RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 SCGB2A2Q13296 93 aa11.97□□□□□ -0.49
PRPF3-201ENST00000324862 ARSJQ5FYB0 599 aaPredicted RBP11.97□□□□□ -0.49
PRPF3-201ENST00000324862 RPL7L1Q6DKI1 246 aaKnown RBP11.97□□□□□ -0.49
PRPF3-201ENST00000324862 Q6ZSV7 163 aa11.97□□□□□ -0.49
PRPF3-201ENST00000324862 TTC9CQ8N5M4 171 aa11.97□□□□□ -0.49
PRPF3-201ENST00000324862 CYTL1Q9NRR1 136 aa11.97□□□□□ -0.49
PRPF3-201ENST00000324862 ZNF355PQ9NSJ1 428 aa11.97□□□□□ -0.49
PRPF3-201ENST00000324862 CRYGCP07315 174 aa11.96□□□□□ -0.49
PRPF3-201ENST00000324862 SLC38A11Q08AI6 406 aa11.96□□□□□ -0.49
PRPF3-201ENST00000324862 OPCMLQ14982 345 aa11.96□□□□□ -0.49
PRPF3-201ENST00000324862 C19orf54Q5BKX5 351 aa11.96□□□□□ -0.49
PRPF3-201ENST00000324862 STPG2Q8N412 459 aa11.96□□□□□ -0.49
PRPF3-201ENST00000324862 OR2T6Q8NHC8 308 aa11.96□□□□□ -0.49
PRPF3-201ENST00000324862 PRSS22Q9GZN4 317 aa11.96□□□□□ -0.49
PRPF3-201ENST00000324862 RNASE1P07998 156 aaKnown RBP11.96□□□□□ -0.5
PRPF3-201ENST00000324862 AKIRIN2Q53H80 203 aa11.96□□□□□ -0.5
PRPF3-201ENST00000324862 ZNF114Q8NC26 417 aa11.96□□□□□ -0.5
PRPF3-201ENST00000324862 OR10P1Q8NGE3 313 aa11.96□□□□□ -0.5
PRPF3-201ENST00000324862 OR1P1Q8NH06 330 aa11.96□□□□□ -0.5
PRPF3-201ENST00000324862 NPIPB5A8MRT5 1133 aa11.95□□□□□ -0.5
PRPF3-201ENST00000324862 CLDN34H7C241 214 aa11.95□□□□□ -0.5
PRPF3-201ENST00000324862 AP4M1O00189 453 aa11.95□□□□□ -0.5
PRPF3-201ENST00000324862 OR2J3O76001 311 aa11.95□□□□□ -0.5
PRPF3-201ENST00000324862 IGHV3-23P01764 117 aa11.95□□□□□ -0.5
PRPF3-201ENST00000324862 PPIFP30405 207 aaKnown RBP11.95□□□□□ -0.5
PRPF3-201ENST00000324862 OPRK1P41145 380 aa11.95□□□□□ -0.5
PRPF3-201ENST00000324862 RAB11AP62491 216 aa11.95□□□□□ -0.5
PRPF3-201ENST00000324862 LILRB2Q8N423 598 aa11.95□□□□□ -0.5
PRPF3-201ENST00000324862 KLK15Q9H2R5 256 aa11.95□□□□□ -0.5
PRPF3-201ENST00000324862 A0A0D9SG52 128 aa11.95□□□□□ -0.5
PRPF3-201ENST00000324862 RPP30P78346 268 aaKnown RBP11.95□□□□□ -0.5
PRPF3-201ENST00000324862 OR1S2Q8NGQ3 325 aa11.95□□□□□ -0.5
PRPF3-201ENST00000324862 ARPC5LQ9BPX5 153 aa11.95□□□□□ -0.5
PRPF3-201ENST00000324862 ZNF471Q9BX82 626 aaPredicted RBP11.95□□□□□ -0.5
PRPF3-201ENST00000324862 SERTAD4Q9NUC0 356 aa11.95□□□□□ -0.5
PRPF3-201ENST00000324862 C2CD3Q4AC94 2353 aa11.95□□□□□ -0.5
PRPF3-201ENST00000324862 UBE2L5PA0A1B0GUS4 154 aa11.94□□□□□ -0.5
PRPF3-201ENST00000324862 SMCO3A2RU48 225 aa11.94□□□□□ -0.5
PRPF3-201ENST00000324862 BCL2L11O43521 198 aa11.94□□□□□ -0.5
PRPF3-201ENST00000324862 MT-CO2P00403 227 aa11.94□□□□□ -0.5
PRPF3-201ENST00000324862 BAXQ07812 192 aa11.94□□□□□ -0.5
PRPF3-201ENST00000324862 HSD17B13Q7Z5P4 300 aaPredicted RBP11.94□□□□□ -0.5
PRPF3-201ENST00000324862 FAM110DQ8TAY7 271 aaPredicted RBP11.94□□□□□ -0.5
PRPF3-201ENST00000324862 SRSF8Q9BRL6 282 aaKnown RBP11.94□□□□□ -0.5
PRPF3-201ENST00000324862 IGLV11-55A0A075B6I3 123 aa11.94□□□□□ -0.5
PRPF3-201ENST00000324862 KANTRA0A1W2PQU2 76 aa11.94□□□□□ -0.5
PRPF3-201ENST00000324862 MFSD2BA6NFX1 497 aa11.94□□□□□ -0.5
PRPF3-201ENST00000324862 NDUFB8O95169 186 aa11.94□□□□□ -0.5
PRPF3-201ENST00000324862 RUNX1Q01196 453 aa11.94□□□□□ -0.5
PRPF3-201ENST00000324862 TCF21O43680 179 aa11.93□□□□□ -0.5
PRPF3-201ENST00000324862 SUB1P53999 127 aaKnown RBP eCLIP11.93□□□□□ -0.54e-9■■□□□ 13.6
PRPF3-201ENST00000324862 K7EIM0 57 aa11.92□□□□□ -0.5
PRPF3-201ENST00000324862 CFDP00746 253 aaPredicted RBP11.92□□□□□ -0.5
PRPF3-201ENST00000324862 CRIP2P52943 208 aaPredicted RBP11.92□□□□□ -0.5
PRPF3-201ENST00000324862 HBG1P69891 147 aa11.92□□□□□ -0.5
PRPF3-201ENST00000324862 HBG2P69892 147 aa11.92□□□□□ -0.5
PRPF3-201ENST00000324862 CFHR3Q02985 330 aa11.92□□□□□ -0.5
PRPF3-201ENST00000324862 CD69Q07108 199 aa11.92□□□□□ -0.5
PRPF3-201ENST00000324862 GAMTQ14353 236 aa11.92□□□□□ -0.5
PRPF3-201ENST00000324862 PVRIGQ6DKI7 326 aa11.92□□□□□ -0.5
PRPF3-201ENST00000324862 MRPL41Q8IXM3 137 aaKnown RBP11.92□□□□□ -0.5
PRPF3-201ENST00000324862 HSD17B11Q8NBQ5 300 aa11.92□□□□□ -0.5
PRPF3-201ENST00000324862 ACY3Q96HD9 319 aa11.92□□□□□ -0.5
PRPF3-201ENST00000324862 IGKV1OR2-108A0A075B7D4 117 aa11.92□□□□□ -0.5
PRPF3-201ENST00000324862 I3L2K1 104 aa11.92□□□□□ -0.5
PRPF3-201ENST00000324862 Q8N2B8 174 aa11.92□□□□□ -0.5
PRPF3-201ENST00000324862 SCARB1Q8WTV0 552 aa11.92□□□□□ -0.5
PRPF3-201ENST00000324862 ATP5SQ99766 215 aa11.92□□□□□ -0.5
PRPF3-201ENST00000324862 LY86O95711 162 aa11.91□□□□□ -0.5
PRPF3-201ENST00000324862 RHOGP84095 191 aa11.91□□□□□ -0.5
PRPF3-201ENST00000324862 SLC16A13Q7RTY0 426 aa11.91□□□□□ -0.5
PRPF3-201ENST00000324862 SH3BGRL3Q9H299 93 aa11.91□□□□□ -0.5
PRPF3-201ENST00000324862 CRYBA1P05813 215 aa11.91□□□□□ -0.5
PRPF3-201ENST00000324862 TREML4Q6UXN2 200 aa11.91□□□□□ -0.5
PRPF3-201ENST00000324862 UBAC2Q8NBM4 344 aa11.91□□□□□ -0.5
PRPF3-201ENST00000324862 NPIPB3Q92617 1050 aa11.91□□□□□ -0.5
PRPF3-201ENST00000324862 FBXL7Q9UJT9 491 aa11.91□□□□□ -0.5
PRPF3-201ENST00000324862 PF4V1P10720 104 aa11.9□□□□□ -0.5
PRPF3-201ENST00000324862 C15orf32Q32M92 178 aa11.9□□□□□ -0.5
PRPF3-201ENST00000324862 RNASEH2CQ8TDP1 164 aaKnown RBP11.9□□□□□ -0.5
PRPF3-201ENST00000324862 RSG1Q9BU20 258 aa11.9□□□□□ -0.5
PRPF3-201ENST00000324862 UQCC1Q9NVA1 299 aa11.9□□□□□ -0.5
PRPF3-201ENST00000324862 TSPAN9O75954 239 aa11.9□□□□□ -0.5
PRPF3-201ENST00000324862 RND2P52198 227 aa11.9□□□□□ -0.5
PRPF3-201ENST00000324862 AKR1C1Q04828 323 aa11.9□□□□□ -0.5
PRPF3-201ENST00000324862 TMEM147Q9BVK8 224 aa11.9□□□□□ -0.5
PRPF3-201ENST00000324862 TRBV9A0A0B4J1U6 114 aa11.89□□□□□ -0.51
PRPF3-201ENST00000324862 IGLV1-40P01703 118 aa11.89□□□□□ -0.51
PRPF3-201ENST00000324862 TRGV3P03979 118 aa11.89□□□□□ -0.51
PRPF3-201ENST00000324862 IFITM2Q01629 132 aa11.89□□□□□ -0.51
PRPF3-201ENST00000324862 C11orf44Q8N8P7 122 aa11.89□□□□□ -0.51
PRPF3-201ENST00000324862 LINC01006Q8NI28 216 aa11.89□□□□□ -0.51
PRPF3-201ENST00000324862 FBN1P35555 2871 aaKnown RBP11.89□□□□□ -0.51
PRPF3-201ENST00000324862 IGHV3-11P01762 117 aa11.89□□□□□ -0.51
PRPF3-201ENST00000324862 GATA2P23769 480 aaPredicted RBP11.89□□□□□ -0.51
PRPF3-201ENST00000324862 TPPP2P59282 170 aa11.89□□□□□ -0.51
PRPF3-201ENST00000324862 VWC2Q2TAL6 325 aa11.89□□□□□ -0.51
PRPF3-201ENST00000324862 TMEM182Q6ZP80 229 aaPredicted RBP11.89□□□□□ -0.51
PRPF3-201ENST00000324862 TMEM68Q96MH6 324 aa11.89□□□□□ -0.51
PRPF3-201ENST00000324862 JMJD8Q96S16 334 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms