RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 DEFB131AP59861 70 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 ADAMTSL4-AS1Q5T5F5 129 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 OR2G6Q5TZ20 316 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 THOC7Q6I9Y2 204 aaKnown RBP4.12□□□□□ -1.75
USP49-205ENST00000448078 TCF24Q7RTU0 167 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 UBAC2Q8NBM4 344 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 GGHQ92820 318 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 DGCR14Q96DF8 476 aaKnown RBP4.12□□□□□ -1.75
USP49-205ENST00000448078 SMIM19Q96E16 107 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 RNF2Q99496 336 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 CIB1Q99828 191 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 GABARAPL3Q9BY60 117 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 HRASLSQ9HDD0 168 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 C21orf62Q9NYP8 219 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 RABAC1Q9UI14 185 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 PYGO1Q9Y3Y4 419 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 AP4S1Q9Y587 144 aa4.12□□□□□ -1.75
USP49-205ENST00000448078 IGLV11-55A0A075B6I3 123 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 A0A1W2PPK0 400 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 TCRBV3S1A0A5B6 114 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 CHEK1O14757 476 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 ST8SIA3O43173 380 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 ZNF207O43670 478 aaKnown RBP4.11□□□□□ -1.75
USP49-205ENST00000448078 SCGB2A1O75556 95 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 KBTBD11O94819 623 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 S1PR2O95136 353 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 CTXN2P0C2S0 81 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 AREGP15514 252 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 HLA-GP17693 338 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 HTR2CP28335 458 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 GNRHRP30968 328 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 DUTP33316 252 aaKnown RBP4.11□□□□□ -1.75
USP49-205ENST00000448078 POLR2IP36954 125 aaKnown RBP4.11□□□□□ -1.75
USP49-205ENST00000448078 NKX2-1P43699 371 aaPredicted RBP4.11□□□□□ -1.75
USP49-205ENST00000448078 EMP1P54849 157 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 TAS2R43P59537 309 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 HERV-K104P61576 105 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 ST3GAL4Q11206 333 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 RCN1Q15293 331 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 KLK9Q2XQG4 91 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 DNAL1Q4LDG9 190 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 TTC32Q5I0X7 151 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 LEMD1Q68G75 181 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 ZNF767PQ75MW2 155 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 OR56B1Q8NGI3 324 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 TMEM167AQ8TBQ9 72 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 HSD17B10Q99714 261 aaKnown RBP4.11□□□□□ -1.75
USP49-205ENST00000448078 NIPSNAP3BQ9BS92 247 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 YTHDF1Q9BYJ9 559 aaKnown RBP4.11□□□□□ -1.75
USP49-205ENST00000448078 GABARAPL1Q9H0R8 117 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 AK3Q9UIJ7 227 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 KLK9Q9UKQ9 250 aa4.11□□□□□ -1.75
USP49-205ENST00000448078 PUS1Q9Y606 427 aaKnown RBP eCLIP4.11□□□□□ -1.75
USP49-205ENST00000448078 AGRNO00468 2067 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 TRAV8-7A0A075B6U6 113 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 TRBV6-7A0A0A0MS04 114 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 TRBV5-5A0A0J9YX44 114 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 MFSD2BA6NFX1 497 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 H7C423 109 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 TRAPPC2P0DI81 140 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 TRAPPC2BP0DI82 140 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 CELP19835 753 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 GADD45AP24522 165 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 FGF9P31371 208 aaPredicted RBP4.1□□□□□ -1.75
USP49-205ENST00000448078 AP2S1P53680 142 aaPredicted RBP4.1□□□□□ -1.75
USP49-205ENST00000448078 ARPC4P59998 168 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 PNRC1Q12796 327 aaPredicted RBP4.1□□□□□ -1.75
USP49-205ENST00000448078 CLINT1Q14677 625 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 OXA1LQ15070 435 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 PHLDA2Q53GA4 152 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 C10orf55Q5SWW7 151 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 KCTD9Q7L273 389 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 OR52I1Q8NGK6 324 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 TCTEX1D2Q8WW35 142 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 MOB3AQ96BX8 217 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 CENPNQ96H22 339 aaPredicted RBP4.1□□□□□ -1.75
USP49-205ENST00000448078 TXN2Q99757 166 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 TM2D1Q9BX74 207 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 MS4A6AQ9H2W1 248 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 AMBNQ9NP70 447 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 MED4Q9NPJ6 270 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 DAPK2Q9UIK4 370 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 RFNGQ9Y644 331 aa4.1□□□□□ -1.75
USP49-205ENST00000448078 DNAH11Q96DT5 4516 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 SNAPC5O75971 98 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 CDK1P06493 297 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 OR13C7P0DN81 318 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 NPPCP23582 126 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 OR2B8PP59922 312 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 SNRPD3P62318 126 aaKnown RBP4.09□□□□□ -1.75
USP49-205ENST00000448078 ARL6IP1Q15041 203 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 P2RY14Q15391 338 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 RAB11BQ15907 218 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 KCTD21Q4G0X4 260 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 ACTL10Q5JWF8 245 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 Q5VSD8 79 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 UBE2UQ5VVX9 321 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 OR10K2Q6IF99 312 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 TPRA1Q86W33 373 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 HOGA1Q86XE5 327 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms