RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 AgerQ62151 402 aa13.32□□□□□ -0.28
Trim39-203ENSMUST00000113706 EpopQ7TNS8 369 aa13.32□□□□□ -0.28
Trim39-203ENSMUST00000113706 Dirc2Q8BFQ6 478 aa13.32□□□□□ -0.28
Trim39-203ENSMUST00000113706 Lmo1Q924W9 156 aa13.32□□□□□ -0.28
Trim39-203ENSMUST00000113706 Sdf2l1Q9ESP1 221 aa13.32□□□□□ -0.28
Trim39-203ENSMUST00000113706 Ighv5-12A0A075B5Q4 117 aa13.32□□□□□ -0.28
Trim39-203ENSMUST00000113706 Kdf1A2A9F4 397 aa13.32□□□□□ -0.28
Trim39-203ENSMUST00000113706 Polr2gP62488 172 aa13.32□□□□□ -0.28
Trim39-203ENSMUST00000113706 Taar8bQ5QD06 344 aa13.32□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr1446Q8VFX4 308 aa13.32□□□□□ -0.28
Trim39-203ENSMUST00000113706 Tmem50aQ9CXL1 157 aa13.32□□□□□ -0.28
Trim39-203ENSMUST00000113706 Tceal8Q9CZY2 117 aa13.32□□□□□ -0.28
Trim39-203ENSMUST00000113706 SdcbpO08992 299 aa13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 Mcpt8P43430 247 aa13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 Parp11Q8CFF0 331 aa13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr632Q9EPN9 317 aa13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 PbkQ9JJ78 330 aa13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 Dnajc13D4AFX7 2248 aaKnown RBP13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr92L7N475 312 aa13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 Atf6bO35451 699 aa13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 Dnase1P49183 284 aa13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 Prop1P97458 223 aa13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 Tmem18Q3TUD9 140 aa13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 Gpr55Q3UJF0 327 aa13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 Mindy2Q6PDI6 601 aa13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr1383Q7TQT2 311 aa13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 Crim1Q9JLL0 1037 aa13.31□□□□□ -0.28
Trim39-203ENSMUST00000113706 Zfp160E9Q459 650 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 H3f3cP02301 136 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Ercc1P07903 298 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 AesP63002 197 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Nars2Q8BGV0 477 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr1453Q8VFX0 307 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Msmo1Q9CRA4 293 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Golt1aQ9DCQ3 133 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 DeddQ9Z1L3 318 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Lce6aD3YV94 81 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 RelP15307 587 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Col8a2P25318 699 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 CamlgP49070 294 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Clec12bQ149M0 275 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Cln6Q3U466 308 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Q3U595 105 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Zfp799Q8BHK4 648 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Vmn1r237Q8R296 289 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Tmem205Q91XE8 189 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Hsbp1Q9CQZ1 76 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr716Q9EPG6 314 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Ighv9-2A0A0B4J1J4 117 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Gm14692A2BH01 229 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Gm5849J3QPE5 117 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Ca11O70354 328 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 P10404 641 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Nkx2-1P50220 372 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Ear1P97426 155 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Znf260Q62513 407 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 TskuQ8CBR6 354 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr830Q8VFJ5 315 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Cbln3Q9JHG0 197 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 Klk1b27Q9JM71 263 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 DscamQ9ERC8 2013 aa13.3□□□□□ -0.28
Trim39-203ENSMUST00000113706 9830107B12RikD3Z5D6 160 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Gm9972E9Q053 102 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 B4galt1P15535 399 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 FarsaQ8C0C7 508 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Nxph3Q91VX5 252 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Pnpla3Q91WW7 413 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Mansc1Q9CR33 414 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Nol3Q9D1X0 220 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Sec16aA2AIX1 2377 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Gm21117A0A087WPJ9 222 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Gm20937A0A087WQA3 222 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Gm21258A0A087WQC7 222 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Rpl29P47915 160 aaKnown RBP13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr504Q7TRU7 318 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 H1fooQ8VIK3 304 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Gins1Q9CZ15 196 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Chst1Q9EQC0 411 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Ccnl2Q9JJA7 518 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Gm3550W4VSN7 160 aa13.29□□□□□ -0.28
Trim39-203ENSMUST00000113706 Iglv3A0A0B4J1K5 122 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr1220F7BL62 311 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 C1ql1O88992 258 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Hapln4Q80WM4 400 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Acsm5Q8BGA8 578 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr1384Q8VFA8 318 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Tmbim7Q9D592 302 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Tex36Q9D5N9 219 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Cd5lQ9QWK4 352 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Cldn15Q9Z0S5 227 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Mex3aG3UYU0 520 aaKnown RBP13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Cdkn1bP46414 197 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Prrc1Q3UPH1 443 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Zfp872Q3UVL3 465 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Tox3Q80W03 575 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr638Q8VH20 321 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Dopey1Q8BL99 2399 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Lama5Q61001 3718 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr555E9Q547 315 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr1406E9Q8X1 310 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms