ -0.55

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