RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 OR2J2O76002 312 aa1.95□□□□□ -2.1
PRKDC-208ENST00000536710 TCL1BO95988 128 aa1.95□□□□□ -2.1
PRKDC-208ENST00000536710 FKBP2P26885 142 aaKnown RBP1.95□□□□□ -2.1
PRKDC-208ENST00000536710 BASP1P80723 227 aaKnown RBP1.95□□□□□ -2.1
PRKDC-208ENST00000536710 Q6ZQT0 140 aa1.95□□□□□ -2.1
PRKDC-208ENST00000536710 DEFB128Q7Z7B8 93 aa1.95□□□□□ -2.1
PRKDC-208ENST00000536710 S100A7AQ86SG5 101 aa1.95□□□□□ -2.1
PRKDC-208ENST00000536710 SERPINI1Q99574 410 aa1.95□□□□□ -2.1
PRKDC-208ENST00000536710 RTL1A6NKG5 1358 aa1.95□□□□□ -2.1
PRKDC-208ENST00000536710 PTPRSQ13332 1948 aa1.95□□□□□ -2.1
PRKDC-208ENST00000536710 MADDQ8WXG6 1647 aa1.95□□□□□ -2.1
PRKDC-208ENST00000536710 ATP10BO94823 1461 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 GOLGA3Q08378 1498 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 KIAA2026Q5HYC2 2103 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 MYO5CQ9NQX4 1742 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 CFAP74Q9C0B2 1584 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 PRB1P04280 392 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 YPEL3P61236 119 aaPredicted RBP1.94□□□□□ -2.1
PRKDC-208ENST00000536710 ZNF846Q147U1 533 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 RHEBQ15382 184 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 OR4D11Q8NGI4 311 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 GNPDA2Q8TDQ7 276 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 C2orf50Q96LR7 162 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 ADAT1Q9BUB4 502 aaKnown RBP1.94□□□□□ -2.1
PRKDC-208ENST00000536710 TVP23BQ9NYZ1 205 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 EFCAB5A4FU69 1503 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.94□□□□□ -2.1
PRKDC-208ENST00000536710 HECW1Q76N89 1606 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 CDC42BPAQ5VT25 1732 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 NEO1Q92859 1461 aa1.94□□□□□ -2.1
PRKDC-208ENST00000536710 MDC1Q14676 2089 aaKnown RBP1.94□□□□□ -2.1
PRKDC-208ENST00000536710 KDM5CP41229 1560 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 RIMS1Q86UR5 1692 aaKnown RBP1.93□□□□□ -2.1
PRKDC-208ENST00000536710 PREX1Q8TCU6 1659 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 STRCQ7RTU9 1775 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 CPAMD8Q8IZJ3 1885 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 KIF14Q15058 1648 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 PREX2Q70Z35 1606 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 TRAV14DV4A0A0A6YYC5 116 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 ERP29P30040 261 aaKnown RBP1.93□□□□□ -2.1
PRKDC-208ENST00000536710 RHOBP62745 196 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 CDK5R1Q15078 307 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 LINC01554Q52M75 96 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 Q6Q795 121 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 C12orf45Q8N5I9 185 aaPredicted RBP1.93□□□□□ -2.1
PRKDC-208ENST00000536710 CEP19Q96LK0 163 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 SLC50A1Q9BRV3 221 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 C9orf16Q9BUW7 83 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 OPTCQ9UBM4 332 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 PCF11O94913 1555 aaKnown RBP1.93□□□□□ -2.1
PRKDC-208ENST00000536710 C3P01024 1663 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 ITSN2Q9NZM3 1697 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 KIDINS220Q9ULH0 1771 aa1.93□□□□□ -2.1
PRKDC-208ENST00000536710 RIC1Q4ADV7 1423 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 CD109Q6YHK3 1445 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 ARHGEF12Q9NZN5 1544 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 MALRD1Q5VYJ5 2156 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 ABCA6Q8N139 1617 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 CLDN25C9JDP6 229 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 CTSDP07339 412 aaPredicted RBP1.92□□□□□ -2.1
PRKDC-208ENST00000536710 COX6A1P12074 109 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 CAPZBP47756 277 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 TEX36Q5VZQ5 186 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 Q6ZSA8 131 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 ZNF826PQ6ZT77 177 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 PSTPIP2Q9H939 334 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 OR5AC2Q9NZP5 309 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 PTPRMP28827 1452 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 DIP2CQ9Y2E4 1556 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 MROH2AA6NES4 1674 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 ZNF142P52746 1687 aaPredicted RBP1.92□□□□□ -2.1
PRKDC-208ENST00000536710 MAST2Q6P0Q8 1798 aa1.92□□□□□ -2.1
PRKDC-208ENST00000536710 EEA1Q15075 1411 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 CDK13Q14004 1512 aaKnown RBP1.91□□□□□ -2.1
PRKDC-208ENST00000536710 GREB1Q4ZG55 1949 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 ADGBQ8N7X0 1667 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 PLXNC1O60486 1568 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 INO80Q9ULG1 1556 aaPredicted RBP1.91□□□□□ -2.1
PRKDC-208ENST00000536710 FANCAO15360 1455 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 MAGI2Q86UL8 1455 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 ARHGAP35Q9NRY4 1499 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 FAM159BA6NKW6 160 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 CST2P09228 141 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 HOXA6P31267 233 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 SERPINB9P50453 376 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 SURF2Q15527 256 aaPredicted RBP1.91□□□□□ -2.1
PRKDC-208ENST00000536710 TAF1AQ15573 450 aaPredicted RBP1.91□□□□□ -2.1
PRKDC-208ENST00000536710 SPANXN5Q5MJ07 72 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 LYRM7Q5U5X0 104 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 LCA10Q71F78 164 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 OR8D4Q8NGM9 314 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 GPR146Q96CH1 333 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 ABCC1P33527 1531 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 ZFYVE16Q7Z3T8 1539 aa1.91□□□□□ -2.1
PRKDC-208ENST00000536710 GLI3P10071 1580 aa1.9□□□□□ -2.1
PRKDC-208ENST00000536710 SAMD9LQ8IVG5 1584 aa1.9□□□□□ -2.1
PRKDC-208ENST00000536710 A0A087X0T9 212 aa1.9□□□□□ -2.11
PRKDC-208ENST00000536710 J3QRK9 145 aa1.9□□□□□ -2.11
PRKDC-208ENST00000536710 CYB5BO43169 146 aa1.9□□□□□ -2.11
PRKDC-208ENST00000536710 OR10X1Q8NGY0 326 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms