RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 COL8A2P25067 703 aa11.21□□□□□ -0.61
KARS-201ENST00000302445 HTR1DP28221 377 aa11.21□□□□□ -0.61
KARS-201ENST00000302445 C1orf229Q6ZS94 237 aaPredicted RBP11.21□□□□□ -0.61
KARS-201ENST00000302445 THAP8Q8NA92 274 aa11.21□□□□□ -0.61
KARS-201ENST00000302445 TCRBV4S1A1TA0A5B7 111 aa11.21□□□□□ -0.62
KARS-201ENST00000302445 SH2D7A6NKC9 451 aaPredicted RBP11.21□□□□□ -0.62
KARS-201ENST00000302445 SIVA1O15304 175 aa11.21□□□□□ -0.62
KARS-201ENST00000302445 FSTL3O95633 263 aa11.21□□□□□ -0.62
KARS-201ENST00000302445 CER1O95813 267 aa11.21□□□□□ -0.62
KARS-201ENST00000302445 LTAP01374 205 aa11.21□□□□□ -0.62
KARS-201ENST00000302445 ERHP84090 104 aaKnown RBP11.21□□□□□ -0.62
KARS-201ENST00000302445 LINC00173Q6ZV60 143 aa11.21□□□□□ -0.62
KARS-201ENST00000302445 MOB3BQ86TA1 216 aa11.21□□□□□ -0.62
KARS-201ENST00000302445 PDPNQ86YL7 162 aa11.21□□□□□ -0.62
KARS-201ENST00000302445 OR5A1Q8NGJ0 315 aa11.21□□□□□ -0.62
KARS-201ENST00000302445 GUCD1Q96NT3 240 aa11.21□□□□□ -0.62
KARS-201ENST00000302445 AP1S3Q96PC3 154 aa11.21□□□□□ -0.62
KARS-201ENST00000302445 LINC00574Q9H8X3 128 aa11.21□□□□□ -0.62
KARS-201ENST00000302445 COL27A1Q8IZC6 1860 aaPredicted RBP11.2□□□□□ -0.62
KARS-201ENST00000302445 A0A087X0K7 114 aa11.2□□□□□ -0.62
KARS-201ENST00000302445 TRAV5A0A0B4J249 113 aa11.2□□□□□ -0.62
KARS-201ENST00000302445 KBTBD11-OT1A0A1B0GTJ5 212 aa11.2□□□□□ -0.62
KARS-201ENST00000302445 A0A1B0GW15 77 aa11.2□□□□□ -0.62
KARS-201ENST00000302445 KLRC4-KLRK1H3BQV0 150 aa11.2□□□□□ -0.62
KARS-201ENST00000302445 K7EP34 96 aa11.2□□□□□ -0.62
KARS-201ENST00000302445 NDUFS8O00217 210 aa11.2□□□□□ -0.62
KARS-201ENST00000302445 CHEK1O14757 476 aa11.2□□□□□ -0.62
KARS-201ENST00000302445 C17orf58Q2M2W7 97 aa11.2□□□□□ -0.62
KARS-201ENST00000302445 MORN5Q5VZ52 161 aa11.2□□□□□ -0.62
KARS-201ENST00000302445 ZNF841Q6ZN19 808 aa11.2□□□□□ -0.62
KARS-201ENST00000302445 C5orf17Q8NAS9 161 aa11.2□□□□□ -0.62
KARS-201ENST00000302445 OSR1Q8TAX0 266 aaPredicted RBP11.2□□□□□ -0.62
KARS-201ENST00000302445 HES7Q9BYE0 225 aa11.2□□□□□ -0.62
KARS-201ENST00000302445 PYYP10082 97 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 MEOX1P50221 254 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 FOXA3P55318 350 aaPredicted RBP11.19□□□□□ -0.62
KARS-201ENST00000302445 C3AR1Q16581 482 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 PMS2CLQ68D20 193 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 Q6ZT83 130 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 NEGR1Q7Z3B1 354 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 ERASQ7Z444 233 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 OR2Z1Q8NG97 314 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 OR9G4Q8NGQ1 327 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 GTSF1Q8WW33 167 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 PERPQ96FX8 193 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 CACNA1DQ01668 2161 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.19□□□□□ -0.62
KARS-201ENST00000302445 C22orf46C9J442 243 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 FAM87AP0C7U9 286 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 HOXC12P31275 282 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 CSN1S1P47710 185 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 OR4A5Q8NH83 315 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 FAM222BQ8WU58 562 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 PLPPR2Q96GM1 343 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 SPOCK3Q9BQ16 436 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 NDUFA4L2Q9NRX3 87 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 TP73-AS1Q9UF72 201 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 TANC2Q9HCD6 1990 aa11.19□□□□□ -0.62
KARS-201ENST00000302445 TRBV6-1A0A0K0K1D8 114 aa11.18□□□□□ -0.62
KARS-201ENST00000302445 SLC25A5P05141 298 aaKnown RBP11.18□□□□□ -0.62
KARS-201ENST00000302445 SCGB1A1P11684 91 aa11.18□□□□□ -0.62
KARS-201ENST00000302445 SUB1P53999 127 aaKnown RBP eCLIP11.18□□□□□ -0.624e-13■■■■■ 30.3
KARS-201ENST00000302445 C16orf54Q6UWD8 224 aa11.18□□□□□ -0.62
KARS-201ENST00000302445 OR1B1Q8NGR6 318 aa11.18□□□□□ -0.62
KARS-201ENST00000302445 DAZAP1Q96EP5 407 aaKnown RBP11.18□□□□□ -0.62
KARS-201ENST00000302445 DSCAML1Q8TD84 2053 aa11.18□□□□□ -0.62
KARS-201ENST00000302445 LAMA1P25391 3075 aa11.18□□□□□ -0.62
KARS-201ENST00000302445 BRWD1Q9NSI6 2320 aa11.18□□□□□ -0.62
KARS-201ENST00000302445 C9orf172C9J069 976 aa11.18□□□□□ -0.62
KARS-201ENST00000302445 MYOD1P15172 320 aa11.18□□□□□ -0.62
KARS-201ENST00000302445 HSD52Q0P140 79 aa11.18□□□□□ -0.62
KARS-201ENST00000302445 PSMG4Q5JS54 123 aa11.18□□□□□ -0.62
KARS-201ENST00000302445 PATE2Q6UY27 113 aa11.18□□□□□ -0.62
KARS-201ENST00000302445 NEU4Q8WWR8 484 aaPredicted RBP11.18□□□□□ -0.62
KARS-201ENST00000302445 ZNF747Q9BV97 191 aa11.18□□□□□ -0.62
KARS-201ENST00000302445 AP5S1Q9NUS5 200 aa11.18□□□□□ -0.62
KARS-201ENST00000302445 MOSP00540 346 aa11.17□□□□□ -0.62
KARS-201ENST00000302445 APOHP02749 345 aaPredicted RBP11.17□□□□□ -0.62
KARS-201ENST00000302445 FGF6P10767 208 aa11.17□□□□□ -0.62
KARS-201ENST00000302445 TMEM11P17152 192 aa11.17□□□□□ -0.62
KARS-201ENST00000302445 HOXA4Q00056 320 aaPredicted RBP11.17□□□□□ -0.62
KARS-201ENST00000302445 TMEM177Q53S58 311 aa11.17□□□□□ -0.62
KARS-201ENST00000302445 MDS2Q8NDY4 140 aa11.17□□□□□ -0.62
KARS-201ENST00000302445 OR4X2Q8NGF9 303 aa11.17□□□□□ -0.62
KARS-201ENST00000302445 OR10AG1Q8NH19 301 aa11.17□□□□□ -0.62
KARS-201ENST00000302445 SARAFQ96BY9 339 aa11.17□□□□□ -0.62
KARS-201ENST00000302445 TM4SF5O14894 197 aa11.16□□□□□ -0.62
KARS-201ENST00000302445 IGLV1-44P01699 117 aa11.16□□□□□ -0.62
KARS-201ENST00000302445 SLC25A48Q6ZT89 311 aaKnown RBP11.16□□□□□ -0.62
KARS-201ENST00000302445 TEX45Q8NA69 505 aa11.16□□□□□ -0.62
KARS-201ENST00000302445 PGLYRP4Q96LB8 373 aa11.16□□□□□ -0.62
KARS-201ENST00000302445 FSCN3Q9NQT6 498 aa11.16□□□□□ -0.62
KARS-201ENST00000302445 DYSFO75923 2080 aa11.16□□□□□ -0.62
KARS-201ENST00000302445 TRGV5A0A0B4J1U4 118 aa11.16□□□□□ -0.62
KARS-201ENST00000302445 LYZL6O75951 148 aa11.16□□□□□ -0.62
KARS-201ENST00000302445 APOA2P02652 100 aa11.16□□□□□ -0.62
KARS-201ENST00000302445 SAA1P0DJI8 122 aaPredicted RBP11.16□□□□□ -0.62
KARS-201ENST00000302445 CT45A6P0DMU7 189 aa11.16□□□□□ -0.62
KARS-201ENST00000302445 CT45A5P0DMU8 189 aa11.16□□□□□ -0.62
KARS-201ENST00000302445 CT45A7P0DMV0 189 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms