RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 NBEAL1Q6ZS30 2694 aa5.56□□□□□ -1.52
BRCA1-216ENST00000484087 CMYA5Q8N3K9 4069 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 TRAV3A0A0B4J244 114 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 A0A1W2PN81 502 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 BUB1B-PAK6H3BSN5 160 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 MPDU1O75352 247 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 ACTL6BO94805 426 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 IGLV1-47P01700 117 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 IGKV1-16P04430 117 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 ARG1P05089 322 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 H2AFB1P0C5Y9 115 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 SAA1P0DJI8 122 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-216ENST00000484087 FGF7P21781 194 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 NPY1RP25929 384 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 HTR1DP28221 377 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 CHRNA7P36544 502 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 SNCAP37840 140 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 VDAC2P45880 294 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-216ENST00000484087 SUB1P53999 127 aaKnown RBP eCLIP5.55□□□□□ -1.52
BRCA1-216ENST00000484087 RPL8P62917 257 aaKnown RBP5.55□□□□□ -1.52
BRCA1-216ENST00000484087 PRCDQ00LT1 54 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 RUNX1Q01196 453 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 ARL16Q0P5N6 197 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 RBMS3Q6XE24 437 aaKnown RBP5.55□□□□□ -1.52
BRCA1-216ENST00000484087 C1orf122Q6ZSJ8 110 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 MOB3BQ86TA1 216 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 KIR3DL3Q8N743 410 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 SLC24A4Q8NFF2 622 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 OR1L8Q8NGR8 309 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 LYPD6BQ8NI32 183 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 RBMXL1Q96E39 390 aaKnown RBP5.55□□□□□ -1.52
BRCA1-216ENST00000484087 LINC00052Q96N35 136 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 KCNIP2Q9NS61 270 aa5.55□□□□□ -1.52
BRCA1-216ENST00000484087 IGHV1-3A0A0C4DH29 117 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 TMEM218A2RU14 115 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 SMCO3A2RU48 225 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 C15orf62A8K5M9 175 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 PMS2P5A8MQ11 134 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 F8W036 122 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 AGPAT2O15120 278 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 IL6RP08887 468 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-216ENST00000484087 MDKP21741 143 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-216ENST00000484087 PRTN3P24158 256 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 CD1BP29016 333 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 SAA4P35542 130 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 LGALS4P56470 323 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 RAB31Q13636 194 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 VWC2Q2TAL6 325 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 AWAT1Q58HT5 328 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 LDLRAD2Q5SZI1 272 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 CCDC144NLQ6NUI1 221 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 C12orf54Q6X4T0 127 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 C9orf139Q6ZV77 190 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 LHFPL4Q7Z7J7 247 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 HAPLN4Q86UW8 402 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 DYNAPQ8N1N2 210 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 TEX45Q8NA69 505 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 BPIFCQ8NFQ6 507 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 OR11H6Q8NGC7 330 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 TMEM167AQ8TBQ9 72 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 CCDC140Q96MF4 163 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 RNF5Q99942 180 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 RSG1Q9BU20 258 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 EIF5A2Q9GZV4 153 aaKnown RBP5.54□□□□□ -1.52
BRCA1-216ENST00000484087 SMDT1Q9H4I9 107 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 TPSG1Q9NRR2 321 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 DPM3Q9P2X0 92 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 KPTNQ9Y664 436 aa5.54□□□□□ -1.52
BRCA1-216ENST00000484087 TEX50A0A1B0GTY4 177 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 SRRM4A7MD48 611 aaKnown RBP5.53□□□□□ -1.52
BRCA1-216ENST00000484087 FNDC10F2Z333 226 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 NPFFO15130 113 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 APOC3P02656 99 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 RNASE1P07998 156 aaKnown RBP5.53□□□□□ -1.52
BRCA1-216ENST00000484087 MAS1LP35410 378 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 DLK1P80370 383 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 SCGB2A2Q13296 93 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 LY6EQ16553 131 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 GUK1Q16774 197 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 FBLN7Q53RD9 439 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 TMEM41BQ5BJD5 291 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 Q6YL49 198 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 CENPVQ7Z7K6 275 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-216ENST00000484087 MMD2Q8IY49 270 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 TEX29Q8N6K0 151 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 OR4P4Q8NGL7 312 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 SFT2D1Q8WV19 159 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 AJUBAQ96IF1 538 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 UNKLQ9H9P5 680 aaKnown RBP5.53□□□□□ -1.52
BRCA1-216ENST00000484087 NPVFQ9HCQ7 196 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 PKD1L1Q8TDX9 2849 aa5.53□□□□□ -1.52
BRCA1-216ENST00000484087 TMEM89A2RUT3 159 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 OOSP1A8MZH6 123 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 INS-IGF2F8WCM5 200 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 RRHO14718 337 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 CYB5BO43169 146 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 SLC25A17O43808 307 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 TSPAN9O75954 239 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 IFNA1P01562 189 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms