RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Nav2E9Q842 2432 aa17.57■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Cmya5Q70KF4 3739 aa17.57■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Tmem116A0A0G2JGD3 401 aa17.56■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Bcl2l11O54918 196 aa17.56■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 MENTQ569E4 350 aa17.56■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Lhfpl4Q5U4E0 247 aa17.56■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Q80W69 301 aa17.56■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Zg16Q8K0C5 167 aa17.56■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Ndufa2Q9CQ75 99 aa17.56■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 GmfbQ9CQI3 142 aa17.56■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Sapcd1Q9CY86 146 aa17.56■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Cd200r1Q9ES57 326 aa17.56■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Ccl8Q9Z121 97 aa17.56■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Gm5493S4R2D1 92 aa17.56■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Kcns2O35174 477 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Hoxb5P09079 269 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 GzmdP11033 252 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 KrasP32883 189 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 OsmP53347 263 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Ewsr1Q61545 655 aaKnown RBP17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Sys1Q78S06 156 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Olfr205Q7TS37 305 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Il34Q8R1R4 235 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Nfam1Q8R4V1 264 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Olfr1141Q8VFQ7 311 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Olfr1448Q8VFX1 314 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Olfr1408Q8VG32 310 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Col6a4A2AX52 2309 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Olfr587-ps1A0A1B0GSS1 159 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Gm14548E9Q1Z6 680 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 BC117090L7N257 96 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Cxcl5P50228 132 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Tmem165P52875 323 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 GferP56213 198 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Ppp1ccP63087 323 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 CcnjQ3TZI6 379 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 SelenohQ3UQA7 116 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Ifngr2Q63953 332 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Mr1Q8HWB0 341 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Q8VCE4 163 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Cst14Q8VII3 130 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Tmem218Q9CQ44 115 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Mrpl28Q9D1B9 257 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Sh2d6Q9D413 297 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Prss37Q9DAA4 237 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Tsc22d4Q9EQN3 387 aa17.55■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Trbv23A0A0A6YWQ1 115 aa17.54■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Btbd35f23A0A0R4J2B9 498 aa17.54■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Gm11756A2BEJ1 356 aa17.54■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Gm6460F6YJZ8 199 aa17.54■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 H2-M10.1O19443 331 aa17.54■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Mrpl23O35972 146 aaKnown RBP17.54■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 H2-Q10P01898 325 aa17.54■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Fcer1gP20491 86 aa17.54■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Olfr923Q7TRB9 317 aa17.54■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Olfr266Q8VFC3 316 aa17.54■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 4931428L18RikQ9D4S9 127 aa17.54■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Sh2d2aQ9QXK9 374 aa17.54■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Cml5Q9QXS8 227 aa17.54■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 CnmdQ9Z1F6 334 aa17.54■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Unc79Q0KK59 2596 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Tcrg-V5A0A0G2JGV5 113 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 BC048679D3YXE9 172 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Gm21746J3QMM6 180 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Olfr905L7N1X5 310 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Hbb-bh0P04443 147 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 CrpP14847 225 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Apoc3P33622 99 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 TaglnP37804 201 aaKnown RBP17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Nr2c2apQ3TV70 140 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 NotoQ5TIS6 240 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Traf4Q61382 470 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 C1qtnf5Q8K479 243 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 MrgprfQ8VCJ6 343 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Olfr470Q8VF65 314 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Nubp1Q9R060 320 aa17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Sptbn1Q62261 2363 aaKnown RBP17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Gcn1E9PVA8 2671 aaKnown RBP17.53■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Ighv14-3A0A075B5R9 117 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 A0A1L1SV24 88 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Gm15127B1AVZ5 449 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Gm10073E9Q3T0 114 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Tex45G3XA23 500 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Igsf6P0C6B7 237 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Dvl1P51141 695 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Ccl21aP84444 133 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Ccl21bP86792 133 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Ccl21cP86793 133 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Gm10775Q3V290 127 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Lhfpl5Q4KL25 219 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Clec4a1Q80UI7 245 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Q80VP5 184 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Ifna16Q810G1 189 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Hspa12aQ8K0U4 675 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Ubtd1Q91WB7 227 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 MthfrQ9WU20 654 aa17.52■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Hsf1P38532 525 aa17.52■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr1362Q5SZZ8 308 aa17.52■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Rbm14Q8C2Q3 669 aaKnown RBP17.52■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Fn3krpQ8K274 309 aa17.52■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms