RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 TcapO70548 167 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 OsmP53347 263 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Pip5k1aP70182 546 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Plk3Q60806 631 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Tmem56Q8CGF5 276 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr1350Q8VF34 308 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr1384Q8VFA8 318 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Sval2Q99N75 144 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Cst10Q9JM84 148 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Trav4-2A0A075B638 110 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr418A0A140T8J6 310 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Muc3E9PWP7 378 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Cpsf4lE9Q2N0 280 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr920E9Q413 310 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr556E9Q549 324 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Tesk1O70146 627 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Ucp1P12242 307 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Fcer1gP20491 86 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Rpl29P47915 160 aaKnown RBP10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Tas2r41P59532 308 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Trat1Q3UU67 187 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr139Q60891 315 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Cdkn2aQ64364 169 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Pgam5Q8BX10 288 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Acaa1bQ8VCH0 424 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Acaa1aQ921H8 424 aaKnown RBP10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Slc25a2Q99ML6 265 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Tmem126bQ9D1R1 230 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Vmn1r44Q9EQ47 310 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 NgbQ9ER97 151 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Clec4eQ9R0Q8 214 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 St6galnac3Q9WUV2 305 aa10.89□□□□□ -0.67
Nup88-203ENSMUST00000108531 Jbts17Q8CE72 3214 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 Gm19410A0A140LJC7 2098 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 H3f3cP02301 136 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 RelP15307 587 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 Hspb7P35385 169 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 Npy1rQ04573 382 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 Gm813Q3UWK9 176 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 Taar3Q5QD16 343 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 Klk1b24Q61754 263 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 Lcn10Q810Z1 182 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 Smim4Q8C1Q6 80 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr1202Q8VF98 309 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr786Q8VFH8 312 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr1054Q8VGS7 312 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 Tmem170aQ9D342 144 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 Tbx21Q9JKD8 530 aa10.88□□□□□ -0.67
Nup88-203ENSMUST00000108531 Gm14548E9Q1Z6 680 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Gm20877J3QPZ4 227 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr467L7N455 308 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Fut9O88819 359 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Smap2Q7TN29 428 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Vash2Q8C5G2 355 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Henmt1Q8CAE2 395 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Timm21Q8CCM6 249 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Pitpnc1Q8K4R4 332 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Tmem147Q9CQG6 224 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Ykt6Q9CQW1 198 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Rnf115Q9D0C1 305 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Lamtor5Q9D1L9 91 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Acp1Q9D358 158 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Tmem239Q9DA47 151 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Fcgr4A0A0B4J1G0 249 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Ctxnd1A0A1B0GST9 59 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 G530012D18RikJ3QK25 139 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr906K7N5P3 311 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Klrd1O54707 179 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Iglc2P01844 104 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 PpyP10601 100 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 LalbaP29752 143 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Hist1h1eP43274 219 aaKnown RBP10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Rab4aP56371 218 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 St8sia5P70126 412 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 MaoaQ64133 526 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 SepsecsQ6P6M7 504 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Gpr6Q6YNI2 363 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Zfp273Q7M6W8 501 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Il22ra2Q80XF5 230 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 H2-M10.6Q85ZW5 330 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Q8C708 225 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr355Q8VFP6 310 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Cldn23Q9D7D7 296 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Dda1Q9D9Z5 102 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Sumo3Q9Z172 110 aa10.87□□□□□ -0.67
Nup88-203ENSMUST00000108531 Trav6-1A0A075B5Z8 112 aa10.86□□□□□ -0.67
Nup88-203ENSMUST00000108531 Trbv12-2A0A0B4J1H1 124 aa10.86□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr465-ps1A0A0U1RPZ4 315 aa10.86□□□□□ -0.67
Nup88-203ENSMUST00000108531 Lrrc3cA0A1B0GRI5 255 aa10.86□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr918E9PVZ7 325 aa10.86□□□□□ -0.67
Nup88-203ENSMUST00000108531 TymsP07607 307 aa10.86□□□□□ -0.67
Nup88-203ENSMUST00000108531 Hist1h2bfP10853 126 aa10.86□□□□□ -0.67
Nup88-203ENSMUST00000108531 Q3UZV7 1028 aa10.86□□□□□ -0.67
Nup88-203ENSMUST00000108531 Hist1h2bbQ64475 126 aa10.86□□□□□ -0.67
Nup88-203ENSMUST00000108531 Psg22Q810J1 475 aa10.86□□□□□ -0.67
Nup88-203ENSMUST00000108531 Slc25a41Q8BVN7 312 aa10.86□□□□□ -0.67
Nup88-203ENSMUST00000108531 Prss35Q8C0F9 409 aa10.86□□□□□ -0.67
Nup88-203ENSMUST00000108531 Hist1h2bkQ8CGP1 126 aaKnown RBP10.86□□□□□ -0.67
Nup88-203ENSMUST00000108531 Hist1h2bpQ8CGP2 126 aaKnown RBP10.86□□□□□ -0.67
Nup88-203ENSMUST00000108531 Olfr1230Q8VG58 305 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 68.3 ms